RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 UTRNP46939 3433 aa10.02□□□□□ -0.81
LRRC28-207ENST00000558500 USP19O94966 1318 aa10.02□□□□□ -0.81
LRRC28-207ENST00000558500 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-207ENST00000558500 PHRF1Q9P1Y6 1649 aaKnown RBP10.01□□□□□ -0.81
LRRC28-207ENST00000558500 ABTB2Q8N961 1025 aa10.01□□□□□ -0.81
LRRC28-207ENST00000558500 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
LRRC28-207ENST00000558500 STK32BQ9NY57 414 aa10.01□□□□□ -0.81
LRRC28-207ENST00000558500 CASZ1Q86V15 1759 aa10.01□□□□□ -0.81
LRRC28-207ENST00000558500 CRB1P82279 1406 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 COL5A2P05997 1499 aaPredicted RBP10□□□□□ -0.81
LRRC28-207ENST00000558500 GCP02774 474 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 SLC15A2Q16348 729 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 DDB1Q16531 1140 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 MTFR1LQ9H019 292 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 ACEP12821 1306 aa10□□□□□ -0.81
LRRC28-207ENST00000558500 MYOM1P52179 1685 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 TXNRD1Q16881 649 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 CDK19Q9BWU1 502 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 PEAK1Q9H792 1746 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 BCL9O00512 1426 aa9.99□□□□□ -0.81
LRRC28-207ENST00000558500 GIGYF1O75420 1035 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-207ENST00000558500 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-207ENST00000558500 CCDC61Q9Y6R9 512 aa9.98□□□□□ -0.81
LRRC28-207ENST00000558500 PARP4Q9UKK3 1724 aaKnown RBP9.98□□□□□ -0.81
LRRC28-207ENST00000558500 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-207ENST00000558500 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
LRRC28-207ENST00000558500 ARXQ96QS3 562 aa9.97□□□□□ -0.81
LRRC28-207ENST00000558500 ZBTB12Q9Y330 459 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-207ENST00000558500 MAP3K5Q99683 1374 aa9.97□□□□□ -0.81
LRRC28-207ENST00000558500 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
LRRC28-207ENST00000558500 TOM1L2Q6ZVM7 507 aa9.96□□□□□ -0.82
LRRC28-207ENST00000558500 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-207ENST00000558500 KDM2AQ9Y2K7 1162 aa9.96□□□□□ -0.82
LRRC28-207ENST00000558500 AATKQ6ZMQ8 1374 aa9.96□□□□□ -0.82
LRRC28-207ENST00000558500 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
LRRC28-207ENST00000558500 GPR162Q16538 588 aa9.95□□□□□ -0.82
LRRC28-207ENST00000558500 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
LRRC28-207ENST00000558500 LRRC37A3O60309 1634 aa9.95□□□□□ -0.82
LRRC28-207ENST00000558500 FKBP8Q14318 412 aa9.94□□□□□ -0.82
LRRC28-207ENST00000558500 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
LRRC28-207ENST00000558500 ITSN1Q15811 1721 aa9.93□□□□□ -0.82
LRRC28-207ENST00000558500 BRD4O60885 1362 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-207ENST00000558500 WDR17Q8IZU2 1322 aa9.93□□□□□ -0.82
LRRC28-207ENST00000558500 NLRP6P59044 892 aa9.92□□□□□ -0.82
LRRC28-207ENST00000558500 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
LRRC28-207ENST00000558500 TOPAZ1Q8N9V7 1692 aa9.91□□□□□ -0.82
LRRC28-207ENST00000558500 CEP350Q5VT06 3117 aa9.91□□□□□ -0.82
LRRC28-207ENST00000558500 EXOC5O00471 708 aa9.91□□□□□ -0.82
LRRC28-207ENST00000558500 CARD10Q9BWT7 1032 aa9.91□□□□□ -0.82
LRRC28-207ENST00000558500 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.82
LRRC28-207ENST00000558500 ZNF827Q17R98 1081 aa9.9□□□□□ -0.82
LRRC28-207ENST00000558500 PELP1Q8IZL8 1130 aaKnown RBP9.9□□□□□ -0.82
LRRC28-207ENST00000558500 SLIT3O75094 1523 aa9.9□□□□□ -0.82
LRRC28-207ENST00000558500 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
LRRC28-207ENST00000558500 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
LRRC28-207ENST00000558500 SRPK2P78362 688 aaKnown RBP9.89□□□□□ -0.83
LRRC28-207ENST00000558500 ARHGEF25Q86VW2 580 aa9.89□□□□□ -0.83
LRRC28-207ENST00000558500 KLHL34Q8N239 644 aa9.89□□□□□ -0.83
LRRC28-207ENST00000558500 USP6P35125 1406 aa9.89□□□□□ -0.83
LRRC28-207ENST00000558500 CPSF1Q10570 1443 aaKnown RBP9.89□□□□□ -0.83
LRRC28-207ENST00000558500 ARHGEF28Q8N1W1 1705 aaKnown RBP9.88□□□□□ -0.83
LRRC28-207ENST00000558500 POLD1P28340 1107 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 SLC16A10Q8TF71 515 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 ACSBG1Q96GR2 724 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
LRRC28-207ENST00000558500 NLGN2Q8NFZ4 835 aa9.87□□□□□ -0.83
LRRC28-207ENST00000558500 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
LRRC28-207ENST00000558500 LRRC4BQ9NT99 713 aa9.87□□□□□ -0.83
LRRC28-207ENST00000558500 CABP1Q9NZU7 370 aa9.87□□□□□ -0.83
LRRC28-207ENST00000558500 CHD4Q14839 1912 aa9.87□□□□□ -0.83
LRRC28-207ENST00000558500 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
LRRC28-207ENST00000558500 GRIN3BO60391 1043 aa9.86□□□□□ -0.83
LRRC28-207ENST00000558500 KCNH5Q8NCM2 988 aa9.86□□□□□ -0.83
LRRC28-207ENST00000558500 SHANK3Q9BYB0 1731 aa9.86□□□□□ -0.83
LRRC28-207ENST00000558500 PNPLA7Q6ZV29 1317 aa9.85□□□□□ -0.83
LRRC28-207ENST00000558500 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
LRRC28-207ENST00000558500 COL18A1P39060 1754 aa9.85□□□□□ -0.83
LRRC28-207ENST00000558500 CENPJQ9HC77 1338 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-207ENST00000558500 ATP10DQ9P241 1426 aa9.84□□□□□ -0.83
LRRC28-207ENST00000558500 SOX12O15370 315 aa9.84□□□□□ -0.83
LRRC28-207ENST00000558500 HSPA6P17066 643 aa9.84□□□□□ -0.83
LRRC28-207ENST00000558500 NBPF1Q3BBV0 1214 aa9.83□□□□□ -0.84
LRRC28-207ENST00000558500 SLC27A3Q5K4L6 730 aa9.83□□□□□ -0.84
LRRC28-207ENST00000558500 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-207ENST00000558500 RAB3GAP2Q9H2M9 1393 aa9.83□□□□□ -0.84
LRRC28-207ENST00000558500 NHSQ6T4R5 1651 aa9.83□□□□□ -0.84
LRRC28-207ENST00000558500 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 ABCC6O95255 1503 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 IL2RBP14784 551 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 TFCP2L1Q9NZI6 479 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
LRRC28-207ENST00000558500 AKAP12Q02952 1782 aa9.81□□□□□ -0.84
LRRC28-207ENST00000558500 NLRP2Q9NX02 1062 aa9.81□□□□□ -0.84
LRRC28-207ENST00000558500 ERBB3P21860 1342 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms