RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OVOS2Q6IE36 1432 aa20.7■□□□□ 0.9
CHMP4BP1-201ENST00000556017 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
CHMP4BP1-201ENST00000556017 USP54Q70EL1 1684 aa20.7■□□□□ 0.9
CHMP4BP1-201ENST00000556017 WDR17Q8IZU2 1322 aa20.68■□□□□ 0.9
CHMP4BP1-201ENST00000556017 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
CHMP4BP1-201ENST00000556017 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
CHMP4BP1-201ENST00000556017 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
CHMP4BP1-201ENST00000556017 CASZ1Q86V15 1759 aa20.67■□□□□ 0.9
CHMP4BP1-201ENST00000556017 MARCH10Q8NA82 808 aaPredicted RBP20.66■□□□□ 0.9
CHMP4BP1-201ENST00000556017 BCL9O00512 1426 aa20.66■□□□□ 0.9
CHMP4BP1-201ENST00000556017 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
CHMP4BP1-201ENST00000556017 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
CHMP4BP1-201ENST00000556017 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.89
CHMP4BP1-201ENST00000556017 PLSCR1O15162 318 aa20.64■□□□□ 0.89
CHMP4BP1-201ENST00000556017 DDB1Q16531 1140 aa20.64■□□□□ 0.89
CHMP4BP1-201ENST00000556017 PROM2Q8N271 834 aa20.64■□□□□ 0.89
CHMP4BP1-201ENST00000556017 ANO8Q9HCE9 1232 aaPredicted RBP20.64■□□□□ 0.89
CHMP4BP1-201ENST00000556017 TTC21AQ8NDW8 1320 aa20.63■□□□□ 0.89
CHMP4BP1-201ENST00000556017 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
CHMP4BP1-201ENST00000556017 ABCC6O95255 1503 aa20.63■□□□□ 0.89
CHMP4BP1-201ENST00000556017 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
CHMP4BP1-201ENST00000556017 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
CHMP4BP1-201ENST00000556017 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
CHMP4BP1-201ENST00000556017 LTN1O94822 1766 aa20.61■□□□□ 0.89
CHMP4BP1-201ENST00000556017 USP31Q70CQ4 1352 aa20.6■□□□□ 0.89
CHMP4BP1-201ENST00000556017 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
CHMP4BP1-201ENST00000556017 KCNH5Q8NCM2 988 aa20.6■□□□□ 0.89
CHMP4BP1-201ENST00000556017 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
CHMP4BP1-201ENST00000556017 SOX12O15370 315 aa20.59■□□□□ 0.89
CHMP4BP1-201ENST00000556017 PDGFDQ9GZP0 370 aaPredicted RBP20.59■□□□□ 0.89
CHMP4BP1-201ENST00000556017 KCNQ2O43526 872 aa20.56■□□□□ 0.88
CHMP4BP1-201ENST00000556017 CDCA7Q9BWT1 371 aaPredicted RBP20.56■□□□□ 0.88
CHMP4BP1-201ENST00000556017 NHSQ6T4R5 1651 aa20.56■□□□□ 0.88
CHMP4BP1-201ENST00000556017 TNS2Q63HR2 1409 aa20.55■□□□□ 0.88
CHMP4BP1-201ENST00000556017 NME9Q86XW9 330 aa20.54■□□□□ 0.88
CHMP4BP1-201ENST00000556017 SPON1Q9HCB6 807 aa20.54■□□□□ 0.88
CHMP4BP1-201ENST00000556017 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
CHMP4BP1-201ENST00000556017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHMP4BP1-201ENST00000556017 ERBB3P21860 1342 aa20.53■□□□□ 0.88
CHMP4BP1-201ENST00000556017 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
CHMP4BP1-201ENST00000556017 MYOM1P52179 1685 aa20.51■□□□□ 0.87
CHMP4BP1-201ENST00000556017 CSB-PGBD3P0DP91 1061 aa20.51■□□□□ 0.87
CHMP4BP1-201ENST00000556017 PAPPAQ13219 1627 aa20.51■□□□□ 0.87
CHMP4BP1-201ENST00000556017 NINLQ9Y2I6 1382 aa20.5■□□□□ 0.87
CHMP4BP1-201ENST00000556017 UTRNP46939 3433 aa20.5■□□□□ 0.87
CHMP4BP1-201ENST00000556017 BTAF1O14981 1849 aa20.5■□□□□ 0.87
CHMP4BP1-201ENST00000556017 A0A1W2PP64 1363 aa20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 EXOC5O00471 708 aa20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 PTGER2P43116 358 aa20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
CHMP4BP1-201ENST00000556017 TESK2Q96S53 571 aa20.46■□□□□ 0.87
CHMP4BP1-201ENST00000556017 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 ZBTB7AO95365 584 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 SLC15A2Q16348 729 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 ANKRD24Q8TF21 1146 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 SGIP1Q9BQI5 828 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
CHMP4BP1-201ENST00000556017 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
CHMP4BP1-201ENST00000556017 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
CHMP4BP1-201ENST00000556017 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
CHMP4BP1-201ENST00000556017 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
CHMP4BP1-201ENST00000556017 IL2RBP14784 551 aa20.42■□□□□ 0.86
CHMP4BP1-201ENST00000556017 HDGFL2Q7Z4V5 671 aaPredicted RBP20.41■□□□□ 0.86
CHMP4BP1-201ENST00000556017 YY1P25490 414 aa20.4■□□□□ 0.86
CHMP4BP1-201ENST00000556017 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
CHMP4BP1-201ENST00000556017 FBLN1P23142 703 aa20.39■□□□□ 0.85
CHMP4BP1-201ENST00000556017 IP6K1Q92551 441 aa20.39■□□□□ 0.85
CHMP4BP1-201ENST00000556017 LRRC4BQ9NT99 713 aa20.39■□□□□ 0.85
CHMP4BP1-201ENST00000556017 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
CHMP4BP1-201ENST00000556017 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
CHMP4BP1-201ENST00000556017 TUBGCP6Q96RT7 1819 aa20.38■□□□□ 0.85
CHMP4BP1-201ENST00000556017 COL24A1Q17RW2 1714 aa20.38■□□□□ 0.85
CHMP4BP1-201ENST00000556017 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
CHMP4BP1-201ENST00000556017 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
CHMP4BP1-201ENST00000556017 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
CHMP4BP1-201ENST00000556017 ZNF827Q17R98 1081 aa20.37■□□□□ 0.85
CHMP4BP1-201ENST00000556017 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
CHMP4BP1-201ENST00000556017 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
CHMP4BP1-201ENST00000556017 MTFR1LQ9H019 292 aa20.35■□□□□ 0.85
CHMP4BP1-201ENST00000556017 LY75O60449 1722 aa20.35■□□□□ 0.85
CHMP4BP1-201ENST00000556017 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
CHMP4BP1-201ENST00000556017 FHDC1Q9C0D6 1143 aaPredicted RBP20.33■□□□□ 0.85
CHMP4BP1-201ENST00000556017 NSD2O96028 1365 aa20.33■□□□□ 0.84
CHMP4BP1-201ENST00000556017 MEGF6O75095 1541 aa20.32■□□□□ 0.84
CHMP4BP1-201ENST00000556017 HOXC9P31274 260 aa20.32■□□□□ 0.84
CHMP4BP1-201ENST00000556017 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
CHMP4BP1-201ENST00000556017 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
CHMP4BP1-201ENST00000556017 CHD4Q14839 1912 aa20.3■□□□□ 0.84
CHMP4BP1-201ENST00000556017 ANKRD36BQ8N2N9 1353 aa20.3■□□□□ 0.84
CHMP4BP1-201ENST00000556017 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
CHMP4BP1-201ENST00000556017 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
CHMP4BP1-201ENST00000556017 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
CHMP4BP1-201ENST00000556017 FYB1O15117 783 aa20.27■□□□□ 0.84
CHMP4BP1-201ENST00000556017 KCNQ4P56696 695 aa20.27■□□□□ 0.84
CHMP4BP1-201ENST00000556017 COG3Q96JB2 828 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms