RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
PRDM4-206ENST00000550659 MMP16P51512 607 aa9.32□□□□□ -0.92
PRDM4-206ENST00000550659 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRDM4-206ENST00000550659 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
PRDM4-206ENST00000550659 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
PRDM4-206ENST00000550659 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
PRDM4-206ENST00000550659 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
PRDM4-206ENST00000550659 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
PRDM4-206ENST00000550659 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
PRDM4-206ENST00000550659 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
PRDM4-206ENST00000550659 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
PRDM4-206ENST00000550659 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
PRDM4-206ENST00000550659 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
PRDM4-206ENST00000550659 LHX8Q68G74 356 aa9.3□□□□□ -0.92
PRDM4-206ENST00000550659 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
PRDM4-206ENST00000550659 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
PRDM4-206ENST00000550659 WNT2BQ93097 391 aa9.3□□□□□ -0.92
PRDM4-206ENST00000550659 WDR97A6NE52 1622 aa9.3□□□□□ -0.92
PRDM4-206ENST00000550659 ZNF608Q9ULD9 1512 aaPredicted RBP9.3□□□□□ -0.92
PRDM4-206ENST00000550659 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
PRDM4-206ENST00000550659 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
PRDM4-206ENST00000550659 SPSB2Q99619 263 aa9.29□□□□□ -0.92
PRDM4-206ENST00000550659 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
PRDM4-206ENST00000550659 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
PRDM4-206ENST00000550659 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L21D6R901 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 FOXD4L5Q5VV16 416 aaPredicted RBP9.28□□□□□ -0.92
PRDM4-206ENST00000550659 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 FOXD4L4Q8WXT5 416 aaPredicted RBP9.28□□□□□ -0.92
PRDM4-206ENST00000550659 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 SOGA1O94964 1423 aa9.28□□□□□ -0.92
PRDM4-206ENST00000550659 NCOA4Q13772 614 aa9.27□□□□□ -0.93
PRDM4-206ENST00000550659 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
PRDM4-206ENST00000550659 PLPP7Q8NBV4 271 aa9.27□□□□□ -0.93
PRDM4-206ENST00000550659 PTK7Q13308 1070 aa9.26□□□□□ -0.93
PRDM4-206ENST00000550659 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
PRDM4-206ENST00000550659 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
PRDM4-206ENST00000550659 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
PRDM4-206ENST00000550659 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
PRDM4-206ENST00000550659 RASA1P20936 1047 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 ADAM32Q8TC27 787 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 CCER1Q8TC90 406 aaPredicted RBP9.25□□□□□ -0.93
PRDM4-206ENST00000550659 IFT140Q96RY7 1462 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 ABCA10Q8WWZ4 1543 aa9.25□□□□□ -0.93
PRDM4-206ENST00000550659 AQRO60306 1485 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRDM4-206ENST00000550659 ARHGAP9Q9BRR9 750 aa9.24□□□□□ -0.93
PRDM4-206ENST00000550659 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
PRDM4-206ENST00000550659 PRDM9Q9NQV7 894 aa9.24□□□□□ -0.93
PRDM4-206ENST00000550659 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
PRDM4-206ENST00000550659 SSFA2P28290 1259 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 COPS2P61201 443 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 EML3Q32P44 896 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 PHLDB3Q6NSJ2 640 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 CLP1Q92989 425 aaKnown RBP9.23□□□□□ -0.93
PRDM4-206ENST00000550659 FAM163AQ96GL9 167 aaPredicted RBP9.23□□□□□ -0.93
PRDM4-206ENST00000550659 EIF4G3O43432 1585 aaKnown RBP9.23□□□□□ -0.93
PRDM4-206ENST00000550659 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
PRDM4-206ENST00000550659 ADH1BP00325 375 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 ZBTB33Q86T24 672 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 ANKMY2Q8IV38 441 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
PRDM4-206ENST00000550659 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
PRDM4-206ENST00000550659 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
PRDM4-206ENST00000550659 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
PRDM4-206ENST00000550659 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
PRDM4-206ENST00000550659 ZPR1O75312 459 aa9.2□□□□□ -0.94
PRDM4-206ENST00000550659 SWI5Q1ZZU3 235 aa9.2□□□□□ -0.94
PRDM4-206ENST00000550659 THSD4Q6ZMP0 1018 aa9.2□□□□□ -0.94
PRDM4-206ENST00000550659 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
PRDM4-206ENST00000550659 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
PRDM4-206ENST00000550659 ATP1A2P50993 1020 aa9.19□□□□□ -0.94
PRDM4-206ENST00000550659 SH3RF1Q7Z6J0 888 aa9.19□□□□□ -0.94
PRDM4-206ENST00000550659 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
PRDM4-206ENST00000550659 TLL1O43897 1013 aa9.18□□□□□ -0.94
PRDM4-206ENST00000550659 CLDN10P78369 228 aa9.18□□□□□ -0.94
PRDM4-206ENST00000550659 GAPVD1Q14C86 1478 aa9.18□□□□□ -0.94
PRDM4-206ENST00000550659 PTCRAQ6ISU1 281 aaPredicted RBP9.18□□□□□ -0.94
PRDM4-206ENST00000550659 PBRM1Q86U86 1689 aa9.18□□□□□ -0.94
PRDM4-206ENST00000550659 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
PRDM4-206ENST00000550659 NOD1Q9Y239 953 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms