RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 MYT1Q01538 1121 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-218ENST00000555628 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
PRKCH-218ENST00000555628 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
PRKCH-218ENST00000555628 CASZ1Q86V15 1759 aa13.69□□□□□ -0.22
PRKCH-218ENST00000555628 YY1P25490 414 aa13.69□□□□□ -0.22
PRKCH-218ENST00000555628 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
PRKCH-218ENST00000555628 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
PRKCH-218ENST00000555628 ATP7BP35670 1465 aa13.68□□□□□ -0.22
PRKCH-218ENST00000555628 TRIM37O94972 964 aa13.68□□□□□ -0.22
PRKCH-218ENST00000555628 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
PRKCH-218ENST00000555628 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
PRKCH-218ENST00000555628 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
PRKCH-218ENST00000555628 TOPAZ1Q8N9V7 1692 aa13.67□□□□□ -0.22
PRKCH-218ENST00000555628 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRKCH-218ENST00000555628 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
PRKCH-218ENST00000555628 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
PRKCH-218ENST00000555628 ITSN1Q15811 1721 aa13.67□□□□□ -0.22
PRKCH-218ENST00000555628 SSH2Q76I76 1423 aa13.66□□□□□ -0.22
PRKCH-218ENST00000555628 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
PRKCH-218ENST00000555628 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
PRKCH-218ENST00000555628 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
PRKCH-218ENST00000555628 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
PRKCH-218ENST00000555628 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
PRKCH-218ENST00000555628 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
PRKCH-218ENST00000555628 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
PRKCH-218ENST00000555628 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
PRKCH-218ENST00000555628 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
PRKCH-218ENST00000555628 SBF2Q86WG5 1849 aa13.64□□□□□ -0.23
PRKCH-218ENST00000555628 APBA3O96018 575 aa13.63□□□□□ -0.23
PRKCH-218ENST00000555628 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
PRKCH-218ENST00000555628 CHRNA2Q15822 529 aa13.62□□□□□ -0.23
PRKCH-218ENST00000555628 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
PRKCH-218ENST00000555628 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
PRKCH-218ENST00000555628 POLR3AO14802 1390 aaPredicted RBP13.61□□□□□ -0.23
PRKCH-218ENST00000555628 CPDO75976 1380 aa13.61□□□□□ -0.23
PRKCH-218ENST00000555628 MYOM1P52179 1685 aa13.61□□□□□ -0.23
PRKCH-218ENST00000555628 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
PRKCH-218ENST00000555628 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
PRKCH-218ENST00000555628 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
PRKCH-218ENST00000555628 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
PRKCH-218ENST00000555628 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
PRKCH-218ENST00000555628 USP19O94966 1318 aa13.6□□□□□ -0.23
PRKCH-218ENST00000555628 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
PRKCH-218ENST00000555628 KCNQ2O43526 872 aa13.59□□□□□ -0.23
PRKCH-218ENST00000555628 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
PRKCH-218ENST00000555628 SPON1Q9HCB6 807 aa13.59□□□□□ -0.23
PRKCH-218ENST00000555628 POGKQ9P215 609 aa13.59□□□□□ -0.23
PRKCH-218ENST00000555628 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
PRKCH-218ENST00000555628 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
PRKCH-218ENST00000555628 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
PRKCH-218ENST00000555628 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
PRKCH-218ENST00000555628 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
PRKCH-218ENST00000555628 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
PRKCH-218ENST00000555628 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
PRKCH-218ENST00000555628 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
PRKCH-218ENST00000555628 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
PRKCH-218ENST00000555628 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
PRKCH-218ENST00000555628 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
PRKCH-218ENST00000555628 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
PRKCH-218ENST00000555628 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 TIE1P35590 1138 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 PTGER2P43116 358 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-218ENST00000555628 COL18A1P39060 1754 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 BCL9O00512 1426 aa13.55□□□□□ -0.24
PRKCH-218ENST00000555628 PLSCR1O15162 318 aa13.54□□□□□ -0.24
PRKCH-218ENST00000555628 PDE3BQ13370 1112 aa13.54□□□□□ -0.24
PRKCH-218ENST00000555628 ZNF784Q8NCA9 323 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-218ENST00000555628 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
PRKCH-218ENST00000555628 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
PRKCH-218ENST00000555628 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
PRKCH-218ENST00000555628 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
PRKCH-218ENST00000555628 SLIT3O75094 1523 aa13.53□□□□□ -0.24
PRKCH-218ENST00000555628 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-218ENST00000555628 CRB1P82279 1406 aa13.52□□□□□ -0.25
PRKCH-218ENST00000555628 CHD4Q14839 1912 aa13.52□□□□□ -0.25
PRKCH-218ENST00000555628 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
PRKCH-218ENST00000555628 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
PRKCH-218ENST00000555628 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
PRKCH-218ENST00000555628 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
PRKCH-218ENST00000555628 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
PRKCH-218ENST00000555628 ACEP12821 1306 aa13.5□□□□□ -0.25
PRKCH-218ENST00000555628 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-218ENST00000555628 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
PRKCH-218ENST00000555628 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
PRKCH-218ENST00000555628 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
PRKCH-218ENST00000555628 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
PRKCH-218ENST00000555628 GCP02774 474 aa13.47□□□□□ -0.25
PRKCH-218ENST00000555628 EVA1CP58658 441 aa13.47□□□□□ -0.25
PRKCH-218ENST00000555628 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-218ENST00000555628 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
PRKCH-218ENST00000555628 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-218ENST00000555628 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms