RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
SCAF11-215ENST00000551391 RTL5Q5HYW3 569 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-215ENST00000551391 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-215ENST00000551391 MAGEB6P1A0A0J9YX57 407 aa7.27□□□□□ -1.25
SCAF11-215ENST00000551391 VSIG8P0DPA2 414 aa7.27□□□□□ -1.25
SCAF11-215ENST00000551391 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
SCAF11-215ENST00000551391 FSHRP23945 695 aa7.26□□□□□ -1.25
SCAF11-215ENST00000551391 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
SCAF11-215ENST00000551391 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
SCAF11-215ENST00000551391 SOCS7O14512 581 aa7.25□□□□□ -1.25
SCAF11-215ENST00000551391 PPFIA3O75145 1194 aa7.25□□□□□ -1.25
SCAF11-215ENST00000551391 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
SCAF11-215ENST00000551391 MAP4K5Q9Y4K4 846 aa7.25□□□□□ -1.25
SCAF11-215ENST00000551391 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
SCAF11-215ENST00000551391 C1QTNF2Q9BXJ5 285 aa7.24□□□□□ -1.25
SCAF11-215ENST00000551391 CARD14Q9BXL6 1004 aa7.24□□□□□ -1.25
SCAF11-215ENST00000551391 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
SCAF11-215ENST00000551391 SH3RF1Q7Z6J0 888 aa7.23□□□□□ -1.25
SCAF11-215ENST00000551391 TRMT44Q8IYL2 757 aaKnown RBP7.23□□□□□ -1.25
SCAF11-215ENST00000551391 GPKOWQ92917 476 aaPredicted RBP eCLIP7.23□□□□□ -1.25
SCAF11-215ENST00000551391 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
SCAF11-215ENST00000551391 SOS2Q07890 1332 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-215ENST00000551391 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
SCAF11-215ENST00000551391 DNMT3LQ9UJW3 386 aa7.22□□□□□ -1.25
SCAF11-215ENST00000551391 TTLL8A6PVC2 850 aa7.21□□□□□ -1.26
SCAF11-215ENST00000551391 AP1G2O75843 785 aa7.21□□□□□ -1.26
SCAF11-215ENST00000551391 MCM6Q14566 821 aa7.21□□□□□ -1.26
SCAF11-215ENST00000551391 USP17L8P0C7I0 530 aa7.2□□□□□ -1.26
SCAF11-215ENST00000551391 CTDSPL2Q05D32 466 aa7.2□□□□□ -1.26
SCAF11-215ENST00000551391 FIGNL2A6NMB9 653 aa7.19□□□□□ -1.26
SCAF11-215ENST00000551391 ERFEQ4G0M1 354 aa7.19□□□□□ -1.26
SCAF11-215ENST00000551391 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
SCAF11-215ENST00000551391 ZBTB33Q86T24 672 aa7.19□□□□□ -1.26
SCAF11-215ENST00000551391 ARHGAP9Q9BRR9 750 aa7.19□□□□□ -1.26
SCAF11-215ENST00000551391 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
SCAF11-215ENST00000551391 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
SCAF11-215ENST00000551391 APBB1O00213 710 aa7.18□□□□□ -1.26
SCAF11-215ENST00000551391 DHX9Q08211 1270 aaKnown RBP7.18□□□□□ -1.26
SCAF11-215ENST00000551391 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
SCAF11-215ENST00000551391 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
SCAF11-215ENST00000551391 SLC10A4Q96EP9 437 aa7.18□□□□□ -1.26
SCAF11-215ENST00000551391 PTSQ03393 145 aa7.17□□□□□ -1.26
SCAF11-215ENST00000551391 MTMR14Q8NCE2 650 aa7.17□□□□□ -1.26
SCAF11-215ENST00000551391 CNTNAP3BQ96NU0 1288 aa7.17□□□□□ -1.26
SCAF11-215ENST00000551391 KCTD15Q96SI1 283 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-215ENST00000551391 CNTNAP3Q9BZ76 1288 aa7.17□□□□□ -1.26
SCAF11-215ENST00000551391 TIMELESSQ9UNS1 1208 aa7.17□□□□□ -1.26
SCAF11-215ENST00000551391 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
SCAF11-215ENST00000551391 CBLBQ13191 982 aa7.16□□□□□ -1.26
SCAF11-215ENST00000551391 Q6ZVU0 165 aa7.16□□□□□ -1.26
SCAF11-215ENST00000551391 FKBPLQ9UIM3 349 aa7.16□□□□□ -1.26
SCAF11-215ENST00000551391 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
SCAF11-215ENST00000551391 GJD4Q96KN9 370 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-215ENST00000551391 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
SCAF11-215ENST00000551391 A6NJR5 290 aa7.14□□□□□ -1.27
SCAF11-215ENST00000551391 RNF225M0QZC1 329 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-215ENST00000551391 SPINT1O43278 529 aa7.14□□□□□ -1.27
SCAF11-215ENST00000551391 UBTFP17480 764 aaKnown RBP7.14□□□□□ -1.27
SCAF11-215ENST00000551391 PTK2Q05397 1052 aa7.14□□□□□ -1.27
SCAF11-215ENST00000551391 CCDC155Q8N6L0 562 aa7.14□□□□□ -1.27
SCAF11-215ENST00000551391 COL25A1Q9BXS0 654 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-215ENST00000551391 PRM3Q9NNZ6 103 aa7.14□□□□□ -1.27
SCAF11-215ENST00000551391 ZC3H4Q9UPT8 1303 aaKnown RBP7.14□□□□□ -1.27
SCAF11-215ENST00000551391 TMEM151AQ8N4L1 468 aa7.13□□□□□ -1.27
SCAF11-215ENST00000551391 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
SCAF11-215ENST00000551391 PNMA1Q8ND90 353 aa7.13□□□□□ -1.27
SCAF11-215ENST00000551391 NANOS1Q8WY41 292 aaKnown RBP7.13□□□□□ -1.27
SCAF11-215ENST00000551391 TRIM34Q9BYJ4 488 aa7.13□□□□□ -1.27
SCAF11-215ENST00000551391 HMX1Q9NP08 348 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-215ENST00000551391 RELBQ01201 579 aa7.12□□□□□ -1.27
SCAF11-215ENST00000551391 NR6A1Q15406 480 aa7.12□□□□□ -1.27
SCAF11-215ENST00000551391 SV2AQ7L0J3 742 aa7.12□□□□□ -1.27
SCAF11-215ENST00000551391 KCTD17Q8N5Z5 321 aa7.12□□□□□ -1.27
SCAF11-215ENST00000551391 POLMQ9NP87 494 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-215ENST00000551391 COG6Q9Y2V7 657 aa7.12□□□□□ -1.27
SCAF11-215ENST00000551391 CDC14CA4D256 554 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 RAD21O60216 631 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 GDF11O95390 407 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 KRT76Q01546 638 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 AGBL1Q96MI9 1066 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 ADAMTS8Q9UP79 889 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 NDUFB9Q9Y6M9 179 aa7.11□□□□□ -1.27
SCAF11-215ENST00000551391 SLC35F4A4IF30 521 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 ITGA6P23229 1130 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 CTSOP43234 321 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-215ENST00000551391 NBPF20Q3BBV1 942 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
SCAF11-215ENST00000551391 VWA5B2Q8N398 1253 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 SVOPQ8N4V2 548 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 INSM2Q96T92 566 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-215ENST00000551391 GPSM3Q9Y4H4 160 aa7.1□□□□□ -1.27
SCAF11-215ENST00000551391 RAB15P59190 212 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 RASSF7Q02833 373 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 EPS8L1Q8TE68 723 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 TRIM52Q96A61 297 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 POM121Q96HA1 1249 aa7.09□□□□□ -1.27
SCAF11-215ENST00000551391 ZNF395Q9H8N7 513 aaPredicted RBP7.09□□□□□ -1.27
SCAF11-215ENST00000551391 GPR37L1O60883 481 aa7.08□□□□□ -1.28
SCAF11-215ENST00000551391 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms