RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
TGFB3-204ENST00000556285 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
TGFB3-204ENST00000556285 LTN1O94822 1766 aa19■□□□□ 0.63
TGFB3-204ENST00000556285 USP54Q70EL1 1684 aa18.99■□□□□ 0.63
TGFB3-204ENST00000556285 OVOS2A0A0G2JMS6 1433 aa18.99■□□□□ 0.63
TGFB3-204ENST00000556285 OVOS2A0A0J9YW53 1432 aa18.99■□□□□ 0.63
TGFB3-204ENST00000556285 OVOS2Q6IE36 1432 aa18.99■□□□□ 0.63
TGFB3-204ENST00000556285 SOX12O15370 315 aa18.98■□□□□ 0.63
TGFB3-204ENST00000556285 ZNF692Q9BU19 519 aaPredicted RBP18.97■□□□□ 0.63
TGFB3-204ENST00000556285 ANO8Q9HCE9 1232 aaPredicted RBP18.97■□□□□ 0.63
TGFB3-204ENST00000556285 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
TGFB3-204ENST00000556285 CD163L1Q9NR16 1453 aa18.96■□□□□ 0.63
TGFB3-204ENST00000556285 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
TGFB3-204ENST00000556285 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
TGFB3-204ENST00000556285 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
TGFB3-204ENST00000556285 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
TGFB3-204ENST00000556285 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
TGFB3-204ENST00000556285 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
TGFB3-204ENST00000556285 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
TGFB3-204ENST00000556285 DDB1Q16531 1140 aa18.93■□□□□ 0.62
TGFB3-204ENST00000556285 PROM2Q8N271 834 aa18.93■□□□□ 0.62
TGFB3-204ENST00000556285 SBNO2Q9Y2G9 1366 aa18.93■□□□□ 0.62
TGFB3-204ENST00000556285 MYOM1P52179 1685 aa18.92■□□□□ 0.62
TGFB3-204ENST00000556285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
TGFB3-204ENST00000556285 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
TGFB3-204ENST00000556285 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
TGFB3-204ENST00000556285 NME9Q86XW9 330 aa18.9■□□□□ 0.62
TGFB3-204ENST00000556285 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
TGFB3-204ENST00000556285 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
TGFB3-204ENST00000556285 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.61
TGFB3-204ENST00000556285 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 BTAF1O14981 1849 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 PLSCR1O15162 318 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 CSB-PGBD3P0DP91 1061 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 NBPF14Q5TI25 921 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 BCL9O00512 1426 aa18.88■□□□□ 0.61
TGFB3-204ENST00000556285 ABCC6O95255 1503 aa18.87■□□□□ 0.61
TGFB3-204ENST00000556285 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
TGFB3-204ENST00000556285 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
TGFB3-204ENST00000556285 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
TGFB3-204ENST00000556285 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
TGFB3-204ENST00000556285 KCNQ2O43526 872 aa18.86■□□□□ 0.61
TGFB3-204ENST00000556285 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
TGFB3-204ENST00000556285 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
TGFB3-204ENST00000556285 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
TGFB3-204ENST00000556285 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.61
TGFB3-204ENST00000556285 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
TGFB3-204ENST00000556285 A0A1W2PP64 1363 aa18.82■□□□□ 0.6
TGFB3-204ENST00000556285 C11orf95C9JLR9 678 aaPredicted RBP18.82■□□□□ 0.6
TGFB3-204ENST00000556285 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
TGFB3-204ENST00000556285 TESK2Q96S53 571 aa18.82■□□□□ 0.6
TGFB3-204ENST00000556285 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
TGFB3-204ENST00000556285 ERBB3P21860 1342 aa18.81■□□□□ 0.6
TGFB3-204ENST00000556285 EDC4Q6P2E9 1401 aaKnown RBP18.81■□□□□ 0.6
TGFB3-204ENST00000556285 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
TGFB3-204ENST00000556285 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
TGFB3-204ENST00000556285 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
TGFB3-204ENST00000556285 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
TGFB3-204ENST00000556285 TXNRD1Q16881 649 aa18.8■□□□□ 0.6
TGFB3-204ENST00000556285 ACSBG1Q96GR2 724 aa18.8■□□□□ 0.6
TGFB3-204ENST00000556285 EXOC5O00471 708 aa18.79■□□□□ 0.6
TGFB3-204ENST00000556285 PTGER2P43116 358 aa18.79■□□□□ 0.6
TGFB3-204ENST00000556285 NLRP2Q9NX02 1062 aa18.79■□□□□ 0.6
TGFB3-204ENST00000556285 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
TGFB3-204ENST00000556285 PPP1R1BQ9UD71 204 aaPredicted RBP18.78■□□□□ 0.6
TGFB3-204ENST00000556285 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
TGFB3-204ENST00000556285 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
TGFB3-204ENST00000556285 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.6
TGFB3-204ENST00000556285 PUS7Q96PZ0 661 aaKnown RBP18.77■□□□□ 0.6
TGFB3-204ENST00000556285 YY1P25490 414 aa18.76■□□□□ 0.59
TGFB3-204ENST00000556285 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
TGFB3-204ENST00000556285 FBLN1P23142 703 aa18.75■□□□□ 0.59
TGFB3-204ENST00000556285 SLC15A2Q16348 729 aa18.75■□□□□ 0.59
TGFB3-204ENST00000556285 UTRNP46939 3433 aa18.75■□□□□ 0.59
TGFB3-204ENST00000556285 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
TGFB3-204ENST00000556285 QSER1Q2KHR3 1735 aa18.74■□□□□ 0.59
TGFB3-204ENST00000556285 SGIP1Q9BQI5 828 aa18.73■□□□□ 0.59
TGFB3-204ENST00000556285 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
TGFB3-204ENST00000556285 LY75O60449 1722 aa18.72■□□□□ 0.59
TGFB3-204ENST00000556285 IL2RBP14784 551 aa18.72■□□□□ 0.59
TGFB3-204ENST00000556285 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
TGFB3-204ENST00000556285 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
TGFB3-204ENST00000556285 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
TGFB3-204ENST00000556285 IP6K1Q92551 441 aa18.71■□□□□ 0.59
TGFB3-204ENST00000556285 STK32BQ9NY57 414 aa18.71■□□□□ 0.59
TGFB3-204ENST00000556285 CHD4Q14839 1912 aa18.7■□□□□ 0.58
TGFB3-204ENST00000556285 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
TGFB3-204ENST00000556285 COG3Q96JB2 828 aa18.68■□□□□ 0.58
TGFB3-204ENST00000556285 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
TGFB3-204ENST00000556285 USP47Q96K76 1375 aa18.68■□□□□ 0.58
TGFB3-204ENST00000556285 KIF20BQ96Q89 1820 aa18.67■□□□□ 0.58
TGFB3-204ENST00000556285 KCNQ4P56696 695 aa18.67■□□□□ 0.58
TGFB3-204ENST00000556285 MEGF6O75095 1541 aa18.67■□□□□ 0.58
TGFB3-204ENST00000556285 NSD2O96028 1365 aa18.67■□□□□ 0.58
TGFB3-204ENST00000556285 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
TGFB3-204ENST00000556285 HOXC9P31274 260 aa18.66■□□□□ 0.58
TGFB3-204ENST00000556285 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
TGFB3-204ENST00000556285 GGNBP2Q9H3C7 697 aa18.65■□□□□ 0.58
TGFB3-204ENST00000556285 FYB1O15117 783 aa18.64■□□□□ 0.57
TGFB3-204ENST00000556285 TMF1P82094 1093 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms