RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
GPHN-216ENST00000557678 PCMTD1Q96MG8 357 aaPredicted RBP6.94□□□□□ -1.3
GPHN-216ENST00000557678 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.94□□□□□ -1.3
GPHN-216ENST00000557678 C1QTNF2Q9BXJ5 285 aa6.94□□□□□ -1.3
GPHN-216ENST00000557678 KLF16Q9BXK1 252 aaPredicted RBP6.94□□□□□ -1.3
GPHN-216ENST00000557678 PPP2R2DQ66LE6 453 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 PDXDC2PQ6P474 469 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 IL27Q8NEV9 243 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 MAP4K5Q9Y4K4 846 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 ERBB4Q15303 1308 aa6.93□□□□□ -1.3
GPHN-216ENST00000557678 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
GPHN-216ENST00000557678 PTK2Q05397 1052 aa6.92□□□□□ -1.3
GPHN-216ENST00000557678 TRMT44Q8IYL2 757 aaKnown RBP6.92□□□□□ -1.3
GPHN-216ENST00000557678 RFC5P40937 340 aa6.91□□□□□ -1.3
GPHN-216ENST00000557678 RAB15P59190 212 aa6.91□□□□□ -1.3
GPHN-216ENST00000557678 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
GPHN-216ENST00000557678 IRF7Q92985 503 aa6.91□□□□□ -1.3
GPHN-216ENST00000557678 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
GPHN-216ENST00000557678 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
GPHN-216ENST00000557678 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
GPHN-216ENST00000557678 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
GPHN-216ENST00000557678 EPS8L1Q8TE68 723 aa6.9□□□□□ -1.3
GPHN-216ENST00000557678 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
GPHN-216ENST00000557678 ZC3H4Q9UPT8 1303 aaKnown RBP6.9□□□□□ -1.3
GPHN-216ENST00000557678 PPP1R26Q5T8A7 1209 aaPredicted RBP6.89□□□□□ -1.31
GPHN-216ENST00000557678 TSEN34Q9BSV6 310 aaKnown RBP6.89□□□□□ -1.31
GPHN-216ENST00000557678 HMX1Q9NP08 348 aaPredicted RBP6.89□□□□□ -1.31
GPHN-216ENST00000557678 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
GPHN-216ENST00000557678 CBLBQ13191 982 aa6.88□□□□□ -1.31
GPHN-216ENST00000557678 DZIP3Q86Y13 1208 aaKnown RBP6.88□□□□□ -1.31
GPHN-216ENST00000557678 NPAS3Q8IXF0 933 aa6.88□□□□□ -1.31
GPHN-216ENST00000557678 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
GPHN-216ENST00000557678 GSK3AP49840 483 aa6.87□□□□□ -1.31
GPHN-216ENST00000557678 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
GPHN-216ENST00000557678 H3BM21 787 aa6.86□□□□□ -1.31
GPHN-216ENST00000557678 NBPF20Q3BBV1 942 aa6.86□□□□□ -1.31
GPHN-216ENST00000557678 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
GPHN-216ENST00000557678 TTLL8A6PVC2 850 aa6.85□□□□□ -1.31
GPHN-216ENST00000557678 RELBQ01201 579 aa6.85□□□□□ -1.31
GPHN-216ENST00000557678 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
GPHN-216ENST00000557678 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
GPHN-216ENST00000557678 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
GPHN-216ENST00000557678 KCTD17Q8N5Z5 321 aa6.84□□□□□ -1.31
GPHN-216ENST00000557678 AGBL1Q96MI9 1066 aa6.84□□□□□ -1.31
GPHN-216ENST00000557678 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
GPHN-216ENST00000557678 DNMT3LQ9UJW3 386 aa6.84□□□□□ -1.31
GPHN-216ENST00000557678 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
GPHN-216ENST00000557678 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
GPHN-216ENST00000557678 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.83□□□□□ -1.32
GPHN-216ENST00000557678 TPRNQ4KMQ1 711 aa6.83□□□□□ -1.32
GPHN-216ENST00000557678 OCSTAMPQ9BR26 566 aa6.83□□□□□ -1.32
GPHN-216ENST00000557678 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
GPHN-216ENST00000557678 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
GPHN-216ENST00000557678 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
GPHN-216ENST00000557678 PPFIA3O75145 1194 aa6.81□□□□□ -1.32
GPHN-216ENST00000557678 Q6ZVU0 165 aa6.81□□□□□ -1.32
GPHN-216ENST00000557678 ZNF395Q9H8N7 513 aaPredicted RBP6.81□□□□□ -1.32
GPHN-216ENST00000557678 ERVH48-1M5A8F1 160 aa6.8□□□□□ -1.32
GPHN-216ENST00000557678 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
GPHN-216ENST00000557678 INSM2Q96T92 566 aaPredicted RBP6.8□□□□□ -1.32
GPHN-216ENST00000557678 TRIM34Q9BYJ4 488 aa6.8□□□□□ -1.32
GPHN-216ENST00000557678 ZBBXA8MT70 800 aa6.79□□□□□ -1.32
GPHN-216ENST00000557678 SPINT1O43278 529 aa6.79□□□□□ -1.32
GPHN-216ENST00000557678 PTSQ03393 145 aa6.79□□□□□ -1.32
GPHN-216ENST00000557678 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
GPHN-216ENST00000557678 TRIM52Q96A61 297 aa6.78□□□□□ -1.32
GPHN-216ENST00000557678 CYLDQ9NQC7 956 aa6.78□□□□□ -1.32
GPHN-216ENST00000557678 ADH1AP07327 375 aa6.77□□□□□ -1.33
GPHN-216ENST00000557678 CDC14CA4D256 554 aa6.76□□□□□ -1.33
GPHN-216ENST00000557678 GIGYF1O75420 1035 aaPredicted RBP6.76□□□□□ -1.33
GPHN-216ENST00000557678 FBXO45P0C2W1 286 aa6.76□□□□□ -1.33
GPHN-216ENST00000557678 GJD4Q96KN9 370 aaPredicted RBP6.76□□□□□ -1.33
GPHN-216ENST00000557678 ESF1Q9H501 851 aaKnown RBP6.76□□□□□ -1.33
GPHN-216ENST00000557678 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
GPHN-216ENST00000557678 ESPNB1AK53 854 aa6.75□□□□□ -1.33
GPHN-216ENST00000557678 APBB1O00213 710 aa6.75□□□□□ -1.33
GPHN-216ENST00000557678 VSIG8P0DPA2 414 aa6.75□□□□□ -1.33
GPHN-216ENST00000557678 ADD1P35611 737 aaKnown RBP6.75□□□□□ -1.33
GPHN-216ENST00000557678 CCDC155Q8N6L0 562 aa6.75□□□□□ -1.33
GPHN-216ENST00000557678 PTGIRP43119 386 aa6.74□□□□□ -1.33
GPHN-216ENST00000557678 SEPT12Q8IYM1 358 aa6.74□□□□□ -1.33
GPHN-216ENST00000557678 NDUFB9Q9Y6M9 179 aa6.74□□□□□ -1.33
GPHN-216ENST00000557678 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 MEN1O00255 615 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 LILRA1O75019 489 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 NR1H3Q13133 447 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 BANK1Q8NDB2 785 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 RNF217Q8TC41 542 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 ZNF592Q92610 1267 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 CNTNAP3Q9BZ76 1288 aa6.73□□□□□ -1.33
GPHN-216ENST00000557678 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
GPHN-216ENST00000557678 PRICKLE2Q7Z3G6 844 aa6.72□□□□□ -1.33
GPHN-216ENST00000557678 VWA5B2Q8N398 1253 aa6.72□□□□□ -1.33
GPHN-216ENST00000557678 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
GPHN-216ENST00000557678 SLC35F4A4IF30 521 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 ITGA6P23229 1130 aa6.71□□□□□ -1.34
GPHN-216ENST00000557678 KCNMA1Q12791 1236 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms