RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 NR6A1Q15406 480 aa6.91□□□□□ -1.3
CCNT1-203ENST00000550457 SKIV2LQ15477 1246 aaKnown RBP6.91□□□□□ -1.3
CCNT1-203ENST00000550457 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-203ENST00000550457 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
CCNT1-203ENST00000550457 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
CCNT1-203ENST00000550457 EMILIN1Q9Y6C2 1016 aa6.91□□□□□ -1.3
CCNT1-203ENST00000550457 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
CCNT1-203ENST00000550457 PDXDC2PQ6P474 469 aa6.9□□□□□ -1.3
CCNT1-203ENST00000550457 TSEN34Q9BSV6 310 aaKnown RBP6.9□□□□□ -1.3
CCNT1-203ENST00000550457 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCNT1-203ENST00000550457 KDM4CQ9H3R0 1056 aa6.9□□□□□ -1.3
CCNT1-203ENST00000550457 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
CCNT1-203ENST00000550457 FAM181BA6NEQ2 426 aa6.89□□□□□ -1.31
CCNT1-203ENST00000550457 ARHGAP9Q9BRR9 750 aa6.89□□□□□ -1.31
CCNT1-203ENST00000550457 PPP2R2DQ66LE6 453 aa6.88□□□□□ -1.31
CCNT1-203ENST00000550457 Q6ZVU0 165 aa6.88□□□□□ -1.31
CCNT1-203ENST00000550457 KCTD15Q96SI1 283 aaPredicted RBP6.88□□□□□ -1.31
CCNT1-203ENST00000550457 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
CCNT1-203ENST00000550457 GPR161Q8N6U8 529 aaKnown RBP6.87□□□□□ -1.31
CCNT1-203ENST00000550457 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
CCNT1-203ENST00000550457 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 SPINT1O43278 529 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 AP1G2O75843 785 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 KRT76Q01546 638 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
CCNT1-203ENST00000550457 SLC10A4Q96EP9 437 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-203ENST00000550457 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CCNT1-203ENST00000550457 ZC3H4Q9UPT8 1303 aaKnown RBP6.85□□□□□ -1.31
CCNT1-203ENST00000550457 PTSQ03393 145 aa6.85□□□□□ -1.31
CCNT1-203ENST00000550457 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.85□□□□□ -1.31
CCNT1-203ENST00000550457 ZBTB33Q86T24 672 aa6.85□□□□□ -1.31
CCNT1-203ENST00000550457 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
CCNT1-203ENST00000550457 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
CCNT1-203ENST00000550457 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
CCNT1-203ENST00000550457 CTSOP43234 321 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-203ENST00000550457 PTK2Q05397 1052 aa6.83□□□□□ -1.32
CCNT1-203ENST00000550457 CDV3Q9UKY7 258 aaKnown RBP6.83□□□□□ -1.32
CCNT1-203ENST00000550457 GPSM3Q9Y4H4 160 aa6.83□□□□□ -1.32
CCNT1-203ENST00000550457 USP17L8P0C7I0 530 aa6.82□□□□□ -1.32
CCNT1-203ENST00000550457 DHX9Q08211 1270 aaKnown RBP6.82□□□□□ -1.32
CCNT1-203ENST00000550457 CCDC155Q8N6L0 562 aa6.82□□□□□ -1.32
CCNT1-203ENST00000550457 TMPRSS4Q9NRS4 437 aa6.82□□□□□ -1.32
CCNT1-203ENST00000550457 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
CCNT1-203ENST00000550457 RELBQ01201 579 aa6.81□□□□□ -1.32
CCNT1-203ENST00000550457 INSM2Q96T92 566 aaPredicted RBP6.81□□□□□ -1.32
CCNT1-203ENST00000550457 SLC35F4A4IF30 521 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 LILRA1O75019 489 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 ADD1P35611 737 aaKnown RBP6.8□□□□□ -1.32
CCNT1-203ENST00000550457 RFC5P40937 340 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 RNFT1Q5M7Z0 435 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
CCNT1-203ENST00000550457 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
CCNT1-203ENST00000550457 CNTNAP3BQ96NU0 1288 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 CNTNAP3Q9BZ76 1288 aa6.8□□□□□ -1.32
CCNT1-203ENST00000550457 ZNF395Q9H8N7 513 aaPredicted RBP6.8□□□□□ -1.32
CCNT1-203ENST00000550457 GSK3AP49840 483 aa6.79□□□□□ -1.32
CCNT1-203ENST00000550457 RAB15P59190 212 aa6.79□□□□□ -1.32
CCNT1-203ENST00000550457 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
CCNT1-203ENST00000550457 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
CCNT1-203ENST00000550457 ESPNB1AK53 854 aa6.78□□□□□ -1.32
CCNT1-203ENST00000550457 ERVH48-1M5A8F1 160 aa6.78□□□□□ -1.32
CCNT1-203ENST00000550457 NBPF20Q3BBV1 942 aa6.78□□□□□ -1.32
CCNT1-203ENST00000550457 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
CCNT1-203ENST00000550457 COL25A1Q9BXS0 654 aaPredicted RBP6.78□□□□□ -1.32
CCNT1-203ENST00000550457 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
CCNT1-203ENST00000550457 ADH1AP07327 375 aa6.77□□□□□ -1.33
CCNT1-203ENST00000550457 ITGA6P23229 1130 aa6.77□□□□□ -1.33
CCNT1-203ENST00000550457 DZIP3Q86Y13 1208 aaKnown RBP6.77□□□□□ -1.33
CCNT1-203ENST00000550457 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
CCNT1-203ENST00000550457 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
CCNT1-203ENST00000550457 FOXD4L5Q5VV16 416 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-203ENST00000550457 PTGIRP43119 386 aa6.75□□□□□ -1.33
CCNT1-203ENST00000550457 CDC14CA4D256 554 aa6.74□□□□□ -1.33
CCNT1-203ENST00000550457 KCNMA1Q12791 1236 aa6.74□□□□□ -1.33
CCNT1-203ENST00000550457 ZNF385CQ66K41 422 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-203ENST00000550457 PNMA1Q8ND90 353 aa6.74□□□□□ -1.33
CCNT1-203ENST00000550457 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
CCNT1-203ENST00000550457 CYLDQ9NQC7 956 aa6.74□□□□□ -1.33
CCNT1-203ENST00000550457 BCANQ96GW7 911 aa6.73□□□□□ -1.33
CCNT1-203ENST00000550457 GJD4Q96KN9 370 aaPredicted RBP6.73□□□□□ -1.33
CCNT1-203ENST00000550457 CUEDC1Q9NWM3 386 aaPredicted RBP6.73□□□□□ -1.33
CCNT1-203ENST00000550457 ADAMTS8Q9UP79 889 aa6.73□□□□□ -1.33
CCNT1-203ENST00000550457 GIGYF1O75420 1035 aaPredicted RBP6.72□□□□□ -1.33
CCNT1-203ENST00000550457 SLURP2P0DP57 97 aa6.72□□□□□ -1.33
CCNT1-203ENST00000550457 SUZ12Q15022 739 aaKnown RBP6.72□□□□□ -1.33
CCNT1-203ENST00000550457 SV2AQ7L0J3 742 aa6.72□□□□□ -1.33
CCNT1-203ENST00000550457 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
CCNT1-203ENST00000550457 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
CCNT1-203ENST00000550457 FBXO45P0C2W1 286 aa6.71□□□□□ -1.34
CCNT1-203ENST00000550457 TMEM259Q4ZIN3 620 aa6.71□□□□□ -1.34
CCNT1-203ENST00000550457 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
CCNT1-203ENST00000550457 KCTD17Q8N5Z5 321 aa6.71□□□□□ -1.34
CCNT1-203ENST00000550457 ZBBXA8MT70 800 aa6.7□□□□□ -1.34
CCNT1-203ENST00000550457 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
CCNT1-203ENST00000550457 LYSMD3Q7Z3D4 306 aa6.7□□□□□ -1.34
CCNT1-203ENST00000550457 PCDHB9Q9Y5E1 797 aa6.7□□□□□ -1.34
CCNT1-203ENST00000550457 RHOQP17081 205 aa6.69□□□□□ -1.34
CCNT1-203ENST00000550457 RNF144AP50876 292 aaPredicted RBP6.69□□□□□ -1.34
CCNT1-203ENST00000550457 RASSF7Q02833 373 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms