RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 FCHSD2O94868 740 aa13.81□□□□□ -0.2
NEK3-203ENST00000551355 PHRF1Q9P1Y6 1649 aaKnown RBP13.8□□□□□ -0.2
NEK3-203ENST00000551355 NEFMP07197 916 aa13.8□□□□□ -0.2
NEK3-203ENST00000551355 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
NEK3-203ENST00000551355 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
NEK3-203ENST00000551355 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
NEK3-203ENST00000551355 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
NEK3-203ENST00000551355 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
NEK3-203ENST00000551355 JCADQ9P266 1359 aa13.79□□□□□ -0.2
NEK3-203ENST00000551355 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
NEK3-203ENST00000551355 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
NEK3-203ENST00000551355 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEK3-203ENST00000551355 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
NEK3-203ENST00000551355 RUNDC1Q96C34 613 aa13.78□□□□□ -0.2
NEK3-203ENST00000551355 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
NEK3-203ENST00000551355 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
NEK3-203ENST00000551355 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
NEK3-203ENST00000551355 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
NEK3-203ENST00000551355 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.21
NEK3-203ENST00000551355 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
NEK3-203ENST00000551355 SPATA31A6Q5VVP1 1343 aa13.75□□□□□ -0.21
NEK3-203ENST00000551355 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
NEK3-203ENST00000551355 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
NEK3-203ENST00000551355 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
NEK3-203ENST00000551355 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
NEK3-203ENST00000551355 ERBB3P21860 1342 aa13.74□□□□□ -0.21
NEK3-203ENST00000551355 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
NEK3-203ENST00000551355 CRYBG1Q9Y4K1 1723 aa13.74□□□□□ -0.21
NEK3-203ENST00000551355 EYA1Q99502 592 aa13.74□□□□□ -0.21
NEK3-203ENST00000551355 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
NEK3-203ENST00000551355 KDRP35968 1356 aa13.73□□□□□ -0.21
NEK3-203ENST00000551355 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
NEK3-203ENST00000551355 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
NEK3-203ENST00000551355 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
NEK3-203ENST00000551355 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
NEK3-203ENST00000551355 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
NEK3-203ENST00000551355 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 HSPA1LP34931 641 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 CCDC146Q8IYE0 955 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 LTN1O94822 1766 aa13.72□□□□□ -0.21
NEK3-203ENST00000551355 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
NEK3-203ENST00000551355 APAF1O14727 1248 aa13.71□□□□□ -0.21
NEK3-203ENST00000551355 HMOX1P09601 288 aa13.71□□□□□ -0.21
NEK3-203ENST00000551355 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.21
NEK3-203ENST00000551355 EVA1CP58658 441 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 PDE3BQ13370 1112 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
NEK3-203ENST00000551355 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
NEK3-203ENST00000551355 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
NEK3-203ENST00000551355 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
NEK3-203ENST00000551355 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
NEK3-203ENST00000551355 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
NEK3-203ENST00000551355 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
NEK3-203ENST00000551355 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
NEK3-203ENST00000551355 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
NEK3-203ENST00000551355 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
NEK3-203ENST00000551355 COL18A1P39060 1754 aa13.68□□□□□ -0.22
NEK3-203ENST00000551355 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
NEK3-203ENST00000551355 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 TMPOP42166 694 aaKnown RBP13.67□□□□□ -0.22
NEK3-203ENST00000551355 NFE2L2Q16236 605 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 BTG4Q9NY30 223 aa13.67□□□□□ -0.22
NEK3-203ENST00000551355 COL14A1Q05707 1796 aaKnown RBP13.67□□□□□ -0.22
NEK3-203ENST00000551355 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
NEK3-203ENST00000551355 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
NEK3-203ENST00000551355 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
NEK3-203ENST00000551355 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
NEK3-203ENST00000551355 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
NEK3-203ENST00000551355 RIPK4P57078 832 aa13.65□□□□□ -0.22
NEK3-203ENST00000551355 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
NEK3-203ENST00000551355 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
NEK3-203ENST00000551355 WDR63Q8IWG1 891 aa13.65□□□□□ -0.22
NEK3-203ENST00000551355 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
NEK3-203ENST00000551355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.226e-7■■■■□ 25.9
NEK3-203ENST00000551355 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
NEK3-203ENST00000551355 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
NEK3-203ENST00000551355 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
NEK3-203ENST00000551355 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
NEK3-203ENST00000551355 CRB1P82279 1406 aa13.64□□□□□ -0.23
NEK3-203ENST00000551355 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
NEK3-203ENST00000551355 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
NEK3-203ENST00000551355 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
NEK3-203ENST00000551355 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
NEK3-203ENST00000551355 USHBP1Q8N6Y0 703 aa13.63□□□□□ -0.23
NEK3-203ENST00000551355 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
NEK3-203ENST00000551355 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
NEK3-203ENST00000551355 MEX3CQ5U5Q3 659 aaKnown RBP13.62□□□□□ -0.23
NEK3-203ENST00000551355 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
NEK3-203ENST00000551355 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
NEK3-203ENST00000551355 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
NEK3-203ENST00000551355 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms