RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 GDPD2Q9HCC8 539 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 GOLGA6AQ9NYA3 693 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 MAFGO15525 162 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 HOXA2O43364 376 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 NDUFB5O43674 189 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CREB3O43889 395 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 MSNP26038 577 aaKnown RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 ANKRD45Q5TZF3 282 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCDC174Q6PII3 467 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 TNIP3Q96KP6 325 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 FAM117AQ9C073 453 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 TERF2IPQ9NYB0 399 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ARIH1Q9Y4X5 557 aaPredicted RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 CEP83Q9Y592 693 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 DYTNA2CJ06 578 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SPDYE2BA6NHP3 402 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 EIF3JO75822 258 aaKnown RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 SPDYE6P0CI01 402 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ZNF131P52739 623 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 MDM2Q00987 491 aaPredicted RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 UBE4AQ14139 1066 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 BMS1Q14692 1282 aaKnown RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 PDCD2Q16342 344 aaPredicted RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 PTPROQ16827 1216 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SPDYE2Q495Y8 402 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CFAP58Q5T655 872 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ARL10Q8N8L6 244 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 PPME1Q9Y570 386 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SPDYE5A6NIY4 337 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 PPFIA3O75145 1194 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ARID5AQ03989 594 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ZBTB17Q13105 803 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SF3B2Q13435 895 aaKnown RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 APBB1IPQ7Z5R6 666 aaPredicted RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCDC191Q8NCU4 936 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SLC4A7Q9Y6M7 1214 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCP110O43303 1012 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 COPB2P35606 906 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 NUBP1P53384 320 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCDC92Q53HC0 331 aaPredicted RBP2.22□□□□□ -2.05
KTN1-224ENST00000556631 HSP90AB3PQ58FF7 597 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 MSL1Q68DK7 614 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 ZNF280DQ6N043 979 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCDC70Q6NSX1 233 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 EP400NLQ6ZTU2 488 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 TMCO5AQ8N6Q1 288 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 TRIM5Q9C035 493 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 TSPYL1Q9H0U9 437 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 NEUROD4Q9HD90 331 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 CCDC39Q9UFE4 941 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 RCAN3Q9UKA8 241 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 HDAC9Q9UKV0 1011 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 BRPF3Q9ULD4 1205 aa2.22□□□□□ -2.05
KTN1-224ENST00000556631 SPDYE16A6NNV3 312 aaPredicted RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 GBP2P32456 591 aaPredicted RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 PRPHP41219 470 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 AGERQ15109 404 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 HSP90AA5PQ58FG0 334 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 TMCO3Q6UWJ1 677 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 ARMCX6Q7L4S7 300 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 DRC7Q8IY82 874 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 RDH13Q8NBN7 331 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CDC5LQ99459 802 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 PRKAG2Q9UGJ0 569 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 AFG3L2Q9Y4W6 797 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 IRX3P78415 501 aaPredicted RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 CALD1Q05682 793 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 BICDL1Q6ZP65 573 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 MAATS1Q7Z4T9 603 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 NOP9Q86U38 636 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 OSCARQ8IYS5 282 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 MICALL1Q8N3F8 863 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 RTF1Q92541 710 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 MPP4Q96JB8 637 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 STAC3Q96MF2 364 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 MAP7D2Q96T17 732 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CCDC113Q9H0I3 377 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 PNMA2Q9UL42 364 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 USP8P40818 1118 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CDR1P51861 262 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 PLIN5Q00G26 463 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 C1QBPQ07021 282 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 GPS2Q13227 327 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 TAF12Q16514 161 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CADPS2Q86UW7 1296 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 FAM200AQ8TCP9 573 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 JDP2Q8WYK2 163 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 GLMNQ92990 594 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.21□□□□□ -2.061e-7■□□□□ 9.6
KTN1-224ENST00000556631 SPC25Q9HBM1 224 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 PABPN1LA6NDY0 278 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 PSMA7O14818 248 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CLK2P49760 499 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 PRPF4BQ13523 1007 aaKnown RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 INF2Q27J81 1249 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 SLFNL1Q499Z3 407 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 GRIPAP1Q4V328 841 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 IFFO2Q5TF58 517 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 PDCL2Q8N4E4 241 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 RGS22Q8NE09 1264 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms