RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 ANKRD26Q9UPS8 1709 aa14.02□□□□□ -0.16
CALCOCO1-222ENST00000553154 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
CALCOCO1-222ENST00000553154 SPATA31A1Q5TZJ5 1347 aa14.01□□□□□ -0.17
CALCOCO1-222ENST00000553154 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
CALCOCO1-222ENST00000553154 NSD2O96028 1365 aa14□□□□□ -0.17
CALCOCO1-222ENST00000553154 MAP3K19Q56UN5 1328 aa14□□□□□ -0.17
CALCOCO1-222ENST00000553154 COG3Q96JB2 828 aa14□□□□□ -0.17
CALCOCO1-222ENST00000553154 LTN1O94822 1766 aa14□□□□□ -0.17
CALCOCO1-222ENST00000553154 PEAK1Q9H792 1746 aa14□□□□□ -0.17
CALCOCO1-222ENST00000553154 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-222ENST00000553154 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
CALCOCO1-222ENST00000553154 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
CALCOCO1-222ENST00000553154 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-222ENST00000553154 CRB1P82279 1406 aa13.98□□□□□ -0.17
CALCOCO1-222ENST00000553154 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-222ENST00000553154 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-222ENST00000553154 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
CALCOCO1-222ENST00000553154 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
CALCOCO1-222ENST00000553154 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 ERBB3P21860 1342 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 SOX12O15370 315 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 FBLN1P23142 703 aa13.97□□□□□ -0.17
CALCOCO1-222ENST00000553154 ZEB1P37275 1124 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-222ENST00000553154 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
CALCOCO1-222ENST00000553154 RGPD5Q99666 1765 aa13.96□□□□□ -0.18
CALCOCO1-222ENST00000553154 IP6K1Q92551 441 aa13.95□□□□□ -0.18
CALCOCO1-222ENST00000553154 STRN4Q9NRL3 753 aa13.95□□□□□ -0.18
CALCOCO1-222ENST00000553154 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
CALCOCO1-222ENST00000553154 HOXC9P31274 260 aa13.94□□□□□ -0.18
CALCOCO1-222ENST00000553154 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
CALCOCO1-222ENST00000553154 FAM208AQ9UK61 1670 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-222ENST00000553154 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-222ENST00000553154 RRS1Q15050 365 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-222ENST00000553154 INSRP06213 1382 aa13.93□□□□□ -0.18
CALCOCO1-222ENST00000553154 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
CALCOCO1-222ENST00000553154 FAM98CQ17RN3 349 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 TCP11L2Q8N4U5 519 aa13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 FLT4P35916 1363 aa13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 BRWD3Q6RI45 1802 aa13.92□□□□□ -0.18
CALCOCO1-222ENST00000553154 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
CALCOCO1-222ENST00000553154 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
CALCOCO1-222ENST00000553154 EMILIN1Q9Y6C2 1016 aa13.91□□□□□ -0.18
CALCOCO1-222ENST00000553154 EVA1CP58658 441 aa13.9□□□□□ -0.18
CALCOCO1-222ENST00000553154 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
CALCOCO1-222ENST00000553154 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
CALCOCO1-222ENST00000553154 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
CALCOCO1-222ENST00000553154 EP400Q96L91 3159 aa13.89□□□□□ -0.19
CALCOCO1-222ENST00000553154 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
CALCOCO1-222ENST00000553154 AMPHP49418 695 aa13.87□□□□□ -0.19
CALCOCO1-222ENST00000553154 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
CALCOCO1-222ENST00000553154 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
CALCOCO1-222ENST00000553154 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
CALCOCO1-222ENST00000553154 BCL9O00512 1426 aa13.86□□□□□ -0.19
CALCOCO1-222ENST00000553154 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-222ENST00000553154 MEGF6O75095 1541 aa13.85□□□□□ -0.19
CALCOCO1-222ENST00000553154 NBPF6Q5VWK0 638 aa13.85□□□□□ -0.19
CALCOCO1-222ENST00000553154 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
CALCOCO1-222ENST00000553154 NBPF4Q96M43 638 aa13.85□□□□□ -0.19
CALCOCO1-222ENST00000553154 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
CALCOCO1-222ENST00000553154 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
CALCOCO1-222ENST00000553154 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
CALCOCO1-222ENST00000553154 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
CALCOCO1-222ENST00000553154 CDCA7Q9BWT1 371 aaPredicted RBP13.84□□□□□ -0.19
CALCOCO1-222ENST00000553154 MAP2P11137 1827 aaKnown RBP13.83□□□□□ -0.2
CALCOCO1-222ENST00000553154 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
CALCOCO1-222ENST00000553154 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
CALCOCO1-222ENST00000553154 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.2
CALCOCO1-222ENST00000553154 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
CALCOCO1-222ENST00000553154 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-222ENST00000553154 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-222ENST00000553154 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
CALCOCO1-222ENST00000553154 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO1-222ENST00000553154 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
CALCOCO1-222ENST00000553154 PLEKHG2Q9H7P9 1386 aa13.81□□□□□ -0.2
CALCOCO1-222ENST00000553154 IL2RBP14784 551 aa13.8□□□□□ -0.2
CALCOCO1-222ENST00000553154 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-222ENST00000553154 TNS1Q9HBL0 1735 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-222ENST00000553154 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
CALCOCO1-222ENST00000553154 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
CALCOCO1-222ENST00000553154 EYA1Q99502 592 aa13.79□□□□□ -0.2
CALCOCO1-222ENST00000553154 A0A0G2JS52 829 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 IL13P35225 146 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 MTHFSP49914 203 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 MYT1Q01538 1121 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 DDB1Q16531 1140 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 KDRP35968 1356 aa13.78□□□□□ -0.2
CALCOCO1-222ENST00000553154 PPM1GO15355 546 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-222ENST00000553154 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
CALCOCO1-222ENST00000553154 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
CALCOCO1-222ENST00000553154 PDE3BQ13370 1112 aa13.75□□□□□ -0.21
CALCOCO1-222ENST00000553154 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
CALCOCO1-222ENST00000553154 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
CALCOCO1-222ENST00000553154 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
CALCOCO1-222ENST00000553154 EXOC5O00471 708 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms