RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 SLIT2O94813 1529 aa15.53■□□□□ 0.08
GABRB3-210ENST00000556166 AFF2P51816 1311 aa15.53■□□□□ 0.08
GABRB3-210ENST00000556166 SMG6Q86US8 1419 aaKnown RBP15.52■□□□□ 0.08
GABRB3-210ENST00000556166 PEAK1Q9H792 1746 aa15.52■□□□□ 0.08
GABRB3-210ENST00000556166 BCL9LQ86UU0 1499 aa15.52■□□□□ 0.08
GABRB3-210ENST00000556166 COL18A1P39060 1754 aa15.52■□□□□ 0.08
GABRB3-210ENST00000556166 ANP32CO43423 234 aa15.52■□□□□ 0.07
GABRB3-210ENST00000556166 LTV1Q96GA3 475 aaPredicted RBP15.51■□□□□ 0.07
GABRB3-210ENST00000556166 LARP1Q6PKG0 1096 aaKnown RBP15.5■□□□□ 0.07
GABRB3-210ENST00000556166 UNC5CLQ8IV45 518 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 USP21Q9UK80 565 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
GABRB3-210ENST00000556166 RTL1A6NKG5 1358 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 INSRP06213 1382 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 FLT4P35916 1363 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 KIF24Q5T7B8 1368 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 LMO7Q8WWI1 1683 aa15.5■□□□□ 0.07
GABRB3-210ENST00000556166 CCDC184Q52MB2 194 aa15.49■□□□□ 0.07
GABRB3-210ENST00000556166 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
GABRB3-210ENST00000556166 EVA1CP58658 441 aa15.49■□□□□ 0.07
GABRB3-210ENST00000556166 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
GABRB3-210ENST00000556166 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
GABRB3-210ENST00000556166 MAP2P11137 1827 aaKnown RBP15.48■□□□□ 0.07
GABRB3-210ENST00000556166 COL5A2P05997 1499 aaPredicted RBP15.48■□□□□ 0.07
GABRB3-210ENST00000556166 ERBB3P21860 1342 aa15.48■□□□□ 0.07
GABRB3-210ENST00000556166 BLMP54132 1417 aaPredicted RBP15.47■□□□□ 0.07
GABRB3-210ENST00000556166 IL13P35225 146 aa15.47■□□□□ 0.07
GABRB3-210ENST00000556166 LTN1O94822 1766 aa15.47■□□□□ 0.07
GABRB3-210ENST00000556166 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
GABRB3-210ENST00000556166 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
GABRB3-210ENST00000556166 MIER1Q8N108 512 aa15.46■□□□□ 0.07
GABRB3-210ENST00000556166 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
GABRB3-210ENST00000556166 ABCC6O95255 1503 aa15.46■□□□□ 0.07
GABRB3-210ENST00000556166 WDR17Q8IZU2 1322 aa15.45■□□□□ 0.06
GABRB3-210ENST00000556166 VPS72Q15906 364 aa15.45■□□□□ 0.06
GABRB3-210ENST00000556166 QTRT2Q9H974 415 aaKnown RBP15.45■□□□□ 0.06
GABRB3-210ENST00000556166 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
GABRB3-210ENST00000556166 CSB-PGBD3P0DP91 1061 aa15.45■□□□□ 0.06
GABRB3-210ENST00000556166 POTEAQ6S8J7 498 aa15.45■□□□□ 0.06
GABRB3-210ENST00000556166 EYA1Q99502 592 aa15.45■□□□□ 0.06
GABRB3-210ENST00000556166 SPATA31A5Q5VU36 1347 aa15.44■□□□□ 0.06
GABRB3-210ENST00000556166 SPATA31A7Q8IWB4 1347 aa15.44■□□□□ 0.06
GABRB3-210ENST00000556166 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
GABRB3-210ENST00000556166 NLRP2Q9NX02 1062 aa15.44■□□□□ 0.06
GABRB3-210ENST00000556166 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
GABRB3-210ENST00000556166 RGPD5Q99666 1765 aa15.43■□□□□ 0.06
GABRB3-210ENST00000556166 ZNF772Q68DY9 489 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-210ENST00000556166 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
GABRB3-210ENST00000556166 USHBP1Q8N6Y0 703 aa15.43■□□□□ 0.06
GABRB3-210ENST00000556166 ATRNO75882 1429 aa15.43■□□□□ 0.06
GABRB3-210ENST00000556166 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
GABRB3-210ENST00000556166 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
GABRB3-210ENST00000556166 CARD10Q9BWT7 1032 aa15.42■□□□□ 0.06
GABRB3-210ENST00000556166 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
GABRB3-210ENST00000556166 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
GABRB3-210ENST00000556166 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
GABRB3-210ENST00000556166 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-210ENST00000556166 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-210ENST00000556166 NWD2Q9ULI1 1742 aa15.41■□□□□ 0.06
GABRB3-210ENST00000556166 CRB1P82279 1406 aa15.41■□□□□ 0.06
GABRB3-210ENST00000556166 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
GABRB3-210ENST00000556166 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
GABRB3-210ENST00000556166 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
GABRB3-210ENST00000556166 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
GABRB3-210ENST00000556166 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
GABRB3-210ENST00000556166 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
GABRB3-210ENST00000556166 NCAPD2Q15021 1401 aa15.37■□□□□ 0.05
GABRB3-210ENST00000556166 ONECUT3O60422 494 aaPredicted RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 HMOX1P09601 288 aa15.36■□□□□ 0.05
GABRB3-210ENST00000556166 FAM98CQ17RN3 349 aaKnown RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
GABRB3-210ENST00000556166 PNISRQ8TF01 805 aaKnown RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
GABRB3-210ENST00000556166 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 RBM6P78332 1123 aaKnown RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
GABRB3-210ENST00000556166 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
GABRB3-210ENST00000556166 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
GABRB3-210ENST00000556166 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
GABRB3-210ENST00000556166 RXRBP28702 533 aa15.35■□□□□ 0.05
GABRB3-210ENST00000556166 GLI3P10071 1580 aa15.35■□□□□ 0.05
GABRB3-210ENST00000556166 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
GABRB3-210ENST00000556166 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
GABRB3-210ENST00000556166 KDRP35968 1356 aa15.34■□□□□ 0.05
GABRB3-210ENST00000556166 DISP2A7MBM2 1401 aa15.33■□□□□ 0.05
GABRB3-210ENST00000556166 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.05
GABRB3-210ENST00000556166 RGPD1P0DJD0 1748 aa15.33■□□□□ 0.04
GABRB3-210ENST00000556166 IL2RBP14784 551 aa15.32■□□□□ 0.04
GABRB3-210ENST00000556166 FAM208AQ9UK61 1670 aaKnown RBP15.32■□□□□ 0.04
GABRB3-210ENST00000556166 MEGF6O75095 1541 aa15.32■□□□□ 0.04
GABRB3-210ENST00000556166 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
GABRB3-210ENST00000556166 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
GABRB3-210ENST00000556166 FCHSD2O94868 740 aa15.31■□□□□ 0.04
GABRB3-210ENST00000556166 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
GABRB3-210ENST00000556166 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
GABRB3-210ENST00000556166 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
GABRB3-210ENST00000556166 TATP17735 454 aaPredicted RBP15.29■□□□□ 0.04
GABRB3-210ENST00000556166 WDR43Q15061 677 aaKnown RBP eCLIP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms