RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 OVOS2A0A0G2JMS6 1433 aa16.75■□□□□ 0.27
TUBB3-204ENST00000554116 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
TUBB3-204ENST00000554116 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
TUBB3-204ENST00000554116 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
TUBB3-204ENST00000554116 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
TUBB3-204ENST00000554116 PLSCR1O15162 318 aa16.74■□□□□ 0.27
TUBB3-204ENST00000554116 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
TUBB3-204ENST00000554116 MARCH10Q8NA82 808 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-204ENST00000554116 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
TUBB3-204ENST00000554116 GOLGB1Q14789 3259 aaKnown RBP16.73■□□□□ 0.27
TUBB3-204ENST00000554116 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
TUBB3-204ENST00000554116 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
TUBB3-204ENST00000554116 KCNQ2O43526 872 aa16.72■□□□□ 0.27
TUBB3-204ENST00000554116 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
TUBB3-204ENST00000554116 BCL9O00512 1426 aa16.71■□□□□ 0.27
TUBB3-204ENST00000554116 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
TUBB3-204ENST00000554116 NFAT5O94916 1531 aa16.71■□□□□ 0.27
TUBB3-204ENST00000554116 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-204ENST00000554116 DDB1Q16531 1140 aa16.71■□□□□ 0.27
TUBB3-204ENST00000554116 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
TUBB3-204ENST00000554116 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
TUBB3-204ENST00000554116 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-204ENST00000554116 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
TUBB3-204ENST00000554116 CARD10Q9BWT7 1032 aa16.67■□□□□ 0.26
TUBB3-204ENST00000554116 PTGER2P43116 358 aa16.66■□□□□ 0.26
TUBB3-204ENST00000554116 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
TUBB3-204ENST00000554116 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-204ENST00000554116 SOX12O15370 315 aa16.64■□□□□ 0.25
TUBB3-204ENST00000554116 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
TUBB3-204ENST00000554116 MYOM1P52179 1685 aa16.64■□□□□ 0.25
TUBB3-204ENST00000554116 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
TUBB3-204ENST00000554116 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
TUBB3-204ENST00000554116 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
TUBB3-204ENST00000554116 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-204ENST00000554116 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
TUBB3-204ENST00000554116 ZBTB7AO95365 584 aa16.62■□□□□ 0.25
TUBB3-204ENST00000554116 ABCC6O95255 1503 aa16.61■□□□□ 0.25
TUBB3-204ENST00000554116 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
TUBB3-204ENST00000554116 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
TUBB3-204ENST00000554116 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
TUBB3-204ENST00000554116 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
TUBB3-204ENST00000554116 TNS2Q63HR2 1409 aa16.61■□□□□ 0.25
TUBB3-204ENST00000554116 EXOC5O00471 708 aa16.6■□□□□ 0.25
TUBB3-204ENST00000554116 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
TUBB3-204ENST00000554116 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
TUBB3-204ENST00000554116 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
TUBB3-204ENST00000554116 LTN1O94822 1766 aa16.59■□□□□ 0.25
TUBB3-204ENST00000554116 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
TUBB3-204ENST00000554116 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-204ENST00000554116 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
TUBB3-204ENST00000554116 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
TUBB3-204ENST00000554116 NME9Q86XW9 330 aa16.58■□□□□ 0.24
TUBB3-204ENST00000554116 ERBB3P21860 1342 aa16.57■□□□□ 0.24
TUBB3-204ENST00000554116 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
TUBB3-204ENST00000554116 BTAF1O14981 1849 aa16.56■□□□□ 0.24
TUBB3-204ENST00000554116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.24
TUBB3-204ENST00000554116 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-204ENST00000554116 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
TUBB3-204ENST00000554116 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 SLC12A5Q9H2X9 1139 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
TUBB3-204ENST00000554116 FHDC1Q9C0D6 1143 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-204ENST00000554116 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
TUBB3-204ENST00000554116 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
TUBB3-204ENST00000554116 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
TUBB3-204ENST00000554116 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
TUBB3-204ENST00000554116 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
TUBB3-204ENST00000554116 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
TUBB3-204ENST00000554116 IL2RBP14784 551 aa16.5■□□□□ 0.23
TUBB3-204ENST00000554116 A0A1W2PP64 1363 aa16.5■□□□□ 0.23
TUBB3-204ENST00000554116 CHD4Q14839 1912 aa16.49■□□□□ 0.23
TUBB3-204ENST00000554116 EDC4Q6P2E9 1401 aaKnown RBP16.49■□□□□ 0.23
TUBB3-204ENST00000554116 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
TUBB3-204ENST00000554116 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
TUBB3-204ENST00000554116 RGPD2P0DJD1 1756 aa16.48■□□□□ 0.23
TUBB3-204ENST00000554116 FAM208AQ9UK61 1670 aaKnown RBP16.47■□□□□ 0.23
TUBB3-204ENST00000554116 FBLN1P23142 703 aa16.47■□□□□ 0.23
TUBB3-204ENST00000554116 TMC1Q8TDI8 760 aa16.47■□□□□ 0.23
TUBB3-204ENST00000554116 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
TUBB3-204ENST00000554116 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
TUBB3-204ENST00000554116 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
TUBB3-204ENST00000554116 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
TUBB3-204ENST00000554116 IP6K1Q92551 441 aa16.46■□□□□ 0.23
TUBB3-204ENST00000554116 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
TUBB3-204ENST00000554116 ARXQ96QS3 562 aa16.45■□□□□ 0.22
TUBB3-204ENST00000554116 TESK2Q96S53 571 aa16.45■□□□□ 0.22
TUBB3-204ENST00000554116 NSD2O96028 1365 aa16.45■□□□□ 0.22
TUBB3-204ENST00000554116 KCNQ4P56696 695 aa16.44■□□□□ 0.22
TUBB3-204ENST00000554116 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-204ENST00000554116 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
TUBB3-204ENST00000554116 LY75O60449 1722 aa16.44■□□□□ 0.22
TUBB3-204ENST00000554116 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
TUBB3-204ENST00000554116 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
TUBB3-204ENST00000554116 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
TUBB3-204ENST00000554116 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
TUBB3-204ENST00000554116 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
TUBB3-204ENST00000554116 MEGF6O75095 1541 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms