RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 GLI3P10071 1580 aa13.04□□□□□ -0.32
PFDN5-215ENST00000551223 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
PFDN5-215ENST00000551223 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
PFDN5-215ENST00000551223 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
PFDN5-215ENST00000551223 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
PFDN5-215ENST00000551223 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
PFDN5-215ENST00000551223 RGS12O14924 1447 aa13.03□□□□□ -0.32
PFDN5-215ENST00000551223 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-215ENST00000551223 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-215ENST00000551223 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-215ENST00000551223 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
PFDN5-215ENST00000551223 LTN1O94822 1766 aa13.02□□□□□ -0.33
PFDN5-215ENST00000551223 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
PFDN5-215ENST00000551223 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-215ENST00000551223 IP6K1Q92551 441 aa13.01□□□□□ -0.33
PFDN5-215ENST00000551223 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
PFDN5-215ENST00000551223 ABCC6O95255 1503 aa13□□□□□ -0.33
PFDN5-215ENST00000551223 WDR17Q8IZU2 1322 aa13□□□□□ -0.33
PFDN5-215ENST00000551223 AMPHP49418 695 aa13□□□□□ -0.33
PFDN5-215ENST00000551223 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
PFDN5-215ENST00000551223 USP35Q9P2H5 1018 aa13□□□□□ -0.33
PFDN5-215ENST00000551223 CRB1P82279 1406 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 NSD2O96028 1365 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 SOCS7O14512 581 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 HOXC9P31274 260 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
PFDN5-215ENST00000551223 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-215ENST00000551223 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
PFDN5-215ENST00000551223 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
PFDN5-215ENST00000551223 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
PFDN5-215ENST00000551223 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-215ENST00000551223 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
PFDN5-215ENST00000551223 ERBB3P21860 1342 aa12.97□□□□□ -0.33
PFDN5-215ENST00000551223 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
PFDN5-215ENST00000551223 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
PFDN5-215ENST00000551223 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
PFDN5-215ENST00000551223 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
PFDN5-215ENST00000551223 A0A0G2JS52 829 aa12.96□□□□□ -0.33
PFDN5-215ENST00000551223 MYT1Q01538 1121 aa12.96□□□□□ -0.33
PFDN5-215ENST00000551223 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
PFDN5-215ENST00000551223 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-215ENST00000551223 POLKQ9UBT6 870 aa12.96□□□□□ -0.33
PFDN5-215ENST00000551223 THRAP3Q9Y2W1 955 aaKnown RBP12.96□□□□□ -0.33
PFDN5-215ENST00000551223 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
PFDN5-215ENST00000551223 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
PFDN5-215ENST00000551223 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-215ENST00000551223 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
PFDN5-215ENST00000551223 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
PFDN5-215ENST00000551223 PEAK1Q9H792 1746 aa12.95□□□□□ -0.34
PFDN5-215ENST00000551223 FLT4P35916 1363 aa12.94□□□□□ -0.34
PFDN5-215ENST00000551223 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PFDN5-215ENST00000551223 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
PFDN5-215ENST00000551223 INSRP06213 1382 aa12.94□□□□□ -0.34
PFDN5-215ENST00000551223 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
PFDN5-215ENST00000551223 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-215ENST00000551223 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
PFDN5-215ENST00000551223 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
PFDN5-215ENST00000551223 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-215ENST00000551223 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
PFDN5-215ENST00000551223 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
PFDN5-215ENST00000551223 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
PFDN5-215ENST00000551223 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
PFDN5-215ENST00000551223 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
PFDN5-215ENST00000551223 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
PFDN5-215ENST00000551223 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
PFDN5-215ENST00000551223 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
PFDN5-215ENST00000551223 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
PFDN5-215ENST00000551223 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
PFDN5-215ENST00000551223 IL2RBP14784 551 aa12.88□□□□□ -0.35
PFDN5-215ENST00000551223 MTHFSP49914 203 aa12.88□□□□□ -0.35
PFDN5-215ENST00000551223 DDB1Q16531 1140 aa12.88□□□□□ -0.35
PFDN5-215ENST00000551223 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
PFDN5-215ENST00000551223 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-215ENST00000551223 EXOC5O00471 708 aa12.87□□□□□ -0.35
PFDN5-215ENST00000551223 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
PFDN5-215ENST00000551223 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
PFDN5-215ENST00000551223 EYA1Q99502 592 aa12.86□□□□□ -0.35
PFDN5-215ENST00000551223 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
PFDN5-215ENST00000551223 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-215ENST00000551223 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
PFDN5-215ENST00000551223 NCAPD2Q15021 1401 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 IL13P35225 146 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 MEGF6O75095 1541 aa12.83□□□□□ -0.36
PFDN5-215ENST00000551223 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-215ENST00000551223 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
PFDN5-215ENST00000551223 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
PFDN5-215ENST00000551223 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
PFDN5-215ENST00000551223 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
PFDN5-215ENST00000551223 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
PFDN5-215ENST00000551223 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
PFDN5-215ENST00000551223 TRIM37O94972 964 aa12.8□□□□□ -0.36
PFDN5-215ENST00000551223 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
PFDN5-215ENST00000551223 EP400Q96L91 3159 aa12.8□□□□□ -0.36
PFDN5-215ENST00000551223 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
PFDN5-215ENST00000551223 BCL9O00512 1426 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms