RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 VPS72Q15906 364 aa23.64■■□□□ 1.37
PSEN1-212ENST00000555254 FAM9BQ8IZU0 186 aa23.64■■□□□ 1.37
PSEN1-212ENST00000555254 GGNBP2Q9H3C7 697 aa23.64■■□□□ 1.37
PSEN1-212ENST00000555254 MON2Q7Z3U7 1717 aa23.64■■□□□ 1.37
PSEN1-212ENST00000555254 EP400Q96L91 3159 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
PSEN1-212ENST00000555254 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 COG3Q96JB2 828 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 CRYBG1Q9Y4K1 1723 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 CPDO75976 1380 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 USP31Q70CQ4 1352 aa23.63■■□□□ 1.37
PSEN1-212ENST00000555254 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
PSEN1-212ENST00000555254 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
PSEN1-212ENST00000555254 SLIT3O75094 1523 aa23.6■■□□□ 1.37
PSEN1-212ENST00000555254 ARHGEF25Q86VW2 580 aa23.59■■□□□ 1.37
PSEN1-212ENST00000555254 PLCH1Q4KWH8 1693 aa23.59■■□□□ 1.37
PSEN1-212ENST00000555254 PNISRQ8TF01 805 aaKnown RBP23.58■■□□□ 1.37
PSEN1-212ENST00000555254 CFAP53Q96M91 514 aa23.58■■□□□ 1.37
PSEN1-212ENST00000555254 A0A0G2JS52 829 aa23.56■■□□□ 1.36
PSEN1-212ENST00000555254 MYT1Q01538 1121 aa23.56■■□□□ 1.36
PSEN1-212ENST00000555254 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
PSEN1-212ENST00000555254 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
PSEN1-212ENST00000555254 LARP1Q6PKG0 1096 aaKnown RBP23.55■■□□□ 1.36
PSEN1-212ENST00000555254 AXIN2Q9Y2T1 843 aa23.55■■□□□ 1.36
PSEN1-212ENST00000555254 FBLN1P23142 703 aa23.54■■□□□ 1.36
PSEN1-212ENST00000555254 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
PSEN1-212ENST00000555254 FAM98CQ17RN3 349 aaKnown RBP23.54■■□□□ 1.36
PSEN1-212ENST00000555254 SPATA31A5Q5VU36 1347 aa23.54■■□□□ 1.36
PSEN1-212ENST00000555254 SPATA31A7Q8IWB4 1347 aa23.54■■□□□ 1.36
PSEN1-212ENST00000555254 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
PSEN1-212ENST00000555254 NWD2Q9ULI1 1742 aa23.53■■□□□ 1.36
PSEN1-212ENST00000555254 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
PSEN1-212ENST00000555254 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
PSEN1-212ENST00000555254 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.52■■□□□ 1.36
PSEN1-212ENST00000555254 NFAT5O94916 1531 aa23.51■■□□□ 1.35
PSEN1-212ENST00000555254 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
PSEN1-212ENST00000555254 MTHFSP49914 203 aa23.51■■□□□ 1.35
PSEN1-212ENST00000555254 SEPT12Q8IYM1 358 aa23.51■■□□□ 1.35
PSEN1-212ENST00000555254 LRP5O75197 1615 aa23.5■■□□□ 1.35
PSEN1-212ENST00000555254 SPATA31A1Q5TZJ5 1347 aa23.5■■□□□ 1.35
PSEN1-212ENST00000555254 GLI3P10071 1580 aa23.49■■□□□ 1.35
PSEN1-212ENST00000555254 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
PSEN1-212ENST00000555254 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
PSEN1-212ENST00000555254 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
PSEN1-212ENST00000555254 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
PSEN1-212ENST00000555254 AMPHP49418 695 aa23.47■■□□□ 1.35
PSEN1-212ENST00000555254 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
PSEN1-212ENST00000555254 COL5A2P05997 1499 aaPredicted RBP23.47■■□□□ 1.35
PSEN1-212ENST00000555254 ONECUT3O60422 494 aaPredicted RBP23.46■■□□□ 1.35
PSEN1-212ENST00000555254 LMO7Q8WWI1 1683 aa23.45■■□□□ 1.34
PSEN1-212ENST00000555254 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
PSEN1-212ENST00000555254 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
PSEN1-212ENST00000555254 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
PSEN1-212ENST00000555254 IP6K1Q92551 441 aa23.44■■□□□ 1.34
PSEN1-212ENST00000555254 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
PSEN1-212ENST00000555254 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
PSEN1-212ENST00000555254 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
PSEN1-212ENST00000555254 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
PSEN1-212ENST00000555254 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
PSEN1-212ENST00000555254 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
PSEN1-212ENST00000555254 CRB1P82279 1406 aa23.42■■□□□ 1.34
PSEN1-212ENST00000555254 INSRP06213 1382 aa23.41■■□□□ 1.34
PSEN1-212ENST00000555254 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
PSEN1-212ENST00000555254 KRT27Q7Z3Y8 459 aa23.41■■□□□ 1.34
PSEN1-212ENST00000555254 HOXC9P31274 260 aa23.4■■□□□ 1.34
PSEN1-212ENST00000555254 POLKQ9UBT6 870 aa23.4■■□□□ 1.34
PSEN1-212ENST00000555254 COL18A1P39060 1754 aa23.4■■□□□ 1.34
PSEN1-212ENST00000555254 BARGINQ6ZT62 677 aa23.39■■□□□ 1.33
PSEN1-212ENST00000555254 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.33
PSEN1-212ENST00000555254 THRAP3Q9Y2W1 955 aaKnown RBP23.39■■□□□ 1.33
PSEN1-212ENST00000555254 CARD10Q9BWT7 1032 aa23.38■■□□□ 1.33
PSEN1-212ENST00000555254 EMILIN1Q9Y6C2 1016 aa23.37■■□□□ 1.33
PSEN1-212ENST00000555254 ERBB3P21860 1342 aa23.36■■□□□ 1.33
PSEN1-212ENST00000555254 DIAPH1O60610 1272 aaKnown RBP23.36■■□□□ 1.33
PSEN1-212ENST00000555254 FAM182BQ5T319 152 aa23.36■■□□□ 1.33
PSEN1-212ENST00000555254 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
PSEN1-212ENST00000555254 BLMP54132 1417 aaPredicted RBP23.34■■□□□ 1.33
PSEN1-212ENST00000555254 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
PSEN1-212ENST00000555254 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
PSEN1-212ENST00000555254 ABCC6O95255 1503 aa23.33■■□□□ 1.33
PSEN1-212ENST00000555254 LTN1O94822 1766 aa23.33■■□□□ 1.33
PSEN1-212ENST00000555254 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-212ENST00000555254 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.33
PSEN1-212ENST00000555254 U2SURPO15042 1029 aaKnown RBP23.32■■□□□ 1.32
PSEN1-212ENST00000555254 PNNQ9H307 717 aaKnown RBP23.32■■□□□ 1.32
PSEN1-212ENST00000555254 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
PSEN1-212ENST00000555254 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
PSEN1-212ENST00000555254 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
PSEN1-212ENST00000555254 FLT4P35916 1363 aa23.29■■□□□ 1.32
PSEN1-212ENST00000555254 DDB1Q16531 1140 aa23.29■■□□□ 1.32
PSEN1-212ENST00000555254 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
PSEN1-212ENST00000555254 SMG6Q86US8 1419 aaKnown RBP23.28■■□□□ 1.32
PSEN1-212ENST00000555254 THSD7AQ9UPZ6 1657 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 NBPF6Q5VWK0 638 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 NBPF4Q96M43 638 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
PSEN1-212ENST00000555254 BRWD3Q6RI45 1802 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms