RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.55
SIX4-202ENST00000554079 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.55
SIX4-202ENST00000554079 RAD50Q92878 1312 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 MAGI2Q86UL8 1455 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
SIX4-202ENST00000554079 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 ADCY5O95622 1261 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 TNNT3P45378 269 aaPredicted RBP11.58□□□□□ -0.56
SIX4-202ENST00000554079 CT47A1Q5JQC4 288 aaPredicted RBP11.58□□□□□ -0.56
SIX4-202ENST00000554079 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 ZNF446Q9NWS9 450 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 TCHHQ07283 1943 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 PLB1Q6P1J6 1458 aa11.58□□□□□ -0.56
SIX4-202ENST00000554079 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
SIX4-202ENST00000554079 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 NAA30Q147X3 362 aaPredicted RBP11.57□□□□□ -0.56
SIX4-202ENST00000554079 MUM1L1Q5H9M0 696 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
SIX4-202ENST00000554079 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 ZNF397Q8NF99 534 aaPredicted RBP11.57□□□□□ -0.56
SIX4-202ENST00000554079 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.57□□□□□ -0.56
SIX4-202ENST00000554079 NUP160Q12769 1436 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 MYOM1P52179 1685 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
SIX4-202ENST00000554079 EP400NLQ6ZTU2 488 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 GPRASP1Q5JY77 1395 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
SIX4-202ENST00000554079 GUCY2CP25092 1073 aa11.56□□□□□ -0.56
SIX4-202ENST00000554079 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
SIX4-202ENST00000554079 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
SIX4-202ENST00000554079 SHPRHQ149N8 1683 aa11.56□□□□□ -0.56
SIX4-202ENST00000554079 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
SIX4-202ENST00000554079 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 TESK2Q96S53 571 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 TMX1Q9H3N1 280 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 TSGA10IPQ3SY00 556 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
SIX4-202ENST00000554079 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
SIX4-202ENST00000554079 CASQ1P31415 396 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 PKD2Q13563 968 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 PPRC1Q5VV67 1664 aaKnown RBP11.54□□□□□ -0.56
SIX4-202ENST00000554079 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
SIX4-202ENST00000554079 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 ANKRD50Q9ULJ7 1429 aa11.54□□□□□ -0.56
SIX4-202ENST00000554079 GYS2P54840 703 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 BMP2KLQ5H9B9 411 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
SIX4-202ENST00000554079 TPM3P06753 285 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 SLC26A8Q96RN1 970 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 ATP10AO60312 1499 aa11.53□□□□□ -0.56
SIX4-202ENST00000554079 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.56
SIX4-202ENST00000554079 RABEP1Q15276 862 aa11.52□□□□□ -0.56
SIX4-202ENST00000554079 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.56
SIX4-202ENST00000554079 SYT10Q6XYQ8 523 aa11.52□□□□□ -0.56
SIX4-202ENST00000554079 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.56
SIX4-202ENST00000554079 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.56
SIX4-202ENST00000554079 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.56
SIX4-202ENST00000554079 ADGRL2O95490 1459 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 MYO1CO00159 1063 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 CCDC172P0C7W6 258 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 NUCB1Q02818 461 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 EGFL6Q8IUX8 553 aa11.52□□□□□ -0.57
SIX4-202ENST00000554079 TRIM66O15016 1216 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 KDM4AO75164 1064 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 PHF14O94880 888 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 FBXO38Q6PIJ6 1188 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
SIX4-202ENST00000554079 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
SIX4-202ENST00000554079 ERBB3P21860 1342 aa11.51□□□□□ -0.57
SIX4-202ENST00000554079 CEP120Q8N960 986 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 ADCY10Q96PN6 1610 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
SIX4-202ENST00000554079 AP5Z1O43299 807 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 C10orf67Q8IYJ2 551 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 LCMT1Q9UIC8 334 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
SIX4-202ENST00000554079 CCDC112Q8NEF3 446 aa11.49□□□□□ -0.57
SIX4-202ENST00000554079 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
SIX4-202ENST00000554079 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 NEK11Q8NG66 645 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 KANK1Q14678 1352 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 PTPRCP08575 1304 aa11.48□□□□□ -0.57
SIX4-202ENST00000554079 SATB1Q01826 763 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms