RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
TMCC3-202ENST00000548918 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
TMCC3-202ENST00000548918 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
TMCC3-202ENST00000548918 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
TMCC3-202ENST00000548918 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
TMCC3-202ENST00000548918 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
TMCC3-202ENST00000548918 ADRA2BP18089 450 aa13.44□□□□□ -0.26
TMCC3-202ENST00000548918 KCNA4P22459 653 aa13.44□□□□□ -0.26
TMCC3-202ENST00000548918 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
TMCC3-202ENST00000548918 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
TMCC3-202ENST00000548918 FOXD1Q16676 465 aa12.87□□□□□ -0.35
TMCC3-202ENST00000548918 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
TMCC3-202ENST00000548918 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
TMCC3-202ENST00000548918 ZBTB22O15209 634 aa12.48□□□□□ -0.41
TMCC3-202ENST00000548918 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
TMCC3-202ENST00000548918 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
TMCC3-202ENST00000548918 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
TMCC3-202ENST00000548918 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
TMCC3-202ENST00000548918 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
TMCC3-202ENST00000548918 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
TMCC3-202ENST00000548918 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
TMCC3-202ENST00000548918 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
TMCC3-202ENST00000548918 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
TMCC3-202ENST00000548918 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
TMCC3-202ENST00000548918 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
TMCC3-202ENST00000548918 FKBP8Q14318 412 aa11.67□□□□□ -0.54
TMCC3-202ENST00000548918 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
TMCC3-202ENST00000548918 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
TMCC3-202ENST00000548918 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
TMCC3-202ENST00000548918 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
TMCC3-202ENST00000548918 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
TMCC3-202ENST00000548918 MSH5O43196 834 aa11.33□□□□□ -0.6
TMCC3-202ENST00000548918 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
TMCC3-202ENST00000548918 ATF5Q9Y2D1 282 aaPredicted RBP11.2□□□□□ -0.62
TMCC3-202ENST00000548918 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
TMCC3-202ENST00000548918 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
TMCC3-202ENST00000548918 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
TMCC3-202ENST00000548918 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
TMCC3-202ENST00000548918 BCANQ96GW7 911 aa10.94□□□□□ -0.66
TMCC3-202ENST00000548918 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
TMCC3-202ENST00000548918 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
TMCC3-202ENST00000548918 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
TMCC3-202ENST00000548918 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
TMCC3-202ENST00000548918 PKD2Q13563 968 aa10.81□□□□□ -0.68
TMCC3-202ENST00000548918 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
TMCC3-202ENST00000548918 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
TMCC3-202ENST00000548918 PROM2Q8N271 834 aa10.8□□□□□ -0.68
TMCC3-202ENST00000548918 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
TMCC3-202ENST00000548918 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
TMCC3-202ENST00000548918 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
TMCC3-202ENST00000548918 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
TMCC3-202ENST00000548918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
TMCC3-202ENST00000548918 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
TMCC3-202ENST00000548918 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
TMCC3-202ENST00000548918 FBLN2P98095 1184 aa10.73□□□□□ -0.69
TMCC3-202ENST00000548918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.71□□□□□ -0.69
TMCC3-202ENST00000548918 HNRNPUL2Q1KMD3 747 aaKnown RBP10.71□□□□□ -0.69
TMCC3-202ENST00000548918 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
TMCC3-202ENST00000548918 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
TMCC3-202ENST00000548918 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
TMCC3-202ENST00000548918 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
TMCC3-202ENST00000548918 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
TMCC3-202ENST00000548918 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
TMCC3-202ENST00000548918 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
TMCC3-202ENST00000548918 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
TMCC3-202ENST00000548918 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.73
TMCC3-202ENST00000548918 RGL2O15211 777 aa10.44□□□□□ -0.74
TMCC3-202ENST00000548918 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
TMCC3-202ENST00000548918 TULP1O00294 542 aaPredicted RBP10.38□□□□□ -0.75
TMCC3-202ENST00000548918 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
TMCC3-202ENST00000548918 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
TMCC3-202ENST00000548918 APLP2Q06481 763 aa10.34□□□□□ -0.75
TMCC3-202ENST00000548918 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
TMCC3-202ENST00000548918 POLA2Q14181 598 aa10.29□□□□□ -0.76
TMCC3-202ENST00000548918 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.77
TMCC3-202ENST00000548918 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.77
TMCC3-202ENST00000548918 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
TMCC3-202ENST00000548918 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
TMCC3-202ENST00000548918 NBR1Q14596 966 aa10.24□□□□□ -0.77
TMCC3-202ENST00000548918 DAXXQ9UER7 740 aaPredicted RBP10.19□□□□□ -0.78
TMCC3-202ENST00000548918 ARXQ96QS3 562 aa10.18□□□□□ -0.78
TMCC3-202ENST00000548918 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
TMCC3-202ENST00000548918 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
TMCC3-202ENST00000548918 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
TMCC3-202ENST00000548918 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
TMCC3-202ENST00000548918 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
TMCC3-202ENST00000548918 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
TMCC3-202ENST00000548918 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
TMCC3-202ENST00000548918 MIER1Q8N108 512 aa10.07□□□□□ -0.8
TMCC3-202ENST00000548918 CAPN15O75808 1086 aa10.05□□□□□ -0.8
TMCC3-202ENST00000548918 ABCB7O75027 752 aa10.04□□□□□ -0.8
TMCC3-202ENST00000548918 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
TMCC3-202ENST00000548918 SSUH2Q9Y2M2 353 aa10.03□□□□□ -0.8
TMCC3-202ENST00000548918 GTPBP6O43824 516 aaPredicted RBP10.02□□□□□ -0.81
TMCC3-202ENST00000548918 ZBTB12Q9Y330 459 aaPredicted RBP10.02□□□□□ -0.81
TMCC3-202ENST00000548918 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
TMCC3-202ENST00000548918 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMCC3-202ENST00000548918 C14orf37Q86TY3 774 aa9.95□□□□□ -0.82
TMCC3-202ENST00000548918 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
TMCC3-202ENST00000548918 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms