RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 LARP1Q6PKG0 1096 aaKnown RBP32.12■■■□□ 2.73
NEK9-203ENST00000553945 AXIN2Q9Y2T1 843 aa32.12■■■□□ 2.73
NEK9-203ENST00000553945 RGPD5Q99666 1765 aa32.12■■■□□ 2.73
NEK9-203ENST00000553945 FAM98CQ17RN3 349 aaKnown RBP32.11■■■□□ 2.73
NEK9-203ENST00000553945 PANK3Q9H999 370 aa32.11■■■□□ 2.73
NEK9-203ENST00000553945 SPATA31A1Q5TZJ5 1347 aa32.1■■■□□ 2.73
NEK9-203ENST00000553945 A0A0G2JS52 829 aa32.09■■■□□ 2.73
NEK9-203ENST00000553945 MYT1Q01538 1121 aa32.09■■■□□ 2.73
NEK9-203ENST00000553945 USP35Q9P2H5 1018 aa32.09■■■□□ 2.73
NEK9-203ENST00000553945 ONECUT3O60422 494 aaPredicted RBP32.08■■■□□ 2.73
NEK9-203ENST00000553945 SEPT12Q8IYM1 358 aa32.08■■■□□ 2.73
NEK9-203ENST00000553945 ABCC6O95255 1503 aa32.07■■■□□ 2.72
NEK9-203ENST00000553945 CGNL1Q0VF96 1302 aa32.06■■■□□ 2.72
NEK9-203ENST00000553945 BRWD3Q6RI45 1802 aa32.05■■■□□ 2.72
NEK9-203ENST00000553945 FBLN1P23142 703 aa32.04■■■□□ 2.72
NEK9-203ENST00000553945 CRB1P82279 1406 aa32.02■■■□□ 2.72
NEK9-203ENST00000553945 CSB-PGBD3P0DP91 1061 aa32.02■■■□□ 2.72
NEK9-203ENST00000553945 TOM1L2Q6ZVM7 507 aa32.02■■■□□ 2.72
NEK9-203ENST00000553945 WDR17Q8IZU2 1322 aa32.01■■■□□ 2.72
NEK9-203ENST00000553945 CCDC7Q96M83 1385 aa32.01■■■□□ 2.71
NEK9-203ENST00000553945 TCP11L2Q8N4U5 519 aa32■■■□□ 2.71
NEK9-203ENST00000553945 MAP3K19Q56UN5 1328 aa32■■■□□ 2.71
NEK9-203ENST00000553945 WASHC2AQ641Q2 1341 aa31.99■■■□□ 2.71
NEK9-203ENST00000553945 THSD7AQ9UPZ6 1657 aa31.99■■■□□ 2.71
NEK9-203ENST00000553945 AMPHP49418 695 aa31.97■■■□□ 2.71
NEK9-203ENST00000553945 RRS1Q15050 365 aaKnown RBP31.97■■■□□ 2.71
NEK9-203ENST00000553945 IP6K1Q92551 441 aa31.97■■■□□ 2.71
NEK9-203ENST00000553945 BARGINQ6ZT62 677 aa31.96■■■□□ 2.71
NEK9-203ENST00000553945 THRAP3Q9Y2W1 955 aaKnown RBP31.96■■■□□ 2.71
NEK9-203ENST00000553945 ANKRD26Q9UPS8 1709 aa31.95■■■□□ 2.71
NEK9-203ENST00000553945 KRT27Q7Z3Y8 459 aa31.95■■■□□ 2.71
NEK9-203ENST00000553945 UPF1Q92900 1129 aaKnown RBP eCLIP31.95■■■□□ 2.71
NEK9-203ENST00000553945 EP400Q96L91 3159 aa31.95■■■□□ 2.71
NEK9-203ENST00000553945 BLMP54132 1417 aaPredicted RBP31.94■■■□□ 2.7
NEK9-203ENST00000553945 ANKRD24Q8TF21 1146 aa31.94■■■□□ 2.7
NEK9-203ENST00000553945 HOXC9P31274 260 aa31.93■■■□□ 2.7
NEK9-203ENST00000553945 KNSTRNQ9Y448 316 aa31.93■■■□□ 2.7
NEK9-203ENST00000553945 ERBB3P21860 1342 aa31.93■■■□□ 2.7
NEK9-203ENST00000553945 CARD10Q9BWT7 1032 aa31.92■■■□□ 2.7
NEK9-203ENST00000553945 LTV1Q96GA3 475 aaPredicted RBP31.91■■■□□ 2.7
NEK9-203ENST00000553945 NLRP2Q9NX02 1062 aa31.89■■■□□ 2.7
NEK9-203ENST00000553945 RTL1A6NKG5 1358 aa31.89■■■□□ 2.7
NEK9-203ENST00000553945 NSD2O96028 1365 aa31.88■■■□□ 2.69
NEK9-203ENST00000553945 TNNT2P45379 298 aaPredicted RBP31.87■■■□□ 2.69
NEK9-203ENST00000553945 WNK3Q9BYP7 1800 aa31.86■■■□□ 2.69
NEK9-203ENST00000553945 PEAK1Q9H792 1746 aa31.86■■■□□ 2.69
NEK9-203ENST00000553945 ZEB1P37275 1124 aaPredicted RBP31.85■■■□□ 2.69
NEK9-203ENST00000553945 PARP4Q9UKK3 1724 aaKnown RBP31.85■■■□□ 2.69
NEK9-203ENST00000553945 FAM208AQ9UK61 1670 aaKnown RBP31.84■■■□□ 2.69
NEK9-203ENST00000553945 EMILIN1Q9Y6C2 1016 aa31.84■■■□□ 2.69
NEK9-203ENST00000553945 FAM182BQ5T319 152 aa31.83■■■□□ 2.69
NEK9-203ENST00000553945 MAP2P11137 1827 aaKnown RBP31.83■■■□□ 2.69
NEK9-203ENST00000553945 FLT4P35916 1363 aa31.82■■■□□ 2.69
NEK9-203ENST00000553945 KIF24Q5T7B8 1368 aa31.82■■■□□ 2.69
NEK9-203ENST00000553945 PPM1GO15355 546 aaPredicted RBP31.82■■■□□ 2.68
NEK9-203ENST00000553945 PDE3BQ13370 1112 aa31.82■■■□□ 2.68
NEK9-203ENST00000553945 MORC1Q86VD1 984 aa31.82■■■□□ 2.68
NEK9-203ENST00000553945 HSP90AB2PQ58FF8 381 aa31.81■■■□□ 2.68
NEK9-203ENST00000553945 AMER1Q5JTC6 1135 aaPredicted RBP31.81■■■□□ 2.68
NEK9-203ENST00000553945 PER1O15534 1290 aaPredicted RBP31.8■■■□□ 2.68
NEK9-203ENST00000553945 CDCA7Q9BWT1 371 aaPredicted RBP31.8■■■□□ 2.68
NEK9-203ENST00000553945 INSRP06213 1382 aa31.79■■■□□ 2.68
NEK9-203ENST00000553945 LRRC37A3O60309 1634 aa31.78■■■□□ 2.68
NEK9-203ENST00000553945 SMG6Q86US8 1419 aaKnown RBP31.78■■■□□ 2.68
NEK9-203ENST00000553945 DDB1Q16531 1140 aa31.78■■■□□ 2.68
NEK9-203ENST00000553945 POLKQ9UBT6 870 aa31.78■■■□□ 2.68
NEK9-203ENST00000553945 RGPD2P0DJD1 1756 aa31.78■■■□□ 2.68
NEK9-203ENST00000553945 DISP2A7MBM2 1401 aa31.77■■■□□ 2.68
NEK9-203ENST00000553945 CCDC125Q86Z20 511 aa31.74■■■□□ 2.67
NEK9-203ENST00000553945 CC2D1BQ5T0F9 858 aaKnown RBP31.73■■■□□ 2.67
NEK9-203ENST00000553945 IL2RBP14784 551 aa31.72■■■□□ 2.67
NEK9-203ENST00000553945 CNGB1Q14028 1251 aaPredicted RBP31.71■■■□□ 2.67
NEK9-203ENST00000553945 EXOC5O00471 708 aa31.7■■■□□ 2.67
NEK9-203ENST00000553945 NBPF6Q5VWK0 638 aa31.7■■■□□ 2.67
NEK9-203ENST00000553945 FAM196AQ6ZSG2 479 aa31.7■■■□□ 2.67
NEK9-203ENST00000553945 NBPF4Q96M43 638 aa31.7■■■□□ 2.67
NEK9-203ENST00000553945 SF3B2Q13435 895 aaKnown RBP31.68■■■□□ 2.66
NEK9-203ENST00000553945 USHBP1Q8N6Y0 703 aa31.68■■■□□ 2.66
NEK9-203ENST00000553945 TNS2Q63HR2 1409 aa31.66■■■□□ 2.66
NEK9-203ENST00000553945 NPC1L1Q9UHC9 1359 aa31.66■■■□□ 2.66
NEK9-203ENST00000553945 OVOS2A0A0G2JMS6 1433 aa31.65■■■□□ 2.66
NEK9-203ENST00000553945 RGPD1P0DJD0 1748 aa31.64■■■□□ 2.66
NEK9-203ENST00000553945 MARCH10Q8NA82 808 aaPredicted RBP31.64■■■□□ 2.66
NEK9-203ENST00000553945 TRIM37O94972 964 aa31.62■■■□□ 2.65
NEK9-203ENST00000553945 EIF4A2Q14240 407 aaKnown RBP31.6■■■□□ 2.65
NEK9-203ENST00000553945 MEGF6O75095 1541 aa31.59■■■□□ 2.65
NEK9-203ENST00000553945 RAPGEF4Q8WZA2 1011 aa31.59■■■□□ 2.65
NEK9-203ENST00000553945 TNS1Q9HBL0 1735 aaKnown RBP31.58■■■□□ 2.65
NEK9-203ENST00000553945 DEFB132Q7Z7B7 95 aa31.58■■■□□ 2.65
NEK9-203ENST00000553945 EYA1Q99502 592 aa31.57■■■□□ 2.64
NEK9-203ENST00000553945 TATP17735 454 aaPredicted RBP31.55■■■□□ 2.64
NEK9-203ENST00000553945 BAG6P46379 1132 aa31.55■■■□□ 2.64
NEK9-203ENST00000553945 MTHFSP49914 203 aa31.55■■■□□ 2.64
NEK9-203ENST00000553945 SBF2Q86WG5 1849 aa31.54■■■□□ 2.64
NEK9-203ENST00000553945 DDX54Q8TDD1 881 aaKnown RBP31.54■■■□□ 2.64
NEK9-203ENST00000553945 ZCRB1Q8TBF4 217 aaKnown RBP31.53■■■□□ 2.64
NEK9-203ENST00000553945 NCAPD2Q15021 1401 aa31.52■■■□□ 2.64
NEK9-203ENST00000553945 BCL9O00512 1426 aa31.51■■■□□ 2.64
NEK9-203ENST00000553945 APBA3O96018 575 aa31.5■■■□□ 2.63
NEK9-203ENST00000553945 DDX10Q13206 875 aaKnown RBP31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms