RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 SH3BP5LQ7L8J4 393 aa8.04□□□□□ -1.12
CFAP54-207ENST00000554821 SH3RF1Q7Z6J0 888 aa8.04□□□□□ -1.12
CFAP54-207ENST00000554821 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
CFAP54-207ENST00000554821 C1QTNF2Q9BXJ5 285 aa8.04□□□□□ -1.12
CFAP54-207ENST00000554821 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
CFAP54-207ENST00000554821 CDV3Q9UKY7 258 aaKnown RBP8.04□□□□□ -1.12
CFAP54-207ENST00000554821 TLL2Q9Y6L7 1015 aa8.04□□□□□ -1.12
CFAP54-207ENST00000554821 APBB1O00213 710 aa8.02□□□□□ -1.13
CFAP54-207ENST00000554821 RFC5P40937 340 aa8.02□□□□□ -1.13
CFAP54-207ENST00000554821 NNTQ13423 1086 aa8.02□□□□□ -1.13
CFAP54-207ENST00000554821 FOXJ1Q92949 421 aa8.02□□□□□ -1.13
CFAP54-207ENST00000554821 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
CFAP54-207ENST00000554821 SOCS7O14512 581 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
CFAP54-207ENST00000554821 USP17L8P0C7I0 530 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 BMP1P13497 986 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 PTK2Q05397 1052 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
CFAP54-207ENST00000554821 LCE3BQ5TA77 95 aa8□□□□□ -1.13
CFAP54-207ENST00000554821 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
CFAP54-207ENST00000554821 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
CFAP54-207ENST00000554821 SLC10A4Q96EP9 437 aa7.99□□□□□ -1.13
CFAP54-207ENST00000554821 MAGEB6P1A0A0J9YX57 407 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 NR6A1Q15406 480 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 BANK1Q8NDB2 785 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
CFAP54-207ENST00000554821 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
CFAP54-207ENST00000554821 VASH1Q7L8A9 365 aaPredicted RBP7.97□□□□□ -1.13
CFAP54-207ENST00000554821 ZBTB33Q86T24 672 aa7.97□□□□□ -1.13
CFAP54-207ENST00000554821 NBPF20Q3BBV1 942 aa7.96□□□□□ -1.14
CFAP54-207ENST00000554821 ERFEQ4G0M1 354 aa7.96□□□□□ -1.14
CFAP54-207ENST00000554821 KANK3Q6NY19 840 aa7.96□□□□□ -1.14
CFAP54-207ENST00000554821 CARD14Q9BXL6 1004 aa7.96□□□□□ -1.14
CFAP54-207ENST00000554821 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
CFAP54-207ENST00000554821 TIMP2P16035 220 aa7.95□□□□□ -1.14
CFAP54-207ENST00000554821 FSHRP23945 695 aa7.95□□□□□ -1.14
CFAP54-207ENST00000554821 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
CFAP54-207ENST00000554821 SCARF1Q14162 830 aa7.95□□□□□ -1.14
CFAP54-207ENST00000554821 FBXO31Q5XUX0 539 aaPredicted RBP7.95□□□□□ -1.14
CFAP54-207ENST00000554821 UPP2O95045 317 aa7.94□□□□□ -1.14
CFAP54-207ENST00000554821 GRM5P41594 1212 aa7.94□□□□□ -1.14
CFAP54-207ENST00000554821 IRS1P35568 1242 aa7.93□□□□□ -1.14
CFAP54-207ENST00000554821 MRPL14Q6P1L8 145 aaKnown RBP7.93□□□□□ -1.14
CFAP54-207ENST00000554821 CCDC125Q86Z20 511 aa7.93□□□□□ -1.14
CFAP54-207ENST00000554821 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
CFAP54-207ENST00000554821 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
CFAP54-207ENST00000554821 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
CFAP54-207ENST00000554821 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
CFAP54-207ENST00000554821 ZIC2O95409 532 aaPredicted RBP7.92□□□□□ -1.14
CFAP54-207ENST00000554821 HMX1Q9NP08 348 aaPredicted RBP7.92□□□□□ -1.14
CFAP54-207ENST00000554821 MCCD1P59942 119 aaPredicted RBP7.91□□□□□ -1.14
CFAP54-207ENST00000554821 Q8N3U1 123 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 ADAM32Q8TC27 787 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 KRTAP4-12Q9BQ66 201 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 KRTAP9-9Q9BYP9 154 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 KRTAP9-4Q9BYQ2 154 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 PRM3Q9NNZ6 103 aa7.91□□□□□ -1.14
CFAP54-207ENST00000554821 NR3C2P08235 984 aa7.9□□□□□ -1.14
CFAP54-207ENST00000554821 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
CFAP54-207ENST00000554821 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
CFAP54-207ENST00000554821 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
CFAP54-207ENST00000554821 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
CFAP54-207ENST00000554821 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
CFAP54-207ENST00000554821 SEPT12Q8IYM1 358 aa7.89□□□□□ -1.15
CFAP54-207ENST00000554821 MEIOBQ8N635 442 aa7.89□□□□□ -1.15
CFAP54-207ENST00000554821 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
CFAP54-207ENST00000554821 ZBBXA8MT70 800 aa7.88□□□□□ -1.15
CFAP54-207ENST00000554821 MSTNO14793 375 aa7.88□□□□□ -1.15
CFAP54-207ENST00000554821 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
CFAP54-207ENST00000554821 NDUFB9Q9Y6M9 179 aa7.88□□□□□ -1.15
CFAP54-207ENST00000554821 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
CFAP54-207ENST00000554821 EPS8L1Q8TE68 723 aa7.87□□□□□ -1.15
CFAP54-207ENST00000554821 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
CFAP54-207ENST00000554821 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
CFAP54-207ENST00000554821 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
CFAP54-207ENST00000554821 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
CFAP54-207ENST00000554821 INTS6LQ5JSJ4 861 aaKnown RBP7.85□□□□□ -1.15
CFAP54-207ENST00000554821 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
CFAP54-207ENST00000554821 BMP2P12643 396 aa7.84□□□□□ -1.15
CFAP54-207ENST00000554821 KRT76Q01546 638 aa7.84□□□□□ -1.15
CFAP54-207ENST00000554821 NR1H3Q13133 447 aa7.84□□□□□ -1.15
CFAP54-207ENST00000554821 RNF20Q5VTR2 975 aa7.84□□□□□ -1.15
CFAP54-207ENST00000554821 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
CFAP54-207ENST00000554821 Q6ZVU0 165 aa7.84□□□□□ -1.15
CFAP54-207ENST00000554821 PURBQ96QR8 312 aaKnown RBP7.84□□□□□ -1.15
CFAP54-207ENST00000554821 ESPNB1AK53 854 aa7.83□□□□□ -1.16
CFAP54-207ENST00000554821 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
CFAP54-207ENST00000554821 SCARF2Q96GP6 870 aaPredicted RBP7.83□□□□□ -1.16
CFAP54-207ENST00000554821 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
CFAP54-207ENST00000554821 SVOPQ8N4V2 548 aa7.82□□□□□ -1.16
CFAP54-207ENST00000554821 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
CFAP54-207ENST00000554821 MAN1A2O60476 641 aa7.81□□□□□ -1.16
CFAP54-207ENST00000554821 FBXO45P0C2W1 286 aa7.81□□□□□ -1.16
CFAP54-207ENST00000554821 CNTNAP3BQ96NU0 1288 aa7.81□□□□□ -1.16
CFAP54-207ENST00000554821 CNTNAP3Q9BZ76 1288 aa7.81□□□□□ -1.16
CFAP54-207ENST00000554821 PCDHB9Q9Y5E1 797 aa7.81□□□□□ -1.16
CFAP54-207ENST00000554821 ARHGEF15O94989 841 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms