RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-215ENST00000556959 MYOM1P52179 1685 aa11.7□□□□□ -0.54
SIPA1L1-215ENST00000556959 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
SIPA1L1-215ENST00000556959 KCNQ2O43526 872 aa11.69□□□□□ -0.54
SIPA1L1-215ENST00000556959 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
SIPA1L1-215ENST00000556959 AKAP12Q02952 1782 aa11.69□□□□□ -0.54
SIPA1L1-215ENST00000556959 CD163L1Q9NR16 1453 aa11.69□□□□□ -0.54
SIPA1L1-215ENST00000556959 BRD4O60885 1362 aaPredicted RBP11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 TTC21BQ7Z4L5 1316 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 NLRP6P59044 892 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 TESK2Q96S53 571 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 PPP1R1BQ9UD71 204 aaPredicted RBP11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 SLIT3O75094 1523 aa11.68□□□□□ -0.54
SIPA1L1-215ENST00000556959 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
SIPA1L1-215ENST00000556959 CRB1P82279 1406 aa11.67□□□□□ -0.54
SIPA1L1-215ENST00000556959 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
SIPA1L1-215ENST00000556959 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
SIPA1L1-215ENST00000556959 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.54
SIPA1L1-215ENST00000556959 DDB1Q16531 1140 aa11.65□□□□□ -0.54
SIPA1L1-215ENST00000556959 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
SIPA1L1-215ENST00000556959 KTN1Q86UP2 1357 aaKnown RBP11.65□□□□□ -0.55
SIPA1L1-215ENST00000556959 PTGER2P43116 358 aa11.64□□□□□ -0.55
SIPA1L1-215ENST00000556959 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
SIPA1L1-215ENST00000556959 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
SIPA1L1-215ENST00000556959 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
SIPA1L1-215ENST00000556959 AATKQ6ZMQ8 1374 aa11.64□□□□□ -0.55
SIPA1L1-215ENST00000556959 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
SIPA1L1-215ENST00000556959 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
SIPA1L1-215ENST00000556959 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
SIPA1L1-215ENST00000556959 THRAP3Q9Y2W1 955 aaKnown RBP11.63□□□□□ -0.55
SIPA1L1-215ENST00000556959 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 NFAT5O94916 1531 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 ARHGEF25Q86VW2 580 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 NME9Q86XW9 330 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 MON2Q7Z3U7 1717 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
SIPA1L1-215ENST00000556959 CHD4Q14839 1912 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 PLSCR1O15162 318 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 KCNQ4P56696 695 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 USP31Q70CQ4 1352 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 LTN1O94822 1766 aa11.61□□□□□ -0.55
SIPA1L1-215ENST00000556959 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 BTAF1O14981 1849 aa11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 USP47Q96K76 1375 aa11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 FHDC1Q9C0D6 1143 aaPredicted RBP11.6□□□□□ -0.55
SIPA1L1-215ENST00000556959 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
SIPA1L1-215ENST00000556959 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 FBLN1P23142 703 aa11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 ZNF827Q17R98 1081 aa11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 KCNH5Q8NCM2 988 aa11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
SIPA1L1-215ENST00000556959 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 SGIP1Q9BQI5 828 aa11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
SIPA1L1-215ENST00000556959 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 EXOC5O00471 708 aa11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
SIPA1L1-215ENST00000556959 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
SIPA1L1-215ENST00000556959 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
SIPA1L1-215ENST00000556959 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
SIPA1L1-215ENST00000556959 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
SIPA1L1-215ENST00000556959 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
SIPA1L1-215ENST00000556959 ABCC6O95255 1503 aa11.53□□□□□ -0.56
SIPA1L1-215ENST00000556959 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
SIPA1L1-215ENST00000556959 TMF1P82094 1093 aa11.52□□□□□ -0.57
SIPA1L1-215ENST00000556959 ERBB3P21860 1342 aa11.52□□□□□ -0.57
SIPA1L1-215ENST00000556959 BCL9O00512 1426 aa11.52□□□□□ -0.57
SIPA1L1-215ENST00000556959 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
SIPA1L1-215ENST00000556959 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
SIPA1L1-215ENST00000556959 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
SIPA1L1-215ENST00000556959 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
SIPA1L1-215ENST00000556959 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 FYB1O15117 783 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 DDX54Q8TDD1 881 aaKnown RBP11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 ANKRD24Q8TF21 1146 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 ARXQ96QS3 562 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 MAP3K19Q56UN5 1328 aa11.5□□□□□ -0.57
SIPA1L1-215ENST00000556959 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
SIPA1L1-215ENST00000556959 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms