RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KDM2AQ9Y2K7 1162 aa7.63□□□□□ -1.19
SPG11-208ENST00000558155 NLRP13Q86W25 1043 aa7.62□□□□□ -1.19
SPG11-208ENST00000558155 ZNF784Q8NCA9 323 aaPredicted RBP7.62□□□□□ -1.19
SPG11-208ENST00000558155 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
SPG11-208ENST00000558155 TULP4Q9NRJ4 1543 aa7.62□□□□□ -1.19
SPG11-208ENST00000558155 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 RREB1Q92766 1687 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 ACEP12821 1306 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 DCAF11Q8TEB1 546 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 CDK19Q9BWU1 502 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 CCDC61Q9Y6R9 512 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 NUP188Q5SRE5 1749 aa7.61□□□□□ -1.19
SPG11-208ENST00000558155 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 GCP02774 474 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 PRR29P0C7W0 189 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 DDB1Q16531 1140 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 ATP7BP35670 1465 aa7.6□□□□□ -1.19
SPG11-208ENST00000558155 CPDO75976 1380 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 CRYBG1Q9Y4K1 1723 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 ZBTB7AO95365 584 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 C1QTNF8P60827 252 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 SYT17Q9BSW7 474 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 STK32BQ9NY57 414 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 CAMTA1Q9Y6Y1 1673 aa7.59□□□□□ -1.19
SPG11-208ENST00000558155 ZBTB7CA1YPR0 619 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 PTGER2P43116 358 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 PROM2Q8N271 834 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 CDCA7Q9BWT1 371 aaPredicted RBP7.58□□□□□ -1.2
SPG11-208ENST00000558155 OVOS2A0A0G2JMS6 1433 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 OVOS2A0A0J9YW53 1432 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 OVOS2Q6IE36 1432 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 ITSN1Q15811 1721 aa7.58□□□□□ -1.2
SPG11-208ENST00000558155 POLR3AO14802 1390 aaPredicted RBP7.58□□□□□ -1.2
SPG11-208ENST00000558155 CHD4Q14839 1912 aa7.57□□□□□ -1.2
SPG11-208ENST00000558155 SLC15A2Q16348 729 aa7.57□□□□□ -1.2
SPG11-208ENST00000558155 FHDC1Q9C0D6 1143 aaPredicted RBP7.57□□□□□ -1.2
SPG11-208ENST00000558155 MTFR1LQ9H019 292 aa7.57□□□□□ -1.2
SPG11-208ENST00000558155 ANO8Q9HCE9 1232 aaPredicted RBP7.57□□□□□ -1.2
SPG11-208ENST00000558155 CRB1P82279 1406 aa7.57□□□□□ -1.2
SPG11-208ENST00000558155 ADGRB1O14514 1584 aa7.57□□□□□ -1.2
SPG11-208ENST00000558155 PHRF1Q9P1Y6 1649 aaKnown RBP7.56□□□□□ -1.2
SPG11-208ENST00000558155 USP19O94966 1318 aa7.56□□□□□ -1.2
SPG11-208ENST00000558155 EXOC5O00471 708 aa7.56□□□□□ -1.2
SPG11-208ENST00000558155 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
SPG11-208ENST00000558155 NLRP6P59044 892 aa7.56□□□□□ -1.2
SPG11-208ENST00000558155 TXNRD1Q16881 649 aa7.56□□□□□ -1.2
SPG11-208ENST00000558155 IFFO2Q5TF58 517 aa7.56□□□□□ -1.2
SPG11-208ENST00000558155 PDGFDQ9GZP0 370 aaPredicted RBP7.56□□□□□ -1.2
SPG11-208ENST00000558155 BRD4O60885 1362 aaPredicted RBP7.56□□□□□ -1.2
SPG11-208ENST00000558155 PARP4Q9UKK3 1724 aaKnown RBP7.55□□□□□ -1.2
SPG11-208ENST00000558155 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
SPG11-208ENST00000558155 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
SPG11-208ENST00000558155 GPR162Q16538 588 aa7.55□□□□□ -1.2
SPG11-208ENST00000558155 PTF1AQ7RTS3 328 aa7.55□□□□□ -1.2
SPG11-208ENST00000558155 MARCH10Q8NA82 808 aaPredicted RBP7.55□□□□□ -1.2
SPG11-208ENST00000558155 ARXQ96QS3 562 aa7.55□□□□□ -1.2
SPG11-208ENST00000558155 FARP1Q9Y4F1 1045 aaPredicted RBP7.55□□□□□ -1.2
SPG11-208ENST00000558155 COL5A2P05997 1499 aaPredicted RBP7.55□□□□□ -1.2
SPG11-208ENST00000558155 RGPD3A6NKT7 1758 aaPredicted RBP7.54□□□□□ -1.2
SPG11-208ENST00000558155 RGPD4Q7Z3J3 1758 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 CSB-PGBD3P0DP91 1061 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 AATKQ6ZMQ8 1374 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 NRKQ7Z2Y5 1582 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 LMO7Q8WWI1 1683 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 CASZ1Q86V15 1759 aa7.54□□□□□ -1.2
SPG11-208ENST00000558155 WDR17Q8IZU2 1322 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 BCL9O00512 1426 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
SPG11-208ENST00000558155 KCNH5Q8NCM2 988 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 SGIP1Q9BQI5 828 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
SPG11-208ENST00000558155 PEAK1Q9H792 1746 aa7.52□□□□□ -1.2
SPG11-208ENST00000558155 CABP2Q9NPB3 220 aa7.52□□□□□ -1.21
SPG11-208ENST00000558155 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
SPG11-208ENST00000558155 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
SPG11-208ENST00000558155 PPIP5K1Q6PFW1 1433 aa7.52□□□□□ -1.21
SPG11-208ENST00000558155 POLD1P28340 1107 aa7.51□□□□□ -1.21
SPG11-208ENST00000558155 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
SPG11-208ENST00000558155 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
SPG11-208ENST00000558155 ARHGEF28Q8N1W1 1705 aaKnown RBP7.51□□□□□ -1.21
SPG11-208ENST00000558155 MYOM1P52179 1685 aa7.51□□□□□ -1.21
SPG11-208ENST00000558155 MAP3K5Q99683 1374 aa7.5□□□□□ -1.21
SPG11-208ENST00000558155 PELP1Q8IZL8 1130 aaKnown RBP7.5□□□□□ -1.21
SPG11-208ENST00000558155 ACSBG1Q96GR2 724 aa7.5□□□□□ -1.21
SPG11-208ENST00000558155 CENPJQ9HC77 1338 aaPredicted RBP7.5□□□□□ -1.21
SPG11-208ENST00000558155 CCDC7Q96M83 1385 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 AKAP12Q02952 1782 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 TOPAZ1Q8N9V7 1692 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 GRIN3BO60391 1043 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 NBPF1Q3BBV0 1214 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 KLHL34Q8N239 644 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 LRRC37A3O60309 1634 aa7.49□□□□□ -1.21
SPG11-208ENST00000558155 RAB3GAP2Q9H2M9 1393 aa7.48□□□□□ -1.21
SPG11-208ENST00000558155 SOX12O15370 315 aa7.48□□□□□ -1.21
SPG11-208ENST00000558155 USP6P35125 1406 aa7.48□□□□□ -1.21
SPG11-208ENST00000558155 TTC21BQ7Z4L5 1316 aa7.48□□□□□ -1.21
SPG11-208ENST00000558155 COL18A1P39060 1754 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms