RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 IP6K1Q92551 441 aa8.87□□□□□ -0.99
CHRNA3-204ENST00000559002 NGLY1Q96IV0 654 aa8.87□□□□□ -0.99
CHRNA3-204ENST00000559002 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
CHRNA3-204ENST00000559002 CDK12Q9NYV4 1490 aaPredicted RBP8.87□□□□□ -0.99
CHRNA3-204ENST00000559002 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
CHRNA3-204ENST00000559002 FAM83GA6ND36 823 aa8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 PHF23Q9BUL5 403 aaPredicted RBP8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 BTG4Q9NY30 223 aa8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 COL14A1Q05707 1796 aaKnown RBP8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 INSRP06213 1382 aa8.86□□□□□ -0.99
CHRNA3-204ENST00000559002 EVA1CP58658 441 aa8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 LTV1Q96GA3 475 aaPredicted RBP8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 STRN4Q9NRL3 753 aa8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 LTN1O94822 1766 aa8.85□□□□□ -0.99
CHRNA3-204ENST00000559002 DIAPH1O60610 1272 aaKnown RBP8.84□□□□□ -0.99
CHRNA3-204ENST00000559002 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
CHRNA3-204ENST00000559002 MRS2Q9HD23 443 aa8.84□□□□□ -0.99
CHRNA3-204ENST00000559002 NUDCQ9Y266 331 aa8.84□□□□□ -0.99
CHRNA3-204ENST00000559002 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
CHRNA3-204ENST00000559002 ERBB3P21860 1342 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 AFF2P51816 1311 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 MAP2P11137 1827 aaKnown RBP8.83□□□□□ -1
CHRNA3-204ENST00000559002 CCER2I3L3R5 266 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 EIF4A2Q14240 407 aaKnown RBP8.83□□□□□ -1
CHRNA3-204ENST00000559002 CCDC184Q52MB2 194 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 USP21Q9UK80 565 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 LMO7Q8WWI1 1683 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 CAMTA1Q9Y6Y1 1673 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 SLIT2O94813 1529 aa8.83□□□□□ -1
CHRNA3-204ENST00000559002 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
CHRNA3-204ENST00000559002 COL5A2P05997 1499 aaPredicted RBP8.83□□□□□ -1
CHRNA3-204ENST00000559002 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
CHRNA3-204ENST00000559002 PLCH1Q4KWH8 1693 aa8.82□□□□□ -1
CHRNA3-204ENST00000559002 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
CHRNA3-204ENST00000559002 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
CHRNA3-204ENST00000559002 TOM1L2Q6ZVM7 507 aa8.82□□□□□ -1
CHRNA3-204ENST00000559002 UNC5CLQ8IV45 518 aa8.82□□□□□ -1
CHRNA3-204ENST00000559002 FNBP4Q8N3X1 1017 aaPredicted RBP8.82□□□□□ -1
CHRNA3-204ENST00000559002 NLRP2Q9NX02 1062 aa8.82□□□□□ -1
CHRNA3-204ENST00000559002 CCDC9Q9Y3X0 531 aaKnown RBP8.82□□□□□ -1
CHRNA3-204ENST00000559002 COL18A1P39060 1754 aa8.81□□□□□ -1
CHRNA3-204ENST00000559002 IL13P35225 146 aa8.81□□□□□ -1
CHRNA3-204ENST00000559002 CRB1P82279 1406 aa8.8□□□□□ -1
CHRNA3-204ENST00000559002 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
CHRNA3-204ENST00000559002 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
CHRNA3-204ENST00000559002 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -1
CHRNA3-204ENST00000559002 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
CHRNA3-204ENST00000559002 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
CHRNA3-204ENST00000559002 BCL9LQ86UU0 1499 aa8.8□□□□□ -1
CHRNA3-204ENST00000559002 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
CHRNA3-204ENST00000559002 VPS72Q15906 364 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 USHBP1Q8N6Y0 703 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 NBPF4Q96M43 638 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 EYA1Q99502 592 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 CARD10Q9BWT7 1032 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 USP35Q9P2H5 1018 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 TRPC5Q9UL62 973 aaPredicted RBP8.79□□□□□ -1
CHRNA3-204ENST00000559002 NRAPQ86VF7 1730 aa8.79□□□□□ -1
CHRNA3-204ENST00000559002 FAM208AQ9UK61 1670 aaKnown RBP8.78□□□□□ -1
CHRNA3-204ENST00000559002 HMOX1P09601 288 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 SULT6B1Q6IMI4 303 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 TCP11L2Q8N4U5 519 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 ATRNO75882 1429 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 SPATA31A1Q5TZJ5 1347 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
CHRNA3-204ENST00000559002 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.77□□□□□ -1
CHRNA3-204ENST00000559002 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 A0A0G2JS52 829 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 NEFMP07197 916 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 MYT1Q01538 1121 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 FAM9BQ8IZU0 186 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 PNISRQ8TF01 805 aaKnown RBP8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 RAPGEF4Q8WZA2 1011 aa8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 PNNQ9H307 717 aaKnown RBP8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1.01
CHRNA3-204ENST00000559002 KDRP35968 1356 aa8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 IL2RBP14784 551 aa8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 GJD4Q96KN9 370 aaPredicted RBP8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 THRAP3Q9Y2W1 955 aaKnown RBP8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 MAPK8IP3Q9UPT6 1336 aa8.76□□□□□ -1.01
CHRNA3-204ENST00000559002 RGPD1P0DJD0 1748 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 NCAPD2Q15021 1401 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 FCHSD2O94868 740 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 PRKAR2BP31323 418 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
CHRNA3-204ENST00000559002 RBM6P78332 1123 aaKnown RBP8.74□□□□□ -1.01
CHRNA3-204ENST00000559002 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
CHRNA3-204ENST00000559002 MEGF6O75095 1541 aa8.74□□□□□ -1.01
CHRNA3-204ENST00000559002 PLEKHG2Q9H7P9 1386 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 OVOS2A0A0G2JMS6 1433 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms