RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 RAB15P59190 212 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 PDE4CQ08493 712 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 DEPDC4Q8N2C3 294 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 PLPP7Q8NBV4 271 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 VRTNQ9H8Y1 702 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 DOLKQ9UPQ8 538 aa6.66□□□□□ -1.34
EFCAB11-204ENST00000553871 GIGYF1O75420 1035 aaPredicted RBP6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 SKOR1P84550 965 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 EML3Q32P44 896 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 MAP7D1Q3KQU3 841 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 VASH1Q7L8A9 365 aaPredicted RBP6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 PLEKHM2Q8IWE5 1019 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 TRMT44Q8IYL2 757 aaKnown RBP6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 PLA2G2EQ9NZK7 142 aa6.65□□□□□ -1.34
EFCAB11-204ENST00000553871 SLC19A1P41440 591 aa6.64□□□□□ -1.35
EFCAB11-204ENST00000553871 NCOA4Q13772 614 aa6.64□□□□□ -1.35
EFCAB11-204ENST00000553871 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
EFCAB11-204ENST00000553871 RC3H1Q5TC82 1133 aaKnown RBP6.64□□□□□ -1.35
EFCAB11-204ENST00000553871 IFFO2Q5TF58 517 aa6.64□□□□□ -1.35
EFCAB11-204ENST00000553871 LZTS3O60299 673 aaPredicted RBP6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 LARP1Q6PKG0 1096 aaKnown RBP6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 CCDC125Q86Z20 511 aa6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 SEPT12Q8IYM1 358 aa6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 KCTD15Q96SI1 283 aaPredicted RBP6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 ESF1Q9H501 851 aaKnown RBP6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 PCDHB11Q9Y5F2 797 aa6.63□□□□□ -1.35
EFCAB11-204ENST00000553871 ATP5J2-PTCD1G3V325 749 aa6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 PHTF2Q8N3S3 785 aa6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 MKRN1Q9UHC7 482 aaKnown RBP6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 NOD1Q9Y239 953 aa6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 MAP4K5Q9Y4K4 846 aa6.62□□□□□ -1.35
EFCAB11-204ENST00000553871 A0A0G2JS52 829 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 ATG7O95352 703 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 RASA1P20936 1047 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 FSHRP23945 695 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 ATP1A2P50993 1020 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 TRIM52Q96A61 297 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 SIRT1Q96EB6 747 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 CCDC85AQ96PX6 553 aaPredicted RBP6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 USTQ9Y2C2 406 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 RBM19Q9Y4C8 960 aaKnown RBP6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 TLL2Q9Y6L7 1015 aa6.61□□□□□ -1.35
EFCAB11-204ENST00000553871 ESPNB1AK53 854 aa6.6□□□□□ -1.35
EFCAB11-204ENST00000553871 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
EFCAB11-204ENST00000553871 SRPK2P78362 688 aaKnown RBP6.6□□□□□ -1.35
EFCAB11-204ENST00000553871 PSME1Q06323 249 aa6.6□□□□□ -1.35
EFCAB11-204ENST00000553871 KANK4Q5T7N3 995 aaPredicted RBP6.6□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L10C9JJH3 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L12C9JPN9 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L21D6R901 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 WNT7AO00755 349 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 USP4Q13107 963 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 INTS6LQ5JSJ4 861 aaKnown RBP6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 ZNF697Q5TEC3 545 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 TRAF7Q6Q0C0 670 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 CHIC2Q9UKJ5 165 aa6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 NOVA2Q9UNW9 492 aaKnown RBP6.59□□□□□ -1.35
EFCAB11-204ENST00000553871 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 FAM196BA6NMK8 535 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 GTF2IP78347 998 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 FOXC1Q12948 553 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 TSGA10IPQ3SY00 556 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 ZNF594Q96JF6 807 aaPredicted RBP6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 MRGPRX2Q96LB1 330 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 PRKD2Q9BZL6 878 aa6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 DNAAF2Q9NVR5 837 aaKnown RBP6.58□□□□□ -1.36
EFCAB11-204ENST00000553871 ERVH48-1M5A8F1 160 aa6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 ADH1CP00326 375 aa6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 ELOAQ14241 798 aaKnown RBP6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 CRTC2Q53ET0 693 aaPredicted RBP6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 ZNF598Q86UK7 904 aaKnown RBP6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 EMID1Q96A84 441 aaPredicted RBP6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 CDK15Q96Q40 435 aa6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 CDCA7Q9BWT1 371 aaPredicted RBP6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 WASF2Q9Y6W5 498 aa6.57□□□□□ -1.36
EFCAB11-204ENST00000553871 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 NR5A1Q13285 461 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 AEBP1Q8IUX7 1158 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 CCDC116Q8IYX3 515 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 MPNDQ8N594 471 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 KCTD17Q8N5Z5 321 aa6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms