RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 AMPHP49418 695 aa23.52■■□□□ 1.36
XRCC3-214ENST00000555832 THRAP3Q9Y2W1 955 aaKnown RBP23.52■■□□□ 1.36
XRCC3-214ENST00000555832 NFAT5O94916 1531 aa23.51■■□□□ 1.35
XRCC3-214ENST00000555832 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
XRCC3-214ENST00000555832 CAMTA1Q9Y6Y1 1673 aa23.49■■□□□ 1.35
XRCC3-214ENST00000555832 SPATA31A1Q5TZJ5 1347 aa23.49■■□□□ 1.35
XRCC3-214ENST00000555832 ONECUT3O60422 494 aaPredicted RBP23.48■■□□□ 1.35
XRCC3-214ENST00000555832 TCP11L2Q8N4U5 519 aa23.48■■□□□ 1.35
XRCC3-214ENST00000555832 IP6K1Q92551 441 aa23.48■■□□□ 1.35
XRCC3-214ENST00000555832 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
XRCC3-214ENST00000555832 COL5A2P05997 1499 aaPredicted RBP23.48■■□□□ 1.35
XRCC3-214ENST00000555832 FAM98CQ17RN3 349 aaKnown RBP23.47■■□□□ 1.35
XRCC3-214ENST00000555832 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
XRCC3-214ENST00000555832 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 RGS12O14924 1447 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
XRCC3-214ENST00000555832 CRB1P82279 1406 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 LMO7Q8WWI1 1683 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
XRCC3-214ENST00000555832 RTL1A6NKG5 1358 aa23.46■■□□□ 1.35
XRCC3-214ENST00000555832 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
XRCC3-214ENST00000555832 BARGINQ6ZT62 677 aa23.46■■□□□ 1.35
XRCC3-214ENST00000555832 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
XRCC3-214ENST00000555832 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
XRCC3-214ENST00000555832 CDCA7Q9BWT1 371 aaPredicted RBP23.45■■□□□ 1.34
XRCC3-214ENST00000555832 KIF20BQ96Q89 1820 aa23.45■■□□□ 1.34
XRCC3-214ENST00000555832 MORC1Q86VD1 984 aa23.44■■□□□ 1.34
XRCC3-214ENST00000555832 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
XRCC3-214ENST00000555832 CARD10Q9BWT7 1032 aa23.43■■□□□ 1.34
XRCC3-214ENST00000555832 GLI3P10071 1580 aa23.43■■□□□ 1.34
XRCC3-214ENST00000555832 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
XRCC3-214ENST00000555832 ANKRD24Q8TF21 1146 aa23.42■■□□□ 1.34
XRCC3-214ENST00000555832 ERBB3P21860 1342 aa23.41■■□□□ 1.34
XRCC3-214ENST00000555832 HOXC9P31274 260 aa23.41■■□□□ 1.34
XRCC3-214ENST00000555832 NLRP2Q9NX02 1062 aa23.41■■□□□ 1.34
XRCC3-214ENST00000555832 RRS1Q15050 365 aaKnown RBP23.4■■□□□ 1.34
XRCC3-214ENST00000555832 KRT27Q7Z3Y8 459 aa23.4■■□□□ 1.34
XRCC3-214ENST00000555832 FLT4P35916 1363 aa23.4■■□□□ 1.34
XRCC3-214ENST00000555832 PDE3BQ13370 1112 aa23.39■■□□□ 1.33
XRCC3-214ENST00000555832 PPM1GO15355 546 aaPredicted RBP23.38■■□□□ 1.33
XRCC3-214ENST00000555832 COL18A1P39060 1754 aa23.37■■□□□ 1.33
XRCC3-214ENST00000555832 LTN1O94822 1766 aa23.37■■□□□ 1.33
XRCC3-214ENST00000555832 TNNT2P45379 298 aaPredicted RBP23.36■■□□□ 1.33
XRCC3-214ENST00000555832 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
XRCC3-214ENST00000555832 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
XRCC3-214ENST00000555832 INSRP06213 1382 aa23.35■■□□□ 1.33
XRCC3-214ENST00000555832 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
XRCC3-214ENST00000555832 PER1O15534 1290 aaPredicted RBP23.34■■□□□ 1.33
XRCC3-214ENST00000555832 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
XRCC3-214ENST00000555832 FBLN1P23142 703 aa23.33■■□□□ 1.33
XRCC3-214ENST00000555832 SF3B2Q13435 895 aaKnown RBP23.32■■□□□ 1.32
XRCC3-214ENST00000555832 DDB1Q16531 1140 aa23.32■■□□□ 1.32
XRCC3-214ENST00000555832 EMILIN1Q9Y6C2 1016 aa23.32■■□□□ 1.32
XRCC3-214ENST00000555832 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
XRCC3-214ENST00000555832 ANKRD26Q9UPS8 1709 aa23.3■■□□□ 1.32
XRCC3-214ENST00000555832 EXOC5O00471 708 aa23.3■■□□□ 1.32
XRCC3-214ENST00000555832 IL2RBP14784 551 aa23.3■■□□□ 1.32
XRCC3-214ENST00000555832 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
XRCC3-214ENST00000555832 HSP90AB2PQ58FF8 381 aa23.29■■□□□ 1.32
XRCC3-214ENST00000555832 FAM196AQ6ZSG2 479 aa23.29■■□□□ 1.32
XRCC3-214ENST00000555832 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.32
XRCC3-214ENST00000555832 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
XRCC3-214ENST00000555832 THSD7AQ9UPZ6 1657 aa23.27■■□□□ 1.32
XRCC3-214ENST00000555832 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
XRCC3-214ENST00000555832 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
XRCC3-214ENST00000555832 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
XRCC3-214ENST00000555832 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
XRCC3-214ENST00000555832 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
XRCC3-214ENST00000555832 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
XRCC3-214ENST00000555832 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
XRCC3-214ENST00000555832 CFAP53Q96M91 514 aa23.2■■□□□ 1.3
XRCC3-214ENST00000555832 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
XRCC3-214ENST00000555832 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
XRCC3-214ENST00000555832 OVOS2A0A0G2JMS6 1433 aa23.19■■□□□ 1.3
XRCC3-214ENST00000555832 BRWD3Q6RI45 1802 aa23.18■■□□□ 1.3
XRCC3-214ENST00000555832 MTHFSP49914 203 aa23.18■■□□□ 1.3
XRCC3-214ENST00000555832 DDX10Q13206 875 aaKnown RBP23.18■■□□□ 1.3
XRCC3-214ENST00000555832 TNS2Q63HR2 1409 aa23.17■■□□□ 1.3
XRCC3-214ENST00000555832 EIF4A2Q14240 407 aaKnown RBP23.17■■□□□ 1.3
XRCC3-214ENST00000555832 BAG6P46379 1132 aa23.16■■□□□ 1.3
XRCC3-214ENST00000555832 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
XRCC3-214ENST00000555832 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
XRCC3-214ENST00000555832 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
XRCC3-214ENST00000555832 USHBP1Q8N6Y0 703 aa23.14■■□□□ 1.29
XRCC3-214ENST00000555832 EYA1Q99502 592 aa23.14■■□□□ 1.29
XRCC3-214ENST00000555832 ZNF316A6NFI3 1004 aaPredicted RBP23.13■■□□□ 1.29
XRCC3-214ENST00000555832 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
XRCC3-214ENST00000555832 PLEKHG2Q9H7P9 1386 aa23.13■■□□□ 1.29
XRCC3-214ENST00000555832 DIAPH1O60610 1272 aaKnown RBP23.12■■□□□ 1.29
XRCC3-214ENST00000555832 MARCH10Q8NA82 808 aaPredicted RBP23.12■■□□□ 1.29
XRCC3-214ENST00000555832 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
XRCC3-214ENST00000555832 BCL9O00512 1426 aa23.11■■□□□ 1.29
XRCC3-214ENST00000555832 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
XRCC3-214ENST00000555832 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
XRCC3-214ENST00000555832 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
XRCC3-214ENST00000555832 TRIM37O94972 964 aa23.1■■□□□ 1.29
XRCC3-214ENST00000555832 RALBP1Q15311 655 aa23.1■■□□□ 1.29
XRCC3-214ENST00000555832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.29
XRCC3-214ENST00000555832 IGSF1Q8N6C5 1336 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms