RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 AFF2P51816 1311 aa14.18□□□□□ -0.14
LRRC28-204ENST00000558172 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-204ENST00000558172 ZNF772Q68DY9 489 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-204ENST00000558172 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
LRRC28-204ENST00000558172 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
LRRC28-204ENST00000558172 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
LRRC28-204ENST00000558172 CAMTA1Q9Y6Y1 1673 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 HOXC9P31274 260 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 EVA1CP58658 441 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-204ENST00000558172 USP21Q9UK80 565 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 FLT4P35916 1363 aa14.17□□□□□ -0.14
LRRC28-204ENST00000558172 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
LRRC28-204ENST00000558172 PEAK1Q9H792 1746 aa14.16□□□□□ -0.14
LRRC28-204ENST00000558172 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
LRRC28-204ENST00000558172 EMILIN1Q9Y6C2 1016 aa14.16□□□□□ -0.14
LRRC28-204ENST00000558172 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
LRRC28-204ENST00000558172 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
LRRC28-204ENST00000558172 INSRP06213 1382 aa14.15□□□□□ -0.14
LRRC28-204ENST00000558172 PPM1GO15355 546 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-204ENST00000558172 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-204ENST00000558172 COL5A2P05997 1499 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-204ENST00000558172 ANP32CO43423 234 aa14.14□□□□□ -0.15
LRRC28-204ENST00000558172 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
LRRC28-204ENST00000558172 MTHFSP49914 203 aa14.14□□□□□ -0.15
LRRC28-204ENST00000558172 TRPC5Q9UL62 973 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-204ENST00000558172 CDK12Q9NYV4 1490 aaPredicted RBP14.13□□□□□ -0.15
LRRC28-204ENST00000558172 VPS72Q15906 364 aa14.13□□□□□ -0.15
LRRC28-204ENST00000558172 HSP90AB2PQ58FF8 381 aa14.13□□□□□ -0.15
LRRC28-204ENST00000558172 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
LRRC28-204ENST00000558172 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
LRRC28-204ENST00000558172 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
LRRC28-204ENST00000558172 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
LRRC28-204ENST00000558172 QTRT2Q9H974 415 aaKnown RBP14.12□□□□□ -0.15
LRRC28-204ENST00000558172 ERBB3P21860 1342 aa14.12□□□□□ -0.15
LRRC28-204ENST00000558172 MYBBP1AQ9BQG0 1328 aaKnown RBP14.12□□□□□ -0.15
LRRC28-204ENST00000558172 ATRNO75882 1429 aa14.11□□□□□ -0.15
LRRC28-204ENST00000558172 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
LRRC28-204ENST00000558172 RGPD2P0DJD1 1756 aa14.11□□□□□ -0.15
LRRC28-204ENST00000558172 CRB1P82279 1406 aa14.1□□□□□ -0.15
LRRC28-204ENST00000558172 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
LRRC28-204ENST00000558172 RGS17Q9UGC6 210 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-204ENST00000558172 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
LRRC28-204ENST00000558172 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
LRRC28-204ENST00000558172 LTV1Q96GA3 475 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-204ENST00000558172 GJD4Q96KN9 370 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-204ENST00000558172 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
LRRC28-204ENST00000558172 CCDC9Q9Y3X0 531 aaKnown RBP14.09□□□□□ -0.15
LRRC28-204ENST00000558172 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
LRRC28-204ENST00000558172 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
LRRC28-204ENST00000558172 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
LRRC28-204ENST00000558172 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.16
LRRC28-204ENST00000558172 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
LRRC28-204ENST00000558172 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
LRRC28-204ENST00000558172 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
LRRC28-204ENST00000558172 NLRP2Q9NX02 1062 aa14.07□□□□□ -0.16
LRRC28-204ENST00000558172 RXRBP28702 533 aa14.06□□□□□ -0.16
LRRC28-204ENST00000558172 WNK3Q9BYP7 1800 aa14.06□□□□□ -0.16
LRRC28-204ENST00000558172 GLI3P10071 1580 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 IL13P35225 146 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 POTEAQ6S8J7 498 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 BARGINQ6ZT62 677 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 TCP11L2Q8N4U5 519 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 NUDCQ9Y266 331 aa14.05□□□□□ -0.16
LRRC28-204ENST00000558172 COL3A1P02461 1466 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-204ENST00000558172 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
LRRC28-204ENST00000558172 NBPF6Q5VWK0 638 aa14.04□□□□□ -0.16
LRRC28-204ENST00000558172 NBPF4Q96M43 638 aa14.04□□□□□ -0.16
LRRC28-204ENST00000558172 EYA1Q99502 592 aa14.04□□□□□ -0.16
LRRC28-204ENST00000558172 CDCA7Q9BWT1 371 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-204ENST00000558172 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
LRRC28-204ENST00000558172 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
LRRC28-204ENST00000558172 NCAPD2Q15021 1401 aa14.02□□□□□ -0.16
LRRC28-204ENST00000558172 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.17
LRRC28-204ENST00000558172 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
LRRC28-204ENST00000558172 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
LRRC28-204ENST00000558172 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
LRRC28-204ENST00000558172 IL2RBP14784 551 aa14□□□□□ -0.17
LRRC28-204ENST00000558172 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
LRRC28-204ENST00000558172 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
LRRC28-204ENST00000558172 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
LRRC28-204ENST00000558172 TATP17735 454 aaPredicted RBP13.99□□□□□ -0.17
LRRC28-204ENST00000558172 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
LRRC28-204ENST00000558172 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
LRRC28-204ENST00000558172 BRWD3Q6RI45 1802 aa13.99□□□□□ -0.17
LRRC28-204ENST00000558172 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
LRRC28-204ENST00000558172 KDRP35968 1356 aa13.98□□□□□ -0.17
LRRC28-204ENST00000558172 A0A0G2JS52 829 aa13.97□□□□□ -0.17
LRRC28-204ENST00000558172 EXOC5O00471 708 aa13.97□□□□□ -0.17
LRRC28-204ENST00000558172 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
LRRC28-204ENST00000558172 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.17
LRRC28-204ENST00000558172 MYT1Q01538 1121 aa13.97□□□□□ -0.17
LRRC28-204ENST00000558172 SEPT12Q8IYM1 358 aa13.97□□□□□ -0.17
LRRC28-204ENST00000558172 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
LRRC28-204ENST00000558172 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
LRRC28-204ENST00000558172 FCHSD2O94868 740 aa13.96□□□□□ -0.17
LRRC28-204ENST00000558172 WDR43Q15061 677 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRC28-204ENST00000558172 DDB1Q16531 1140 aa13.96□□□□□ -0.17
LRRC28-204ENST00000558172 MRS2Q9HD23 443 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms