RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 COL18A1P39060 1754 aa20.75■□□□□ 0.91
SMARCD1-211ENST00000551497 DDX10Q13206 875 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-211ENST00000551497 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-211ENST00000551497 GJD4Q96KN9 370 aaPredicted RBP20.75■□□□□ 0.91
SMARCD1-211ENST00000551497 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
SMARCD1-211ENST00000551497 RBM6P78332 1123 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-211ENST00000551497 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-211ENST00000551497 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
SMARCD1-211ENST00000551497 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
SMARCD1-211ENST00000551497 RGPD5Q99666 1765 aa20.72■□□□□ 0.91
SMARCD1-211ENST00000551497 AMPHP49418 695 aa20.72■□□□□ 0.91
SMARCD1-211ENST00000551497 IP6K1Q92551 441 aa20.72■□□□□ 0.91
SMARCD1-211ENST00000551497 NRAPQ86VF7 1730 aa20.72■□□□□ 0.91
SMARCD1-211ENST00000551497 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
SMARCD1-211ENST00000551497 LTN1O94822 1766 aa20.71■□□□□ 0.91
SMARCD1-211ENST00000551497 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 HOXC9P31274 260 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 USP35Q9P2H5 1018 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 NSD2O96028 1365 aa20.7■□□□□ 0.9
SMARCD1-211ENST00000551497 COL5A2P05997 1499 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-211ENST00000551497 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-211ENST00000551497 LTV1Q96GA3 475 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-211ENST00000551497 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
SMARCD1-211ENST00000551497 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
SMARCD1-211ENST00000551497 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
SMARCD1-211ENST00000551497 ANKRD24Q8TF21 1146 aa20.67■□□□□ 0.9
SMARCD1-211ENST00000551497 SPATA31A1Q5TZJ5 1347 aa20.67■□□□□ 0.9
SMARCD1-211ENST00000551497 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
SMARCD1-211ENST00000551497 TOM1L2Q6ZVM7 507 aa20.66■□□□□ 0.9
SMARCD1-211ENST00000551497 GLI3P10071 1580 aa20.66■□□□□ 0.9
SMARCD1-211ENST00000551497 MAP2P11137 1827 aaKnown RBP20.66■□□□□ 0.9
SMARCD1-211ENST00000551497 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
SMARCD1-211ENST00000551497 WDR17Q8IZU2 1322 aa20.65■□□□□ 0.9
SMARCD1-211ENST00000551497 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
SMARCD1-211ENST00000551497 ERBB3P21860 1342 aa20.63■□□□□ 0.89
SMARCD1-211ENST00000551497 ONECUT3O60422 494 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-211ENST00000551497 NLRP2Q9NX02 1062 aa20.63■□□□□ 0.89
SMARCD1-211ENST00000551497 PEAK1Q9H792 1746 aa20.63■□□□□ 0.89
SMARCD1-211ENST00000551497 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
SMARCD1-211ENST00000551497 BLMP54132 1417 aaPredicted RBP20.61■□□□□ 0.89
SMARCD1-211ENST00000551497 CRB1P82279 1406 aa20.61■□□□□ 0.89
SMARCD1-211ENST00000551497 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
SMARCD1-211ENST00000551497 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
SMARCD1-211ENST00000551497 ABCC6O95255 1503 aa20.61■□□□□ 0.89
SMARCD1-211ENST00000551497 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
SMARCD1-211ENST00000551497 FLT4P35916 1363 aa20.6■□□□□ 0.89
SMARCD1-211ENST00000551497 RGS12O14924 1447 aa20.6■□□□□ 0.89
SMARCD1-211ENST00000551497 INSRP06213 1382 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 A0A0G2JS52 829 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 MTHFSP49914 203 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 MYT1Q01538 1121 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 BARGINQ6ZT62 677 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
SMARCD1-211ENST00000551497 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
SMARCD1-211ENST00000551497 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
SMARCD1-211ENST00000551497 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
SMARCD1-211ENST00000551497 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
SMARCD1-211ENST00000551497 RGPD2P0DJD1 1756 aa20.54■□□□□ 0.88
SMARCD1-211ENST00000551497 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
SMARCD1-211ENST00000551497 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
SMARCD1-211ENST00000551497 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
SMARCD1-211ENST00000551497 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
SMARCD1-211ENST00000551497 BRWD3Q6RI45 1802 aa20.51■□□□□ 0.87
SMARCD1-211ENST00000551497 EYA1Q99502 592 aa20.51■□□□□ 0.87
SMARCD1-211ENST00000551497 FAM182BQ5T319 152 aa20.5■□□□□ 0.87
SMARCD1-211ENST00000551497 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
SMARCD1-211ENST00000551497 IL2RBP14784 551 aa20.49■□□□□ 0.87
SMARCD1-211ENST00000551497 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
SMARCD1-211ENST00000551497 PARD3Q8TEW0 1356 aa20.48■□□□□ 0.87
SMARCD1-211ENST00000551497 IL13P35225 146 aa20.48■□□□□ 0.87
SMARCD1-211ENST00000551497 CDCA7Q9BWT1 371 aaPredicted RBP20.48■□□□□ 0.87
SMARCD1-211ENST00000551497 DISP2A7MBM2 1401 aa20.47■□□□□ 0.87
SMARCD1-211ENST00000551497 DDB1Q16531 1140 aa20.47■□□□□ 0.87
SMARCD1-211ENST00000551497 EXOC5O00471 708 aa20.46■□□□□ 0.87
SMARCD1-211ENST00000551497 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
SMARCD1-211ENST00000551497 RALBP1Q15311 655 aa20.46■□□□□ 0.87
SMARCD1-211ENST00000551497 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
SMARCD1-211ENST00000551497 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-211ENST00000551497 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMARCD1-211ENST00000551497 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
SMARCD1-211ENST00000551497 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
SMARCD1-211ENST00000551497 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
SMARCD1-211ENST00000551497 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
SMARCD1-211ENST00000551497 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
SMARCD1-211ENST00000551497 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
SMARCD1-211ENST00000551497 TATP17735 454 aaPredicted RBP20.41■□□□□ 0.86
SMARCD1-211ENST00000551497 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
SMARCD1-211ENST00000551497 MEGF6O75095 1541 aa20.41■□□□□ 0.86
SMARCD1-211ENST00000551497 PARP4Q9UKK3 1724 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-211ENST00000551497 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
SMARCD1-211ENST00000551497 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
SMARCD1-211ENST00000551497 COL3A1P02461 1466 aaPredicted RBP20.39■□□□□ 0.85
SMARCD1-211ENST00000551497 NCAPD2Q15021 1401 aa20.39■□□□□ 0.85
SMARCD1-211ENST00000551497 ZCRB1Q8TBF4 217 aaKnown RBP20.39■□□□□ 0.85
SMARCD1-211ENST00000551497 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
SMARCD1-211ENST00000551497 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
SMARCD1-211ENST00000551497 HMOX1P09601 288 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms