RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CPDO75976 1380 aa23.6■■□□□ 1.37
TUBB3-211ENST00000556536 CHRNA2Q15822 529 aa23.58■■□□□ 1.37
TUBB3-211ENST00000556536 USP21Q9UK80 565 aa23.58■■□□□ 1.37
TUBB3-211ENST00000556536 TRPC5Q9UL62 973 aaPredicted RBP23.58■■□□□ 1.37
TUBB3-211ENST00000556536 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
TUBB3-211ENST00000556536 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
TUBB3-211ENST00000556536 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
TUBB3-211ENST00000556536 MTHFSP49914 203 aa23.55■■□□□ 1.36
TUBB3-211ENST00000556536 EP400Q96L91 3159 aa23.54■■□□□ 1.36
TUBB3-211ENST00000556536 SMG6Q86US8 1419 aaKnown RBP23.54■■□□□ 1.36
TUBB3-211ENST00000556536 AMPHP49418 695 aa23.54■■□□□ 1.36
TUBB3-211ENST00000556536 FNBP4Q8N3X1 1017 aaPredicted RBP23.54■■□□□ 1.36
TUBB3-211ENST00000556536 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
TUBB3-211ENST00000556536 AXIN2Q9Y2T1 843 aa23.53■■□□□ 1.36
TUBB3-211ENST00000556536 HOXC9P31274 260 aa23.52■■□□□ 1.36
TUBB3-211ENST00000556536 IP6K1Q92551 441 aa23.52■■□□□ 1.36
TUBB3-211ENST00000556536 ATRNO75882 1429 aa23.51■■□□□ 1.35
TUBB3-211ENST00000556536 PEAK1Q9H792 1746 aa23.51■■□□□ 1.35
TUBB3-211ENST00000556536 RTL1A6NKG5 1358 aa23.51■■□□□ 1.35
TUBB3-211ENST00000556536 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
TUBB3-211ENST00000556536 FLT4P35916 1363 aa23.5■■□□□ 1.35
TUBB3-211ENST00000556536 KIF24Q5T7B8 1368 aa23.49■■□□□ 1.35
TUBB3-211ENST00000556536 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
TUBB3-211ENST00000556536 BTG4Q9NY30 223 aa23.48■■□□□ 1.35
TUBB3-211ENST00000556536 LTN1O94822 1766 aa23.47■■□□□ 1.35
TUBB3-211ENST00000556536 COL18A1P39060 1754 aa23.47■■□□□ 1.35
TUBB3-211ENST00000556536 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
TUBB3-211ENST00000556536 COL14A1Q05707 1796 aaKnown RBP23.46■■□□□ 1.35
TUBB3-211ENST00000556536 MIER1Q8N108 512 aa23.46■■□□□ 1.35
TUBB3-211ENST00000556536 LMO7Q8WWI1 1683 aa23.46■■□□□ 1.35
TUBB3-211ENST00000556536 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
TUBB3-211ENST00000556536 ABCC6O95255 1503 aa23.45■■□□□ 1.34
TUBB3-211ENST00000556536 INSRP06213 1382 aa23.45■■□□□ 1.34
TUBB3-211ENST00000556536 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
TUBB3-211ENST00000556536 SLIT2O94813 1529 aa23.44■■□□□ 1.34
TUBB3-211ENST00000556536 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
TUBB3-211ENST00000556536 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
TUBB3-211ENST00000556536 ANKRD24Q8TF21 1146 aa23.44■■□□□ 1.34
TUBB3-211ENST00000556536 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
TUBB3-211ENST00000556536 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
TUBB3-211ENST00000556536 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
TUBB3-211ENST00000556536 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
TUBB3-211ENST00000556536 COL5A2P05997 1499 aaPredicted RBP23.42■■□□□ 1.34
TUBB3-211ENST00000556536 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
TUBB3-211ENST00000556536 ERBB3P21860 1342 aa23.4■■□□□ 1.34
TUBB3-211ENST00000556536 EVA1CP58658 441 aa23.4■■□□□ 1.34
TUBB3-211ENST00000556536 PLCH1Q4KWH8 1693 aa23.4■■□□□ 1.34
TUBB3-211ENST00000556536 IL13P35225 146 aa23.39■■□□□ 1.33
TUBB3-211ENST00000556536 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.33
TUBB3-211ENST00000556536 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.33
TUBB3-211ENST00000556536 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
TUBB3-211ENST00000556536 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
TUBB3-211ENST00000556536 CSB-PGBD3P0DP91 1061 aa23.37■■□□□ 1.33
TUBB3-211ENST00000556536 WDR17Q8IZU2 1322 aa23.36■■□□□ 1.33
TUBB3-211ENST00000556536 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
TUBB3-211ENST00000556536 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
TUBB3-211ENST00000556536 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
TUBB3-211ENST00000556536 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
TUBB3-211ENST00000556536 NRAPQ86VF7 1730 aa23.35■■□□□ 1.33
TUBB3-211ENST00000556536 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
TUBB3-211ENST00000556536 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
TUBB3-211ENST00000556536 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
TUBB3-211ENST00000556536 TOM1L2Q6ZVM7 507 aa23.33■■□□□ 1.33
TUBB3-211ENST00000556536 EYA1Q99502 592 aa23.33■■□□□ 1.33
TUBB3-211ENST00000556536 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
TUBB3-211ENST00000556536 USHBP1Q8N6Y0 703 aa23.32■■□□□ 1.32
TUBB3-211ENST00000556536 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
TUBB3-211ENST00000556536 VPS72Q15906 364 aa23.31■■□□□ 1.32
TUBB3-211ENST00000556536 CRB1P82279 1406 aa23.31■■□□□ 1.32
TUBB3-211ENST00000556536 CARD10Q9BWT7 1032 aa23.3■■□□□ 1.32
TUBB3-211ENST00000556536 NUDCQ9Y266 331 aa23.3■■□□□ 1.32
TUBB3-211ENST00000556536 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
TUBB3-211ENST00000556536 USP35Q9P2H5 1018 aa23.29■■□□□ 1.32
TUBB3-211ENST00000556536 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
TUBB3-211ENST00000556536 SPATA31A5Q5VU36 1347 aa23.29■■□□□ 1.32
TUBB3-211ENST00000556536 SPATA31A7Q8IWB4 1347 aa23.29■■□□□ 1.32
TUBB3-211ENST00000556536 GLI3P10071 1580 aa23.28■■□□□ 1.32
TUBB3-211ENST00000556536 AEBP1Q8IUX7 1158 aa23.28■■□□□ 1.32
TUBB3-211ENST00000556536 SPATA31A1Q5TZJ5 1347 aa23.28■■□□□ 1.32
TUBB3-211ENST00000556536 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
TUBB3-211ENST00000556536 HMOX1P09601 288 aa23.26■■□□□ 1.31
TUBB3-211ENST00000556536 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
TUBB3-211ENST00000556536 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
TUBB3-211ENST00000556536 SULT6B1Q6IMI4 303 aa23.26■■□□□ 1.31
TUBB3-211ENST00000556536 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
TUBB3-211ENST00000556536 RGPD1P0DJD0 1748 aa23.25■■□□□ 1.31
TUBB3-211ENST00000556536 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
TUBB3-211ENST00000556536 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
TUBB3-211ENST00000556536 SF3B2Q13435 895 aaKnown RBP23.23■■□□□ 1.31
TUBB3-211ENST00000556536 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
TUBB3-211ENST00000556536 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
TUBB3-211ENST00000556536 FAM208AQ9UK61 1670 aaKnown RBP23.22■■□□□ 1.31
TUBB3-211ENST00000556536 KDRP35968 1356 aa23.22■■□□□ 1.31
TUBB3-211ENST00000556536 RSPH6AQ9H0K4 717 aa23.21■■□□□ 1.31
TUBB3-211ENST00000556536 BRWD3Q6RI45 1802 aa23.2■■□□□ 1.3
TUBB3-211ENST00000556536 DEFB132Q7Z7B7 95 aa23.2■■□□□ 1.3
TUBB3-211ENST00000556536 THRAP3Q9Y2W1 955 aaKnown RBP23.2■■□□□ 1.3
TUBB3-211ENST00000556536 FAM98CQ17RN3 349 aaKnown RBP23.19■■□□□ 1.3
TUBB3-211ENST00000556536 FAM9BQ8IZU0 186 aa23.19■■□□□ 1.3
TUBB3-211ENST00000556536 LRP5O75197 1615 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms