RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 GSK3AP49840 483 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 RTL5Q5HYW3 569 aaPredicted RBP3.98□□□□□ -1.77
NEK9-208ENST00000555961 C6orf118Q5T5N4 469 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 DDRGK1Q96HY6 314 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 CARD14Q9BXL6 1004 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 PGPEP1Q9NXJ5 209 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 MAP4K5Q9Y4K4 846 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 EMILIN1Q9Y6C2 1016 aa3.98□□□□□ -1.77
NEK9-208ENST00000555961 H3BM21 787 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 ADAM23O75077 832 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 ZBTB33Q86T24 672 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 CCDC116Q8IYX3 515 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 ITPKCQ96DU7 683 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 SLC10A4Q96EP9 437 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 ARHGAP9Q9BRR9 750 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 C1QTNF2Q9BXJ5 285 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 ZFAND3Q9H8U3 227 aa3.97□□□□□ -1.77
NEK9-208ENST00000555961 CDV3Q9UKY7 258 aaKnown RBP3.97□□□□□ -1.77
NEK9-208ENST00000555961 NR3C2P08235 984 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 GMPRP36959 345 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 VEGFBP49765 207 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 RASSF7Q02833 373 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 SKIV2LQ15477 1246 aaKnown RBP3.96□□□□□ -1.78
NEK9-208ENST00000555961 C4orf48Q5BLP8 95 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 SH3D19Q5HYK7 790 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 TRMT44Q8IYL2 757 aaKnown RBP3.96□□□□□ -1.78
NEK9-208ENST00000555961 LINC00528Q8N1L1 170 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 TRIM52Q96A61 297 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 TSEN34Q9BSV6 310 aaKnown RBP3.96□□□□□ -1.78
NEK9-208ENST00000555961 GOLGA2P5Q9HBQ8 144 aa3.96□□□□□ -1.78
NEK9-208ENST00000555961 ZC3H4Q9UPT8 1303 aaKnown RBP3.95□□□□□ -1.78
NEK9-208ENST00000555961 GRM5P41594 1212 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 PTK2Q05397 1052 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 CTDSPL2Q05D32 466 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 DHX9Q08211 1270 aaKnown RBP3.95□□□□□ -1.78
NEK9-208ENST00000555961 TPRNQ4KMQ1 711 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 PDXDC2PQ6P474 469 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 SH3BP5LQ7L8J4 393 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 SH3RF1Q7Z6J0 888 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 MEIOBQ8N635 442 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 KLF16Q9BXK1 252 aaPredicted RBP3.95□□□□□ -1.78
NEK9-208ENST00000555961 KDM4CQ9H3R0 1056 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 FKBPLQ9UIM3 349 aa3.95□□□□□ -1.78
NEK9-208ENST00000555961 SOBPA7XYQ1 873 aa3.94□□□□□ -1.78
NEK9-208ENST00000555961 COBLO75128 1261 aa3.94□□□□□ -1.78
NEK9-208ENST00000555961 AP1G2O75843 785 aa3.94□□□□□ -1.78
NEK9-208ENST00000555961 LAMC2Q13753 1193 aa3.94□□□□□ -1.78
NEK9-208ENST00000555961 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.94□□□□□ -1.78
NEK9-208ENST00000555961 ERFEQ4G0M1 354 aa3.94□□□□□ -1.78
NEK9-208ENST00000555961 NBPF20Q3BBV1 942 aa3.93□□□□□ -1.78
NEK9-208ENST00000555961 PPP1R26Q5T8A7 1209 aaPredicted RBP3.93□□□□□ -1.78
NEK9-208ENST00000555961 LRRN4Q8WUT4 740 aa3.93□□□□□ -1.78
NEK9-208ENST00000555961 KCTD15Q96SI1 283 aaPredicted RBP3.93□□□□□ -1.78
NEK9-208ENST00000555961 GPSM3Q9Y4H4 160 aa3.93□□□□□ -1.78
NEK9-208ENST00000555961 TTLL8A6PVC2 850 aa3.92□□□□□ -1.78
NEK9-208ENST00000555961 NR6A1Q15406 480 aa3.92□□□□□ -1.78
NEK9-208ENST00000555961 PPP2R2DQ66LE6 453 aa3.92□□□□□ -1.78
NEK9-208ENST00000555961 DZIP3Q86Y13 1208 aaKnown RBP3.92□□□□□ -1.78
NEK9-208ENST00000555961 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
NEK9-208ENST00000555961 GPBP1L1Q9HC44 474 aaPredicted RBP3.92□□□□□ -1.78
NEK9-208ENST00000555961 ERBB4Q15303 1308 aa3.92□□□□□ -1.78
NEK9-208ENST00000555961 PPFIA3O75145 1194 aa3.91□□□□□ -1.78
NEK9-208ENST00000555961 VSIG8P0DPA2 414 aa3.91□□□□□ -1.78
NEK9-208ENST00000555961 RAB15P59190 212 aa3.91□□□□□ -1.78
NEK9-208ENST00000555961 PROCA1Q8NCQ7 364 aaPredicted RBP3.91□□□□□ -1.78
NEK9-208ENST00000555961 PCMTD1Q96MG8 357 aaPredicted RBP3.91□□□□□ -1.78
NEK9-208ENST00000555961 FAM117AQ9C073 453 aa3.91□□□□□ -1.78
NEK9-208ENST00000555961 SOS2Q07890 1332 aaPredicted RBP3.91□□□□□ -1.78
NEK9-208ENST00000555961 FIGNL2A6NMB9 653 aa3.9□□□□□ -1.79
NEK9-208ENST00000555961 USP17L8P0C7I0 530 aa3.9□□□□□ -1.79
NEK9-208ENST00000555961 ADAM32Q8TC27 787 aa3.9□□□□□ -1.79
NEK9-208ENST00000555961 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.9□□□□□ -1.79
NEK9-208ENST00000555961 POLMQ9NP87 494 aaPredicted RBP3.9□□□□□ -1.79
NEK9-208ENST00000555961 DNMT3LQ9UJW3 386 aa3.9□□□□□ -1.79
NEK9-208ENST00000555961 SPINT1O43278 529 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 RELBQ01201 579 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 CBLBQ13191 982 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 TMEM259Q4ZIN3 620 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 INTS6LQ5JSJ4 861 aaKnown RBP3.89□□□□□ -1.79
NEK9-208ENST00000555961 Q6ZVU0 165 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 ZNF592Q92610 1267 aa3.89□□□□□ -1.79
NEK9-208ENST00000555961 RNF225M0QZC1 329 aaPredicted RBP3.88□□□□□ -1.79
NEK9-208ENST00000555961 RFC5P40937 340 aa3.88□□□□□ -1.79
NEK9-208ENST00000555961 PTSQ03393 145 aa3.88□□□□□ -1.79
NEK9-208ENST00000555961 NEUROD2Q15784 382 aa3.88□□□□□ -1.79
NEK9-208ENST00000555961 ERICH6Q7L0X2 663 aa3.88□□□□□ -1.79
NEK9-208ENST00000555961 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
NEK9-208ENST00000555961 ESF1Q9H501 851 aaKnown RBP3.88□□□□□ -1.79
NEK9-208ENST00000555961 CDC14CA4D256 554 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 APBB1O00213 710 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 ADH1AP07327 375 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 FOXK2Q01167 660 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 CCDC125Q86Z20 511 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 SEPT12Q8IYM1 358 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 CCDC155Q8N6L0 562 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 AGBL1Q96MI9 1066 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 INSM2Q96T92 566 aaPredicted RBP3.87□□□□□ -1.79
NEK9-208ENST00000555961 GOPCQ9HD26 462 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 ZNF330Q9Y3S2 320 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms