RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
PSEN1-221ENST00000557293 COL18A1P39060 1754 aa18.39■□□□□ 0.53
PSEN1-221ENST00000557293 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
PSEN1-221ENST00000557293 NLRP6P59044 892 aa18.38■□□□□ 0.53
PSEN1-221ENST00000557293 FHDC1Q9C0D6 1143 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-221ENST00000557293 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
PSEN1-221ENST00000557293 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-221ENST00000557293 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
PSEN1-221ENST00000557293 MYOM1P52179 1685 aa18.38■□□□□ 0.53
PSEN1-221ENST00000557293 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
PSEN1-221ENST00000557293 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
PSEN1-221ENST00000557293 SLIT3O75094 1523 aa18.37■□□□□ 0.53
PSEN1-221ENST00000557293 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
PSEN1-221ENST00000557293 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
PSEN1-221ENST00000557293 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
PSEN1-221ENST00000557293 USP6P35125 1406 aa18.34■□□□□ 0.53
PSEN1-221ENST00000557293 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
PSEN1-221ENST00000557293 STK32BQ9NY57 414 aa18.34■□□□□ 0.53
PSEN1-221ENST00000557293 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-221ENST00000557293 C1QTNF8P60827 252 aa18.32■□□□□ 0.52
PSEN1-221ENST00000557293 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
PSEN1-221ENST00000557293 MTFR1LQ9H019 292 aa18.32■□□□□ 0.52
PSEN1-221ENST00000557293 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-221ENST00000557293 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
PSEN1-221ENST00000557293 EXOC5O00471 708 aa18.3■□□□□ 0.52
PSEN1-221ENST00000557293 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
PSEN1-221ENST00000557293 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
PSEN1-221ENST00000557293 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
PSEN1-221ENST00000557293 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
PSEN1-221ENST00000557293 ARXQ96QS3 562 aa18.27■□□□□ 0.52
PSEN1-221ENST00000557293 CHD4Q14839 1912 aa18.27■□□□□ 0.51
PSEN1-221ENST00000557293 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
PSEN1-221ENST00000557293 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
PSEN1-221ENST00000557293 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
PSEN1-221ENST00000557293 MAP3K5Q99683 1374 aa18.25■□□□□ 0.51
PSEN1-221ENST00000557293 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
PSEN1-221ENST00000557293 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
PSEN1-221ENST00000557293 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
PSEN1-221ENST00000557293 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
PSEN1-221ENST00000557293 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
PSEN1-221ENST00000557293 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
PSEN1-221ENST00000557293 SOX12O15370 315 aa18.22■□□□□ 0.51
PSEN1-221ENST00000557293 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
PSEN1-221ENST00000557293 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
PSEN1-221ENST00000557293 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
PSEN1-221ENST00000557293 NFAT5O94916 1531 aa18.2■□□□□ 0.5
PSEN1-221ENST00000557293 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PSEN1-221ENST00000557293 NHSQ6T4R5 1651 aa18.19■□□□□ 0.5
PSEN1-221ENST00000557293 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
PSEN1-221ENST00000557293 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
PSEN1-221ENST00000557293 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
PSEN1-221ENST00000557293 UTRNP46939 3433 aa18.18■□□□□ 0.5
PSEN1-221ENST00000557293 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
PSEN1-221ENST00000557293 GPR162Q16538 588 aa18.17■□□□□ 0.5
PSEN1-221ENST00000557293 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
PSEN1-221ENST00000557293 SLC16A10Q8TF71 515 aa18.15■□□□□ 0.5
PSEN1-221ENST00000557293 IL2RBP14784 551 aa18.14■□□□□ 0.49
PSEN1-221ENST00000557293 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
PSEN1-221ENST00000557293 ERBB3P21860 1342 aa18.14■□□□□ 0.49
PSEN1-221ENST00000557293 BTAF1O14981 1849 aa18.14■□□□□ 0.49
PSEN1-221ENST00000557293 ABCC6O95255 1503 aa18.13■□□□□ 0.49
PSEN1-221ENST00000557293 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
PSEN1-221ENST00000557293 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
PSEN1-221ENST00000557293 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
PSEN1-221ENST00000557293 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
PSEN1-221ENST00000557293 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
PSEN1-221ENST00000557293 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
PSEN1-221ENST00000557293 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
PSEN1-221ENST00000557293 KCNQ4P56696 695 aa18.1■□□□□ 0.49
PSEN1-221ENST00000557293 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
PSEN1-221ENST00000557293 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
PSEN1-221ENST00000557293 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
PSEN1-221ENST00000557293 NME9Q86XW9 330 aa18.09■□□□□ 0.49
PSEN1-221ENST00000557293 ANKRD24Q8TF21 1146 aa18.09■□□□□ 0.49
PSEN1-221ENST00000557293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
PSEN1-221ENST00000557293 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
PSEN1-221ENST00000557293 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
PSEN1-221ENST00000557293 POLD1P28340 1107 aa18.07■□□□□ 0.48
PSEN1-221ENST00000557293 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
PSEN1-221ENST00000557293 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
PSEN1-221ENST00000557293 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
PSEN1-221ENST00000557293 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
PSEN1-221ENST00000557293 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
PSEN1-221ENST00000557293 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
PSEN1-221ENST00000557293 USP54Q70EL1 1684 aa18.04■□□□□ 0.48
PSEN1-221ENST00000557293 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
PSEN1-221ENST00000557293 TUBGCP6Q96RT7 1819 aa18.03■□□□□ 0.48
PSEN1-221ENST00000557293 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
PSEN1-221ENST00000557293 NSD2O96028 1365 aa18.03■□□□□ 0.48
PSEN1-221ENST00000557293 COL23A1Q86Y22 540 aaPredicted RBP18.02■□□□□ 0.48
PSEN1-221ENST00000557293 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
PSEN1-221ENST00000557293 IP6K1Q92551 441 aa18.01■□□□□ 0.47
PSEN1-221ENST00000557293 LTN1O94822 1766 aa18■□□□□ 0.47
PSEN1-221ENST00000557293 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
PSEN1-221ENST00000557293 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
PSEN1-221ENST00000557293 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
PSEN1-221ENST00000557293 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
PSEN1-221ENST00000557293 LY75O60449 1722 aa17.98■□□□□ 0.47
PSEN1-221ENST00000557293 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
PSEN1-221ENST00000557293 CEP350Q5VT06 3117 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms