RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
TROAP-213ENST00000550709 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
TROAP-213ENST00000550709 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
TROAP-213ENST00000550709 PLCH1Q4KWH8 1693 aa18.86■□□□□ 0.61
TROAP-213ENST00000550709 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
TROAP-213ENST00000550709 AMPHP49418 695 aa18.86■□□□□ 0.61
TROAP-213ENST00000550709 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
TROAP-213ENST00000550709 SPATA31A1Q5TZJ5 1347 aa18.85■□□□□ 0.61
TROAP-213ENST00000550709 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
TROAP-213ENST00000550709 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
TROAP-213ENST00000550709 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
TROAP-213ENST00000550709 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
TROAP-213ENST00000550709 CNGB1Q14028 1251 aaPredicted RBP18.83■□□□□ 0.6
TROAP-213ENST00000550709 IP6K1Q92551 441 aa18.83■□□□□ 0.6
TROAP-213ENST00000550709 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
TROAP-213ENST00000550709 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
TROAP-213ENST00000550709 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
TROAP-213ENST00000550709 GLI3P10071 1580 aa18.81■□□□□ 0.6
TROAP-213ENST00000550709 WDR17Q8IZU2 1322 aa18.81■□□□□ 0.6
TROAP-213ENST00000550709 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
TROAP-213ENST00000550709 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
TROAP-213ENST00000550709 ANKRD24Q8TF21 1146 aa18.81■□□□□ 0.6
TROAP-213ENST00000550709 HOXC9P31274 260 aa18.8■□□□□ 0.6
TROAP-213ENST00000550709 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
TROAP-213ENST00000550709 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
TROAP-213ENST00000550709 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
TROAP-213ENST00000550709 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
TROAP-213ENST00000550709 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.8■□□□□ 0.6
TROAP-213ENST00000550709 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
TROAP-213ENST00000550709 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
TROAP-213ENST00000550709 CRB1P82279 1406 aa18.78■□□□□ 0.6
TROAP-213ENST00000550709 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
TROAP-213ENST00000550709 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
TROAP-213ENST00000550709 ERBB3P21860 1342 aa18.77■□□□□ 0.6
TROAP-213ENST00000550709 USP54Q70EL1 1684 aa18.77■□□□□ 0.6
TROAP-213ENST00000550709 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
TROAP-213ENST00000550709 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
TROAP-213ENST00000550709 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
TROAP-213ENST00000550709 CARD10Q9BWT7 1032 aa18.76■□□□□ 0.59
TROAP-213ENST00000550709 THRAP3Q9Y2W1 955 aaKnown RBP18.76■□□□□ 0.59
TROAP-213ENST00000550709 NSD2O96028 1365 aa18.76■□□□□ 0.59
TROAP-213ENST00000550709 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
TROAP-213ENST00000550709 COL18A1P39060 1754 aa18.75■□□□□ 0.59
TROAP-213ENST00000550709 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
TROAP-213ENST00000550709 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
TROAP-213ENST00000550709 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
TROAP-213ENST00000550709 FLT4P35916 1363 aa18.72■□□□□ 0.59
TROAP-213ENST00000550709 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
TROAP-213ENST00000550709 ABCC6O95255 1503 aa18.71■□□□□ 0.59
TROAP-213ENST00000550709 PDE3BQ13370 1112 aa18.71■□□□□ 0.59
TROAP-213ENST00000550709 UPF1Q92900 1129 aaKnown RBP eCLIP18.71■□□□□ 0.59
TROAP-213ENST00000550709 INSRP06213 1382 aa18.69■□□□□ 0.58
TROAP-213ENST00000550709 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
TROAP-213ENST00000550709 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
TROAP-213ENST00000550709 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
TROAP-213ENST00000550709 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
TROAP-213ENST00000550709 DDB1Q16531 1140 aa18.68■□□□□ 0.58
TROAP-213ENST00000550709 CDCA7Q9BWT1 371 aaPredicted RBP18.68■□□□□ 0.58
TROAP-213ENST00000550709 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
TROAP-213ENST00000550709 SMG6Q86US8 1419 aaKnown RBP18.67■□□□□ 0.58
TROAP-213ENST00000550709 LTN1O94822 1766 aa18.67■□□□□ 0.58
TROAP-213ENST00000550709 IL2RBP14784 551 aa18.66■□□□□ 0.58
TROAP-213ENST00000550709 EXOC5O00471 708 aa18.65■□□□□ 0.58
TROAP-213ENST00000550709 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
TROAP-213ENST00000550709 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
TROAP-213ENST00000550709 MTHFSP49914 203 aa18.64■□□□□ 0.57
TROAP-213ENST00000550709 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
TROAP-213ENST00000550709 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
TROAP-213ENST00000550709 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
TROAP-213ENST00000550709 FAM196AQ6ZSG2 479 aa18.62■□□□□ 0.57
TROAP-213ENST00000550709 EYA1Q99502 592 aa18.62■□□□□ 0.57
TROAP-213ENST00000550709 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
TROAP-213ENST00000550709 EP400Q96L91 3159 aa18.61■□□□□ 0.57
TROAP-213ENST00000550709 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
TROAP-213ENST00000550709 RAPGEF4Q8WZA2 1011 aa18.61■□□□□ 0.57
TROAP-213ENST00000550709 TRIM37O94972 964 aa18.59■□□□□ 0.57
TROAP-213ENST00000550709 SF3B2Q13435 895 aaKnown RBP18.59■□□□□ 0.57
TROAP-213ENST00000550709 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
TROAP-213ENST00000550709 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
TROAP-213ENST00000550709 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.56
TROAP-213ENST00000550709 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
TROAP-213ENST00000550709 CCDC125Q86Z20 511 aa18.57■□□□□ 0.56
TROAP-213ENST00000550709 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
TROAP-213ENST00000550709 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
TROAP-213ENST00000550709 MEGF6O75095 1541 aa18.55■□□□□ 0.56
TROAP-213ENST00000550709 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
TROAP-213ENST00000550709 IL13P35225 146 aa18.55■□□□□ 0.56
TROAP-213ENST00000550709 DEFB132Q7Z7B7 95 aa18.55■□□□□ 0.56
TROAP-213ENST00000550709 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
TROAP-213ENST00000550709 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
TROAP-213ENST00000550709 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
TROAP-213ENST00000550709 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
TROAP-213ENST00000550709 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
TROAP-213ENST00000550709 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.56
TROAP-213ENST00000550709 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
TROAP-213ENST00000550709 LRRC37A3O60309 1634 aa18.52■□□□□ 0.55
TROAP-213ENST00000550709 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.55
TROAP-213ENST00000550709 APBA3O96018 575 aa18.51■□□□□ 0.55
TROAP-213ENST00000550709 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
TROAP-213ENST00000550709 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms