RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
PFDN5-213ENST00000550964 ZBTB7CA1YPR0 619 aa13.72□□□□□ -0.21
PFDN5-213ENST00000550964 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
PFDN5-213ENST00000550964 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
PFDN5-213ENST00000550964 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
PFDN5-213ENST00000550964 RGPD5Q99666 1765 aa13.72□□□□□ -0.21
PFDN5-213ENST00000550964 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
PFDN5-213ENST00000550964 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
PFDN5-213ENST00000550964 MAP2P11137 1827 aaKnown RBP13.71□□□□□ -0.21
PFDN5-213ENST00000550964 AMPHP49418 695 aa13.71□□□□□ -0.21
PFDN5-213ENST00000550964 CAMTA1Q9Y6Y1 1673 aa13.71□□□□□ -0.21
PFDN5-213ENST00000550964 CRB1P82279 1406 aa13.71□□□□□ -0.22
PFDN5-213ENST00000550964 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 COL5A2P05997 1499 aaPredicted RBP13.7□□□□□ -0.22
PFDN5-213ENST00000550964 SOX12O15370 315 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 CSB-PGBD3P0DP91 1061 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 BARGINQ6ZT62 677 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 IP6K1Q92551 441 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 CARD14Q9BXL6 1004 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
PFDN5-213ENST00000550964 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
PFDN5-213ENST00000550964 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
PFDN5-213ENST00000550964 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
PFDN5-213ENST00000550964 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
PFDN5-213ENST00000550964 GLI3P10071 1580 aa13.69□□□□□ -0.22
PFDN5-213ENST00000550964 A0A0G2JS52 829 aa13.68□□□□□ -0.22
PFDN5-213ENST00000550964 MYT1Q01538 1121 aa13.68□□□□□ -0.22
PFDN5-213ENST00000550964 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
PFDN5-213ENST00000550964 RGS12O14924 1447 aa13.67□□□□□ -0.22
PFDN5-213ENST00000550964 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
PFDN5-213ENST00000550964 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
PFDN5-213ENST00000550964 FLT4P35916 1363 aa13.67□□□□□ -0.22
PFDN5-213ENST00000550964 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
PFDN5-213ENST00000550964 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
PFDN5-213ENST00000550964 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
PFDN5-213ENST00000550964 ERBB3P21860 1342 aa13.65□□□□□ -0.22
PFDN5-213ENST00000550964 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
PFDN5-213ENST00000550964 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
PFDN5-213ENST00000550964 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
PFDN5-213ENST00000550964 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 PARP4Q9UKK3 1724 aaKnown RBP13.64□□□□□ -0.23
PFDN5-213ENST00000550964 HOXC9P31274 260 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
PFDN5-213ENST00000550964 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
PFDN5-213ENST00000550964 INSRP06213 1382 aa13.63□□□□□ -0.23
PFDN5-213ENST00000550964 NLRP2Q9NX02 1062 aa13.63□□□□□ -0.23
PFDN5-213ENST00000550964 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
PFDN5-213ENST00000550964 PER1O15534 1290 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-213ENST00000550964 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
PFDN5-213ENST00000550964 DDB1Q16531 1140 aa13.61□□□□□ -0.23
PFDN5-213ENST00000550964 EXOC5O00471 708 aa13.6□□□□□ -0.23
PFDN5-213ENST00000550964 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
PFDN5-213ENST00000550964 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
PFDN5-213ENST00000550964 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
PFDN5-213ENST00000550964 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
PFDN5-213ENST00000550964 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
PFDN5-213ENST00000550964 IL2RBP14784 551 aa13.59□□□□□ -0.23
PFDN5-213ENST00000550964 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
PFDN5-213ENST00000550964 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
PFDN5-213ENST00000550964 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
PFDN5-213ENST00000550964 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
PFDN5-213ENST00000550964 LTV1Q96GA3 475 aaPredicted RBP13.56□□□□□ -0.24
PFDN5-213ENST00000550964 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
PFDN5-213ENST00000550964 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
PFDN5-213ENST00000550964 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
PFDN5-213ENST00000550964 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 EP400Q96L91 3159 aa13.55□□□□□ -0.24
PFDN5-213ENST00000550964 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
PFDN5-213ENST00000550964 TATP17735 454 aaPredicted RBP13.54□□□□□ -0.24
PFDN5-213ENST00000550964 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
PFDN5-213ENST00000550964 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
PFDN5-213ENST00000550964 BCL9O00512 1426 aa13.53□□□□□ -0.24
PFDN5-213ENST00000550964 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
PFDN5-213ENST00000550964 FBLN1P23142 703 aa13.52□□□□□ -0.25
PFDN5-213ENST00000550964 BAG6P46379 1132 aa13.52□□□□□ -0.25
PFDN5-213ENST00000550964 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
PFDN5-213ENST00000550964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
PFDN5-213ENST00000550964 SBF2Q86WG5 1849 aa13.51□□□□□ -0.25
PFDN5-213ENST00000550964 RALBP1Q15311 655 aa13.51□□□□□ -0.25
PFDN5-213ENST00000550964 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
PFDN5-213ENST00000550964 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
PFDN5-213ENST00000550964 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
PFDN5-213ENST00000550964 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
PFDN5-213ENST00000550964 MTHFSP49914 203 aa13.5□□□□□ -0.25
PFDN5-213ENST00000550964 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
PFDN5-213ENST00000550964 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
PFDN5-213ENST00000550964 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
PFDN5-213ENST00000550964 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
PFDN5-213ENST00000550964 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-213ENST00000550964 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms