RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 XP32Q5T750 250 aa8.77□□□□□ -1.01
HCFC2-206ENST00000552343 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
HCFC2-206ENST00000552343 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
HCFC2-206ENST00000552343 CBLBQ13191 982 aa8.76□□□□□ -1.01
HCFC2-206ENST00000552343 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
HCFC2-206ENST00000552343 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
HCFC2-206ENST00000552343 IRS1P35568 1242 aa8.75□□□□□ -1.01
HCFC2-206ENST00000552343 SPINT1O43278 529 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 QPCTQ16769 361 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
HCFC2-206ENST00000552343 GPAT2Q6NUI2 795 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 Q6ZVU0 165 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 VWA5B2Q8N398 1253 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 LIMD1Q9UGP4 676 aa8.74□□□□□ -1.01
HCFC2-206ENST00000552343 NUTM2BA6NNL0 878 aaPredicted RBP8.73□□□□□ -1.01
HCFC2-206ENST00000552343 NUTM2EB1AL46 878 aaPredicted RBP8.73□□□□□ -1.01
HCFC2-206ENST00000552343 NUTM2DQ5VT03 806 aaPredicted RBP8.73□□□□□ -1.01
HCFC2-206ENST00000552343 NUTM2AQ8IVF1 878 aaPredicted RBP8.73□□□□□ -1.01
HCFC2-206ENST00000552343 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
HCFC2-206ENST00000552343 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
HCFC2-206ENST00000552343 LILRB3O75022 631 aa8.72□□□□□ -1.01
HCFC2-206ENST00000552343 ITGA6P23229 1130 aa8.72□□□□□ -1.01
HCFC2-206ENST00000552343 ERFEQ4G0M1 354 aa8.72□□□□□ -1.01
HCFC2-206ENST00000552343 DNMT3AQ9Y6K1 912 aaPredicted RBP8.72□□□□□ -1.01
HCFC2-206ENST00000552343 CDC14CA4D256 554 aa8.71□□□□□ -1.02
HCFC2-206ENST00000552343 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
HCFC2-206ENST00000552343 TRIM66O15016 1216 aa8.7□□□□□ -1.02
HCFC2-206ENST00000552343 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
HCFC2-206ENST00000552343 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
HCFC2-206ENST00000552343 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
HCFC2-206ENST00000552343 IGHA1P01876 353 aa8.69□□□□□ -1.02
HCFC2-206ENST00000552343 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
HCFC2-206ENST00000552343 RTL5Q5HYW3 569 aaPredicted RBP8.69□□□□□ -1.02
HCFC2-206ENST00000552343 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
HCFC2-206ENST00000552343 KANK3Q6NY19 840 aa8.68□□□□□ -1.02
HCFC2-206ENST00000552343 HELBQ8NG08 1087 aaPredicted RBP8.68□□□□□ -1.02
HCFC2-206ENST00000552343 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
HCFC2-206ENST00000552343 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
HCFC2-206ENST00000552343 INSM2Q96T92 566 aaPredicted RBP8.67□□□□□ -1.02
HCFC2-206ENST00000552343 KRTAP4-8Q9BYQ9 185 aa8.67□□□□□ -1.02
HCFC2-206ENST00000552343 RELBQ01201 579 aa8.66□□□□□ -1.02
HCFC2-206ENST00000552343 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
HCFC2-206ENST00000552343 SCARF2Q96GP6 870 aaPredicted RBP8.66□□□□□ -1.02
HCFC2-206ENST00000552343 ADAMTS2O95450 1211 aa8.65□□□□□ -1.02
HCFC2-206ENST00000552343 FOXK2Q01167 660 aa8.65□□□□□ -1.02
HCFC2-206ENST00000552343 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
HCFC2-206ENST00000552343 SENP3-EIF4A1A0A087X0R7 540 aa8.64□□□□□ -1.03
HCFC2-206ENST00000552343 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
HCFC2-206ENST00000552343 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
HCFC2-206ENST00000552343 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
HCFC2-206ENST00000552343 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
HCFC2-206ENST00000552343 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
HCFC2-206ENST00000552343 AK7Q96M32 723 aa8.63□□□□□ -1.03
HCFC2-206ENST00000552343 CDV3Q9UKY7 258 aaKnown RBP8.63□□□□□ -1.03
HCFC2-206ENST00000552343 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
HCFC2-206ENST00000552343 ZNF395Q9H8N7 513 aaPredicted RBP8.62□□□□□ -1.03
HCFC2-206ENST00000552343 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
HCFC2-206ENST00000552343 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
HCFC2-206ENST00000552343 SRSF11Q05519 484 aaKnown RBP8.61□□□□□ -1.03
HCFC2-206ENST00000552343 CTDSPL2Q05D32 466 aa8.61□□□□□ -1.03
HCFC2-206ENST00000552343 TMEM132AQ24JP5 1023 aa8.61□□□□□ -1.03
HCFC2-206ENST00000552343 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
HCFC2-206ENST00000552343 GAS6Q14393 721 aa8.6□□□□□ -1.03
HCFC2-206ENST00000552343 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
HCFC2-206ENST00000552343 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
HCFC2-206ENST00000552343 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
HCFC2-206ENST00000552343 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
HCFC2-206ENST00000552343 FKBPLQ9UIM3 349 aa8.59□□□□□ -1.03
HCFC2-206ENST00000552343 PDE4DQ08499 809 aa8.58□□□□□ -1.04
HCFC2-206ENST00000552343 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
HCFC2-206ENST00000552343 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
HCFC2-206ENST00000552343 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
HCFC2-206ENST00000552343 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
HCFC2-206ENST00000552343 ADH1AP07327 375 aa8.56□□□□□ -1.04
HCFC2-206ENST00000552343 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
HCFC2-206ENST00000552343 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
HCFC2-206ENST00000552343 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
HCFC2-206ENST00000552343 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
HCFC2-206ENST00000552343 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
HCFC2-206ENST00000552343 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
HCFC2-206ENST00000552343 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
HCFC2-206ENST00000552343 NR6A1Q15406 480 aa8.55□□□□□ -1.04
HCFC2-206ENST00000552343 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
HCFC2-206ENST00000552343 ENAMQ9NRM1 1142 aa8.55□□□□□ -1.04
HCFC2-206ENST00000552343 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
HCFC2-206ENST00000552343 MSTNO14793 375 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 LILRA1O75019 489 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 ADAM23O75077 832 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 PTGIRP43119 386 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 RAB15P59190 212 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 PTK2Q05397 1052 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 LYSMD3Q7Z3D4 306 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
HCFC2-206ENST00000552343 ITGB2P05107 769 aa8.53□□□□□ -1.04
HCFC2-206ENST00000552343 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms