RNA–Protein interactions for RNA: ENST00000548733.1

NR4A1-210, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 535 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-210ENST00000548733 PANK3Q9H999 370 aa17.04■□□□□ 0.32
NR4A1-210ENST00000548733 COL18A1P39060 1754 aa17.04■□□□□ 0.32
NR4A1-210ENST00000548733 NSD2O96028 1365 aa17.03■□□□□ 0.32
NR4A1-210ENST00000548733 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
NR4A1-210ENST00000548733 RTL1A6NKG5 1358 aa17.01■□□□□ 0.31
NR4A1-210ENST00000548733 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
NR4A1-210ENST00000548733 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
NR4A1-210ENST00000548733 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
NR4A1-210ENST00000548733 EVA1CP58658 441 aa17■□□□□ 0.31
NR4A1-210ENST00000548733 CRB1P82279 1406 aa16.99■□□□□ 0.31
NR4A1-210ENST00000548733 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
NR4A1-210ENST00000548733 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
NR4A1-210ENST00000548733 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
NR4A1-210ENST00000548733 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
NR4A1-210ENST00000548733 WDR17Q8IZU2 1322 aa16.97■□□□□ 0.31
NR4A1-210ENST00000548733 LARP1Q6PKG0 1096 aaKnown RBP16.97■□□□□ 0.31
NR4A1-210ENST00000548733 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
NR4A1-210ENST00000548733 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
NR4A1-210ENST00000548733 ERBB3P21860 1342 aa16.96■□□□□ 0.3
NR4A1-210ENST00000548733 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
NR4A1-210ENST00000548733 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
NR4A1-210ENST00000548733 A0A0G2JS52 829 aa16.95■□□□□ 0.3
NR4A1-210ENST00000548733 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
NR4A1-210ENST00000548733 MYT1Q01538 1121 aa16.95■□□□□ 0.3
NR4A1-210ENST00000548733 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
NR4A1-210ENST00000548733 SOCS7O14512 581 aa16.94■□□□□ 0.3
NR4A1-210ENST00000548733 AMPHP49418 695 aa16.94■□□□□ 0.3
NR4A1-210ENST00000548733 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
NR4A1-210ENST00000548733 FAM98CQ17RN3 349 aaKnown RBP16.94■□□□□ 0.3
NR4A1-210ENST00000548733 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
NR4A1-210ENST00000548733 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
NR4A1-210ENST00000548733 PEAK1Q9H792 1746 aa16.93■□□□□ 0.3
NR4A1-210ENST00000548733 FLT4P35916 1363 aa16.93■□□□□ 0.3
NR4A1-210ENST00000548733 IP6K1Q92551 441 aa16.93■□□□□ 0.3
NR4A1-210ENST00000548733 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
NR4A1-210ENST00000548733 HOXC9P31274 260 aa16.92■□□□□ 0.3
NR4A1-210ENST00000548733 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
NR4A1-210ENST00000548733 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
NR4A1-210ENST00000548733 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
NR4A1-210ENST00000548733 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
NR4A1-210ENST00000548733 FBLN1P23142 703 aa16.91■□□□□ 0.3
NR4A1-210ENST00000548733 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
NR4A1-210ENST00000548733 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
NR4A1-210ENST00000548733 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
NR4A1-210ENST00000548733 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
NR4A1-210ENST00000548733 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
NR4A1-210ENST00000548733 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 INSRP06213 1382 aa16.89■□□□□ 0.29
NR4A1-210ENST00000548733 PER1O15534 1290 aaPredicted RBP16.88■□□□□ 0.29
NR4A1-210ENST00000548733 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
NR4A1-210ENST00000548733 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
NR4A1-210ENST00000548733 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
NR4A1-210ENST00000548733 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
NR4A1-210ENST00000548733 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
NR4A1-210ENST00000548733 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
NR4A1-210ENST00000548733 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
NR4A1-210ENST00000548733 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
NR4A1-210ENST00000548733 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
NR4A1-210ENST00000548733 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
NR4A1-210ENST00000548733 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
NR4A1-210ENST00000548733 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
NR4A1-210ENST00000548733 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
NR4A1-210ENST00000548733 IL2RBP14784 551 aa16.8■□□□□ 0.28
NR4A1-210ENST00000548733 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
NR4A1-210ENST00000548733 DDB1Q16531 1140 aa16.8■□□□□ 0.28
NR4A1-210ENST00000548733 OVOS2A0A0G2JMS6 1433 aa16.79■□□□□ 0.28
NR4A1-210ENST00000548733 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
NR4A1-210ENST00000548733 EP400Q96L91 3159 aa16.79■□□□□ 0.28
NR4A1-210ENST00000548733 MEGF6O75095 1541 aa16.79■□□□□ 0.28
NR4A1-210ENST00000548733 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
NR4A1-210ENST00000548733 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
NR4A1-210ENST00000548733 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
NR4A1-210ENST00000548733 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
NR4A1-210ENST00000548733 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
NR4A1-210ENST00000548733 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
NR4A1-210ENST00000548733 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
NR4A1-210ENST00000548733 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
NR4A1-210ENST00000548733 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
NR4A1-210ENST00000548733 EXOC5O00471 708 aa16.74■□□□□ 0.27
NR4A1-210ENST00000548733 MTHFSP49914 203 aa16.74■□□□□ 0.27
NR4A1-210ENST00000548733 FAM182BQ5T319 152 aa16.74■□□□□ 0.27
NR4A1-210ENST00000548733 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
NR4A1-210ENST00000548733 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
NR4A1-210ENST00000548733 PARD3Q8TEW0 1356 aa16.73■□□□□ 0.27
NR4A1-210ENST00000548733 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
NR4A1-210ENST00000548733 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
NR4A1-210ENST00000548733 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 BCL9O00512 1426 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
NR4A1-210ENST00000548733 EYA1Q99502 592 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
NR4A1-210ENST00000548733 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
NR4A1-210ENST00000548733 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
NR4A1-210ENST00000548733 MARCH10Q8NA82 808 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms