RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 SIX5Q8N196 739 aa7.83□□□□□ -1.16
TMCC3-202ENST00000548918 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
TMCC3-202ENST00000548918 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
TMCC3-202ENST00000548918 RABGEF1Q9UJ41 708 aa7.83□□□□□ -1.16
TMCC3-202ENST00000548918 DNMT3AQ9Y6K1 912 aaPredicted RBP7.83□□□□□ -1.16
TMCC3-202ENST00000548918 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
TMCC3-202ENST00000548918 EML3Q32P44 896 aa7.82□□□□□ -1.16
TMCC3-202ENST00000548918 POTEHQ6S545 545 aa7.82□□□□□ -1.16
TMCC3-202ENST00000548918 GTF3C2Q8WUA4 911 aaPredicted RBP7.82□□□□□ -1.16
TMCC3-202ENST00000548918 PURBQ96QR8 312 aaKnown RBP7.82□□□□□ -1.16
TMCC3-202ENST00000548918 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 C21orf2O43822 256 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 HDLBPQ00341 1268 aaKnown RBP7.81□□□□□ -1.16
TMCC3-202ENST00000548918 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
TMCC3-202ENST00000548918 Q3C1V9 767 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 POTEEQ6S8J3 1075 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 USB1Q9BQ65 265 aaKnown RBP7.81□□□□□ -1.16
TMCC3-202ENST00000548918 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
TMCC3-202ENST00000548918 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
TMCC3-202ENST00000548918 ACTN4O43707 911 aaKnown RBP7.8□□□□□ -1.16
TMCC3-202ENST00000548918 MRPL58Q14197 206 aaKnown RBP7.8□□□□□ -1.16
TMCC3-202ENST00000548918 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 C9orf131Q5VYM1 1079 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 UBXN4Q92575 508 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 BACH2Q9BYV9 841 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 CADPSQ9ULU8 1353 aa7.8□□□□□ -1.16
TMCC3-202ENST00000548918 RNF40O75150 1001 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 PTPRNQ16849 979 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 TRIM50Q86XT4 487 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 GAS2L2Q8NHY3 880 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 ADAM32Q8TC27 787 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 MKNK1Q9BUB5 465 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 GPSM3Q9Y4H4 160 aa7.79□□□□□ -1.16
TMCC3-202ENST00000548918 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
TMCC3-202ENST00000548918 JUNDP17535 347 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 ERCC5P28715 1186 aaPredicted RBP7.78□□□□□ -1.16
TMCC3-202ENST00000548918 SEC13P55735 322 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 RAD51AP2Q09MP3 1159 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 KMT5BQ4FZB7 885 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 THAP11Q96EK4 314 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
TMCC3-202ENST00000548918 CTHP32929 405 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 ATP1A2P50993 1020 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
TMCC3-202ENST00000548918 GTF2IP78347 998 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 PTK2Q05397 1052 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 FKBP5Q13451 457 aaPredicted RBP7.77□□□□□ -1.17
TMCC3-202ENST00000548918 TPCN2Q8NHX9 752 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 PCDHGA11Q9Y5H2 935 aa7.77□□□□□ -1.17
TMCC3-202ENST00000548918 FKBP4Q02790 459 aaKnown RBP eCLIP7.76□□□□□ -1.17
TMCC3-202ENST00000548918 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
TMCC3-202ENST00000548918 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
TMCC3-202ENST00000548918 GIMAP6Q6P9H5 292 aa7.76□□□□□ -1.17
TMCC3-202ENST00000548918 RGL4Q8IZJ4 473 aa7.76□□□□□ -1.17
TMCC3-202ENST00000548918 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
TMCC3-202ENST00000548918 PPM1GO15355 546 aaPredicted RBP7.75□□□□□ -1.17
TMCC3-202ENST00000548918 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
TMCC3-202ENST00000548918 EAPPQ56P03 285 aaPredicted RBP7.75□□□□□ -1.17
TMCC3-202ENST00000548918 OXLD1Q5BKU9 147 aa7.75□□□□□ -1.17
TMCC3-202ENST00000548918 SLC4A5Q9BY07 1137 aa7.75□□□□□ -1.17
TMCC3-202ENST00000548918 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
TMCC3-202ENST00000548918 FMNL1O95466 1100 aaPredicted RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 WEE1P30291 646 aa7.74□□□□□ -1.17
TMCC3-202ENST00000548918 SLC4A3P48751 1232 aa7.74□□□□□ -1.17
TMCC3-202ENST00000548918 MCCD1P59942 119 aaPredicted RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 PIK3R5Q8WYR1 880 aa7.74□□□□□ -1.17
TMCC3-202ENST00000548918 SALL2Q9Y467 1007 aaPredicted RBP7.74□□□□□ -1.17
TMCC3-202ENST00000548918 TMC7Q7Z402 723 aa7.73□□□□□ -1.17
TMCC3-202ENST00000548918 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
TMCC3-202ENST00000548918 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
TMCC3-202ENST00000548918 SCAMP3O14828 347 aaKnown RBP7.72□□□□□ -1.17
TMCC3-202ENST00000548918 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
TMCC3-202ENST00000548918 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
TMCC3-202ENST00000548918 SH3BP5LQ7L8J4 393 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 DPH6Q7L8W6 267 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 SCUBE3Q8IX30 993 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
TMCC3-202ENST00000548918 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
TMCC3-202ENST00000548918 VPS9D1Q9Y2B5 631 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 AXIN2Q9Y2T1 843 aa7.72□□□□□ -1.17
TMCC3-202ENST00000548918 POTEB2H3BUK9 544 aa7.71□□□□□ -1.18
TMCC3-202ENST00000548918 CANXP27824 592 aaKnown RBP7.71□□□□□ -1.18
TMCC3-202ENST00000548918 ZFRQ96KR1 1074 aaKnown RBP7.71□□□□□ -1.18
TMCC3-202ENST00000548918 HINFPQ9BQA5 517 aa7.71□□□□□ -1.18
TMCC3-202ENST00000548918 ARHGAP9Q9BRR9 750 aa7.71□□□□□ -1.18
TMCC3-202ENST00000548918 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
TMCC3-202ENST00000548918 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
TMCC3-202ENST00000548918 NPR3P17342 541 aa7.7□□□□□ -1.18
TMCC3-202ENST00000548918 FMR1Q06787 632 aaKnown RBP eCLIP7.7□□□□□ -1.18
TMCC3-202ENST00000548918 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms