RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 LMO7Q8WWI1 1683 aa22.19■■□□□ 1.14
SPTLC2-203ENST00000554901 MTHFSP49914 203 aa22.19■■□□□ 1.14
SPTLC2-203ENST00000554901 CHRNA2Q15822 529 aa22.19■■□□□ 1.14
SPTLC2-203ENST00000554901 FNBP4Q8N3X1 1017 aaPredicted RBP22.19■■□□□ 1.14
SPTLC2-203ENST00000554901 COL18A1P39060 1754 aa22.18■■□□□ 1.14
SPTLC2-203ENST00000554901 ZBTB7CA1YPR0 619 aa22.18■■□□□ 1.14
SPTLC2-203ENST00000554901 NGLY1Q96IV0 654 aa22.18■■□□□ 1.14
SPTLC2-203ENST00000554901 INSRP06213 1382 aa22.18■■□□□ 1.14
SPTLC2-203ENST00000554901 SLIT2O94813 1529 aa22.18■■□□□ 1.14
SPTLC2-203ENST00000554901 C8orf37Q96NL8 207 aa22.17■■□□□ 1.14
SPTLC2-203ENST00000554901 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
SPTLC2-203ENST00000554901 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
SPTLC2-203ENST00000554901 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
SPTLC2-203ENST00000554901 AXIN2Q9Y2T1 843 aa22.16■■□□□ 1.14
SPTLC2-203ENST00000554901 CAMTA1Q9Y6Y1 1673 aa22.15■■□□□ 1.14
SPTLC2-203ENST00000554901 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
SPTLC2-203ENST00000554901 BTG4Q9NY30 223 aa22.15■■□□□ 1.14
SPTLC2-203ENST00000554901 PLCH1Q4KWH8 1693 aa22.14■■□□□ 1.13
SPTLC2-203ENST00000554901 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
SPTLC2-203ENST00000554901 COL5A2P05997 1499 aaPredicted RBP22.13■■□□□ 1.13
SPTLC2-203ENST00000554901 ERBB3P21860 1342 aa22.12■■□□□ 1.13
SPTLC2-203ENST00000554901 UNC5CLQ8IV45 518 aa22.11■■□□□ 1.13
SPTLC2-203ENST00000554901 AFF2P51816 1311 aa22.11■■□□□ 1.13
SPTLC2-203ENST00000554901 BCL9LQ86UU0 1499 aa22.11■■□□□ 1.13
SPTLC2-203ENST00000554901 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
SPTLC2-203ENST00000554901 EVA1CP58658 441 aa22.1■■□□□ 1.13
SPTLC2-203ENST00000554901 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
SPTLC2-203ENST00000554901 USP21Q9UK80 565 aa22.1■■□□□ 1.13
SPTLC2-203ENST00000554901 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.09■■□□□ 1.13
SPTLC2-203ENST00000554901 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
SPTLC2-203ENST00000554901 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
SPTLC2-203ENST00000554901 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
SPTLC2-203ENST00000554901 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
SPTLC2-203ENST00000554901 ZNF772Q68DY9 489 aaPredicted RBP22.07■■□□□ 1.12
SPTLC2-203ENST00000554901 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
SPTLC2-203ENST00000554901 RGPD5Q99666 1765 aa22.06■■□□□ 1.12
SPTLC2-203ENST00000554901 CSB-PGBD3P0DP91 1061 aa22.06■■□□□ 1.12
SPTLC2-203ENST00000554901 IL13P35225 146 aa22.06■■□□□ 1.12
SPTLC2-203ENST00000554901 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
SPTLC2-203ENST00000554901 CRB1P82279 1406 aa22.05■■□□□ 1.12
SPTLC2-203ENST00000554901 VPS72Q15906 364 aa22.05■■□□□ 1.12
SPTLC2-203ENST00000554901 NUDCQ9Y266 331 aa22.05■■□□□ 1.12
SPTLC2-203ENST00000554901 LTV1Q96GA3 475 aaPredicted RBP22.04■■□□□ 1.12
SPTLC2-203ENST00000554901 TRPC5Q9UL62 973 aaPredicted RBP22.04■■□□□ 1.12
SPTLC2-203ENST00000554901 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
SPTLC2-203ENST00000554901 LARP1Q6PKG0 1096 aaKnown RBP22.03■■□□□ 1.12
SPTLC2-203ENST00000554901 TOM1L2Q6ZVM7 507 aa22.03■■□□□ 1.12
SPTLC2-203ENST00000554901 CARD10Q9BWT7 1032 aa22.03■■□□□ 1.12
SPTLC2-203ENST00000554901 ATRNO75882 1429 aa22.02■■□□□ 1.12
SPTLC2-203ENST00000554901 NLRP2Q9NX02 1062 aa22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 THRAP3Q9Y2W1 955 aaKnown RBP22.01■■□□□ 1.11
SPTLC2-203ENST00000554901 IGSF1Q8N6C5 1336 aa22■■□□□ 1.11
SPTLC2-203ENST00000554901 NBPF6Q5VWK0 638 aa22■■□□□ 1.11
SPTLC2-203ENST00000554901 NBPF4Q96M43 638 aa22■■□□□ 1.11
SPTLC2-203ENST00000554901 EYA1Q99502 592 aa22■■□□□ 1.11
SPTLC2-203ENST00000554901 SPATA31A1Q5TZJ5 1347 aa22■■□□□ 1.11
SPTLC2-203ENST00000554901 MIER1Q8N108 512 aa21.99■■□□□ 1.11
SPTLC2-203ENST00000554901 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
SPTLC2-203ENST00000554901 QTRT2Q9H974 415 aaKnown RBP21.98■■□□□ 1.11
SPTLC2-203ENST00000554901 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
SPTLC2-203ENST00000554901 TCP11L2Q8N4U5 519 aa21.97■■□□□ 1.11
SPTLC2-203ENST00000554901 GJD4Q96KN9 370 aaPredicted RBP21.97■■□□□ 1.11
SPTLC2-203ENST00000554901 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
SPTLC2-203ENST00000554901 KDRP35968 1356 aa21.96■■□□□ 1.11
SPTLC2-203ENST00000554901 PLEKHG2Q9H7P9 1386 aa21.96■■□□□ 1.11
SPTLC2-203ENST00000554901 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
SPTLC2-203ENST00000554901 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
SPTLC2-203ENST00000554901 RGS17Q9UGC6 210 aaPredicted RBP21.96■■□□□ 1.11
SPTLC2-203ENST00000554901 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
SPTLC2-203ENST00000554901 CDCA7Q9BWT1 371 aaPredicted RBP21.95■■□□□ 1.1
SPTLC2-203ENST00000554901 WDR43Q15061 677 aaKnown RBP eCLIP21.94■■□□□ 1.1
SPTLC2-203ENST00000554901 U2AF1L5P0DN76 240 aaPredicted RBP21.93■■□□□ 1.1
SPTLC2-203ENST00000554901 U2AF1Q01081 240 aaKnown RBP eCLIP21.93■■□□□ 1.1
SPTLC2-203ENST00000554901 FCHSD2O94868 740 aa21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 SULT6B1Q6IMI4 303 aa21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
SPTLC2-203ENST00000554901 PNNQ9H307 717 aaKnown RBP21.91■■□□□ 1.1
SPTLC2-203ENST00000554901 GLI3P10071 1580 aa21.91■■□□□ 1.1
SPTLC2-203ENST00000554901 ONECUT3O60422 494 aaPredicted RBP21.9■■□□□ 1.1
SPTLC2-203ENST00000554901 IL2RBP14784 551 aa21.9■■□□□ 1.1
SPTLC2-203ENST00000554901 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
SPTLC2-203ENST00000554901 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
SPTLC2-203ENST00000554901 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
SPTLC2-203ENST00000554901 HMOX1P09601 288 aa21.88■■□□□ 1.09
SPTLC2-203ENST00000554901 RXRBP28702 533 aa21.88■■□□□ 1.09
SPTLC2-203ENST00000554901 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
SPTLC2-203ENST00000554901 RSPH6AQ9H0K4 717 aa21.88■■□□□ 1.09
SPTLC2-203ENST00000554901 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
SPTLC2-203ENST00000554901 POTEAQ6S8J7 498 aa21.87■■□□□ 1.09
SPTLC2-203ENST00000554901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.87■■□□□ 1.093e-6■■■□□ 14.9
SPTLC2-203ENST00000554901 FAM98CQ17RN3 349 aaKnown RBP21.86■■□□□ 1.09
SPTLC2-203ENST00000554901 ADAMTS8Q9UP79 889 aa21.86■■□□□ 1.09
SPTLC2-203ENST00000554901 OVOS2A0A0G2JMS6 1433 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms