RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CBLBQ13191 982 aa10.16□□□□□ -0.78
SNX6-204ENST00000555541 QPCTQ16769 361 aa10.15□□□□□ -0.78
SNX6-204ENST00000555541 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.78
SNX6-204ENST00000555541 ARMC2Q8NEN0 867 aa10.15□□□□□ -0.78
SNX6-204ENST00000555541 TRIM66O15016 1216 aa10.14□□□□□ -0.79
SNX6-204ENST00000555541 PPP1R26Q5T8A7 1209 aaPredicted RBP10.14□□□□□ -0.79
SNX6-204ENST00000555541 SVOPQ8N4V2 548 aa10.14□□□□□ -0.79
SNX6-204ENST00000555541 LIMD1Q9UGP4 676 aa10.14□□□□□ -0.79
SNX6-204ENST00000555541 LILRB3O75022 631 aa10.13□□□□□ -0.79
SNX6-204ENST00000555541 IGHA1P01876 353 aa10.13□□□□□ -0.79
SNX6-204ENST00000555541 ITGA6P23229 1130 aa10.13□□□□□ -0.79
SNX6-204ENST00000555541 IRS1P35568 1242 aa10.13□□□□□ -0.79
SNX6-204ENST00000555541 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
SNX6-204ENST00000555541 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
SNX6-204ENST00000555541 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
SNX6-204ENST00000555541 SENP3-EIF4A1A0A087X0R7 540 aa10.11□□□□□ -0.79
SNX6-204ENST00000555541 VWA5B2Q8N398 1253 aa10.11□□□□□ -0.79
SNX6-204ENST00000555541 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
SNX6-204ENST00000555541 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
SNX6-204ENST00000555541 MAGEB6P1A0A0J9YX57 407 aa10.09□□□□□ -0.79
SNX6-204ENST00000555541 CTSOP43234 321 aaPredicted RBP10.09□□□□□ -0.79
SNX6-204ENST00000555541 KANK3Q6NY19 840 aa10.09□□□□□ -0.79
SNX6-204ENST00000555541 GPKOWQ92917 476 aaPredicted RBP eCLIP10.08□□□□□ -0.8
SNX6-204ENST00000555541 FOXK2Q01167 660 aa10.07□□□□□ -0.8
SNX6-204ENST00000555541 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
SNX6-204ENST00000555541 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
SNX6-204ENST00000555541 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
SNX6-204ENST00000555541 AK7Q96M32 723 aa10.07□□□□□ -0.8
SNX6-204ENST00000555541 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
SNX6-204ENST00000555541 ITGB2P05107 769 aa10.06□□□□□ -0.8
SNX6-204ENST00000555541 GAS6Q14393 721 aa10.05□□□□□ -0.8
SNX6-204ENST00000555541 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
SNX6-204ENST00000555541 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
SNX6-204ENST00000555541 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
SNX6-204ENST00000555541 ADAMTS2O95450 1211 aa10.04□□□□□ -0.8
SNX6-204ENST00000555541 TSC1Q92574 1164 aa10.04□□□□□ -0.8
SNX6-204ENST00000555541 KCTD15Q96SI1 283 aaPredicted RBP10.04□□□□□ -0.8
SNX6-204ENST00000555541 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
SNX6-204ENST00000555541 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
SNX6-204ENST00000555541 XP32Q5T750 250 aa10.03□□□□□ -0.8
SNX6-204ENST00000555541 SCARF2Q96GP6 870 aaPredicted RBP10.03□□□□□ -0.8
SNX6-204ENST00000555541 CDC14CA4D256 554 aa10.02□□□□□ -0.81
SNX6-204ENST00000555541 SRSF11Q05519 484 aaKnown RBP10.02□□□□□ -0.81
SNX6-204ENST00000555541 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
SNX6-204ENST00000555541 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.81
SNX6-204ENST00000555541 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
SNX6-204ENST00000555541 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 MARSP56192 900 aaKnown RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
SNX6-204ENST00000555541 PDE4DQ08499 809 aa10□□□□□ -0.81
SNX6-204ENST00000555541 HELBQ8NG08 1087 aaPredicted RBP10□□□□□ -0.81
SNX6-204ENST00000555541 RELBQ01201 579 aa9.99□□□□□ -0.81
SNX6-204ENST00000555541 DHX9Q08211 1270 aaKnown RBP9.99□□□□□ -0.81
SNX6-204ENST00000555541 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
SNX6-204ENST00000555541 CDV3Q9UKY7 258 aaKnown RBP9.99□□□□□ -0.81
SNX6-204ENST00000555541 ADAM23O75077 832 aa9.97□□□□□ -0.81
SNX6-204ENST00000555541 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
SNX6-204ENST00000555541 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
SNX6-204ENST00000555541 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
SNX6-204ENST00000555541 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
SNX6-204ENST00000555541 LILRA1O75019 489 aa9.96□□□□□ -0.82
SNX6-204ENST00000555541 ZNF395Q9H8N7 513 aaPredicted RBP9.96□□□□□ -0.82
SNX6-204ENST00000555541 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.82
SNX6-204ENST00000555541 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
SNX6-204ENST00000555541 SLC10A4Q96EP9 437 aa9.95□□□□□ -0.82
SNX6-204ENST00000555541 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
SNX6-204ENST00000555541 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
SNX6-204ENST00000555541 PROCP04070 461 aa9.94□□□□□ -0.82
SNX6-204ENST00000555541 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
SNX6-204ENST00000555541 SPOCK3Q9BQ16 436 aa9.94□□□□□ -0.82
SNX6-204ENST00000555541 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
SNX6-204ENST00000555541 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
SNX6-204ENST00000555541 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
SNX6-204ENST00000555541 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
SNX6-204ENST00000555541 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
SNX6-204ENST00000555541 ADH1AP07327 375 aa9.92□□□□□ -0.82
SNX6-204ENST00000555541 ZC3H4Q9UPT8 1303 aaKnown RBP9.91□□□□□ -0.82
SNX6-204ENST00000555541 MSTNO14793 375 aa9.91□□□□□ -0.82
SNX6-204ENST00000555541 PTGIRP43119 386 aa9.9□□□□□ -0.82
SNX6-204ENST00000555541 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
SNX6-204ENST00000555541 ZNF837Q96EG3 531 aaPredicted RBP9.9□□□□□ -0.82
SNX6-204ENST00000555541 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
SNX6-204ENST00000555541 ADAM32Q8TC27 787 aa9.89□□□□□ -0.83
SNX6-204ENST00000555541 KRTAP4-8Q9BYQ9 185 aa9.89□□□□□ -0.83
SNX6-204ENST00000555541 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
SNX6-204ENST00000555541 ESPNB1AK53 854 aa9.88□□□□□ -0.83
SNX6-204ENST00000555541 NR6A1Q15406 480 aa9.88□□□□□ -0.83
SNX6-204ENST00000555541 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
SNX6-204ENST00000555541 ERVH48-1M5A8F1 160 aa9.87□□□□□ -0.83
SNX6-204ENST00000555541 LYSMD3Q7Z3D4 306 aa9.87□□□□□ -0.83
SNX6-204ENST00000555541 IGF1RP08069 1367 aa9.87□□□□□ -0.83
SNX6-204ENST00000555541 RNF144AP50876 292 aaPredicted RBP9.86□□□□□ -0.83
SNX6-204ENST00000555541 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
SNX6-204ENST00000555541 ACDQ96AP0 544 aa9.86□□□□□ -0.83
SNX6-204ENST00000555541 GMCL1Q96IK5 515 aa9.86□□□□□ -0.83
SNX6-204ENST00000555541 ENAMQ9NRM1 1142 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms