RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CDV3Q9UKY7 258 aaKnown RBP10.83□□□□□ -0.68
HIF1A-209ENST00000556827 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
HIF1A-209ENST00000556827 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
HIF1A-209ENST00000556827 ADAM32Q8TC27 787 aa10.82□□□□□ -0.68
HIF1A-209ENST00000556827 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
HIF1A-209ENST00000556827 WFS1O76024 890 aa10.8□□□□□ -0.68
HIF1A-209ENST00000556827 UPP2O95045 317 aa10.8□□□□□ -0.68
HIF1A-209ENST00000556827 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
HIF1A-209ENST00000556827 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-209ENST00000556827 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
HIF1A-209ENST00000556827 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
HIF1A-209ENST00000556827 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
HIF1A-209ENST00000556827 MEIOBQ8N635 442 aa10.78□□□□□ -0.68
HIF1A-209ENST00000556827 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
HIF1A-209ENST00000556827 BMP2P12643 396 aa10.77□□□□□ -0.69
HIF1A-209ENST00000556827 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.69
HIF1A-209ENST00000556827 PPP1R26Q5T8A7 1209 aaPredicted RBP10.77□□□□□ -0.69
HIF1A-209ENST00000556827 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.69
HIF1A-209ENST00000556827 TERTO14746 1132 aaKnown RBP10.76□□□□□ -0.69
HIF1A-209ENST00000556827 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
HIF1A-209ENST00000556827 NFX1Q12986 1120 aaKnown RBP10.76□□□□□ -0.69
HIF1A-209ENST00000556827 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
HIF1A-209ENST00000556827 RAB15P59190 212 aa10.75□□□□□ -0.69
HIF1A-209ENST00000556827 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
HIF1A-209ENST00000556827 GJD4Q96KN9 370 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-209ENST00000556827 MAN1A2O60476 641 aa10.73□□□□□ -0.69
HIF1A-209ENST00000556827 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
HIF1A-209ENST00000556827 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
HIF1A-209ENST00000556827 TSEN34Q9BSV6 310 aaKnown RBP10.73□□□□□ -0.69
HIF1A-209ENST00000556827 SOBPA7XYQ1 873 aa10.72□□□□□ -0.69
HIF1A-209ENST00000556827 ZBBXA8MT70 800 aa10.72□□□□□ -0.69
HIF1A-209ENST00000556827 NXF1Q9UBU9 619 aaKnown RBP10.72□□□□□ -0.69
HIF1A-209ENST00000556827 APBB1O00213 710 aa10.71□□□□□ -0.69
HIF1A-209ENST00000556827 CBLBQ13191 982 aa10.71□□□□□ -0.69
HIF1A-209ENST00000556827 SLC16A10Q8TF71 515 aa10.71□□□□□ -0.69
HIF1A-209ENST00000556827 PCDHB9Q9Y5E1 797 aa10.7□□□□□ -0.7
HIF1A-209ENST00000556827 FBXO45P0C2W1 286 aa10.69□□□□□ -0.7
HIF1A-209ENST00000556827 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
HIF1A-209ENST00000556827 VEGFBP49765 207 aa10.68□□□□□ -0.7
HIF1A-209ENST00000556827 NDUFB9Q9Y6M9 179 aa10.68□□□□□ -0.7
HIF1A-209ENST00000556827 Q6ZVU0 165 aa10.67□□□□□ -0.7
HIF1A-209ENST00000556827 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
HIF1A-209ENST00000556827 SOCS7O14512 581 aa10.66□□□□□ -0.7
HIF1A-209ENST00000556827 NPAS3Q8IXF0 933 aa10.66□□□□□ -0.7
HIF1A-209ENST00000556827 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
HIF1A-209ENST00000556827 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
HIF1A-209ENST00000556827 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
HIF1A-209ENST00000556827 ZNF784Q8NCA9 323 aaPredicted RBP10.65□□□□□ -0.7
HIF1A-209ENST00000556827 TTLL8A6PVC2 850 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 ESPNB1AK53 854 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 RELBQ01201 579 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 NR1H3Q13133 447 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
HIF1A-209ENST00000556827 H3BM21 787 aa10.63□□□□□ -0.71
HIF1A-209ENST00000556827 LCE2CQ5TA81 110 aa10.63□□□□□ -0.71
HIF1A-209ENST00000556827 IRF7Q92985 503 aa10.63□□□□□ -0.71
HIF1A-209ENST00000556827 DNMT3LQ9UJW3 386 aa10.63□□□□□ -0.71
HIF1A-209ENST00000556827 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
HIF1A-209ENST00000556827 SPINT1O43278 529 aa10.62□□□□□ -0.71
HIF1A-209ENST00000556827 ZNF592Q92610 1267 aa10.62□□□□□ -0.71
HIF1A-209ENST00000556827 WIPF1O43516 503 aa10.61□□□□□ -0.71
HIF1A-209ENST00000556827 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
HIF1A-209ENST00000556827 CYLDQ9NQC7 956 aa10.61□□□□□ -0.71
HIF1A-209ENST00000556827 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
HIF1A-209ENST00000556827 GIGYF1O75420 1035 aaPredicted RBP10.6□□□□□ -0.71
HIF1A-209ENST00000556827 ADH1AP07327 375 aa10.6□□□□□ -0.71
HIF1A-209ENST00000556827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.71
HIF1A-209ENST00000556827 PRM3Q9NNZ6 103 aa10.6□□□□□ -0.71
HIF1A-209ENST00000556827 GPR37L1O60883 481 aa10.59□□□□□ -0.71
HIF1A-209ENST00000556827 INSM2Q96T92 566 aaPredicted RBP10.59□□□□□ -0.71
HIF1A-209ENST00000556827 POLMQ9NP87 494 aaPredicted RBP10.59□□□□□ -0.71
HIF1A-209ENST00000556827 LILRA1O75019 489 aa10.58□□□□□ -0.72
HIF1A-209ENST00000556827 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
HIF1A-209ENST00000556827 INSM1Q01101 510 aaPredicted RBP10.58□□□□□ -0.72
HIF1A-209ENST00000556827 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
HIF1A-209ENST00000556827 TBC1D2BQ9UPU7 963 aa10.58□□□□□ -0.72
HIF1A-209ENST00000556827 GMPRP36959 345 aa10.57□□□□□ -0.72
HIF1A-209ENST00000556827 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
HIF1A-209ENST00000556827 ERBB4Q15303 1308 aa10.57□□□□□ -0.72
HIF1A-209ENST00000556827 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
HIF1A-209ENST00000556827 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
HIF1A-209ENST00000556827 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
HIF1A-209ENST00000556827 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
HIF1A-209ENST00000556827 PTGIRP43119 386 aa10.54□□□□□ -0.72
HIF1A-209ENST00000556827 PTSQ03393 145 aa10.53□□□□□ -0.72
HIF1A-209ENST00000556827 PCDHB11Q9Y5F2 797 aa10.53□□□□□ -0.72
HIF1A-209ENST00000556827 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
HIF1A-209ENST00000556827 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
HIF1A-209ENST00000556827 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
HIF1A-209ENST00000556827 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
HIF1A-209ENST00000556827 RNF217Q8TC41 542 aa10.51□□□□□ -0.73
HIF1A-209ENST00000556827 VSIG8P0DPA2 414 aa10.5□□□□□ -0.73
HIF1A-209ENST00000556827 KDF1Q8NAX2 398 aaPredicted RBP10.5□□□□□ -0.73
HIF1A-209ENST00000556827 ABL2P42684 1182 aa10.49□□□□□ -0.73
HIF1A-209ENST00000556827 ERVK-9P63128 1117 aa10.49□□□□□ -0.73
HIF1A-209ENST00000556827 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
HIF1A-209ENST00000556827 GDPD2Q9HCC8 539 aa10.49□□□□□ -0.73
HIF1A-209ENST00000556827 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
HIF1A-209ENST00000556827 MEN1O00255 615 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms