RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 TRIM37O94972 964 aa22.81■■□□□ 1.24
RAPGEF3-217ENST00000548434 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
RAPGEF3-217ENST00000548434 LRRC37A3O60309 1634 aa22.8■■□□□ 1.24
RAPGEF3-217ENST00000548434 KCNH5Q8NCM2 988 aa22.8■■□□□ 1.24
RAPGEF3-217ENST00000548434 ABCC6O95255 1503 aa22.8■■□□□ 1.24
RAPGEF3-217ENST00000548434 RREB1Q92766 1687 aa22.79■■□□□ 1.24
RAPGEF3-217ENST00000548434 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
RAPGEF3-217ENST00000548434 LRP5O75197 1615 aa22.79■■□□□ 1.24
RAPGEF3-217ENST00000548434 ST20-MTHFSA0A0A6YYL1 179 aa22.77■■□□□ 1.24
RAPGEF3-217ENST00000548434 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
RAPGEF3-217ENST00000548434 NME9Q86XW9 330 aa22.77■■□□□ 1.24
RAPGEF3-217ENST00000548434 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
RAPGEF3-217ENST00000548434 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
RAPGEF3-217ENST00000548434 CARD10Q9BWT7 1032 aa22.75■■□□□ 1.23
RAPGEF3-217ENST00000548434 LTN1O94822 1766 aa22.75■■□□□ 1.23
RAPGEF3-217ENST00000548434 BCL9O00512 1426 aa22.74■■□□□ 1.23
RAPGEF3-217ENST00000548434 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
RAPGEF3-217ENST00000548434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
RAPGEF3-217ENST00000548434 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
RAPGEF3-217ENST00000548434 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
RAPGEF3-217ENST00000548434 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
RAPGEF3-217ENST00000548434 PSDA5PKW4 1024 aaPredicted RBP22.73■■□□□ 1.23
RAPGEF3-217ENST00000548434 TOM1L2Q6ZVM7 507 aa22.73■■□□□ 1.23
RAPGEF3-217ENST00000548434 PARD3Q8TEW0 1356 aa22.73■■□□□ 1.23
RAPGEF3-217ENST00000548434 APBA3O96018 575 aa22.72■■□□□ 1.23
RAPGEF3-217ENST00000548434 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF3-217ENST00000548434 SOX12O15370 315 aa22.7■■□□□ 1.22
RAPGEF3-217ENST00000548434 PTF1AQ7RTS3 328 aa22.7■■□□□ 1.22
RAPGEF3-217ENST00000548434 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
RAPGEF3-217ENST00000548434 RGPD3A6NKT7 1758 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF3-217ENST00000548434 RGPD4Q7Z3J3 1758 aa22.69■■□□□ 1.22
RAPGEF3-217ENST00000548434 OVOS2A0A0G2JMS6 1433 aa22.69■■□□□ 1.22
RAPGEF3-217ENST00000548434 HDGFL2Q7Z4V5 671 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF3-217ENST00000548434 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
RAPGEF3-217ENST00000548434 C11orf95C9JLR9 678 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF3-217ENST00000548434 DDB1Q16531 1140 aa22.68■■□□□ 1.22
RAPGEF3-217ENST00000548434 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF3-217ENST00000548434 TERF2IPQ9NYB0 399 aa22.68■■□□□ 1.22
RAPGEF3-217ENST00000548434 ERBB3P21860 1342 aa22.67■■□□□ 1.22
RAPGEF3-217ENST00000548434 R3HDM1Q15032 1099 aaKnown RBP22.67■■□□□ 1.22
RAPGEF3-217ENST00000548434 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
RAPGEF3-217ENST00000548434 PLSCR1O15162 318 aa22.64■■□□□ 1.21
RAPGEF3-217ENST00000548434 USP47Q96K76 1375 aa22.63■■□□□ 1.21
RAPGEF3-217ENST00000548434 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
RAPGEF3-217ENST00000548434 PROM2Q8N271 834 aa22.63■■□□□ 1.21
RAPGEF3-217ENST00000548434 BCL11BQ9C0K0 894 aaPredicted RBP22.63■■□□□ 1.21
RAPGEF3-217ENST00000548434 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
RAPGEF3-217ENST00000548434 TNS2Q63HR2 1409 aa22.6■■□□□ 1.21
RAPGEF3-217ENST00000548434 IP6K1Q92551 441 aa22.6■■□□□ 1.21
RAPGEF3-217ENST00000548434 CSB-PGBD3P0DP91 1061 aa22.59■■□□□ 1.21
RAPGEF3-217ENST00000548434 FBLN1P23142 703 aa22.59■■□□□ 1.21
RAPGEF3-217ENST00000548434 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
RAPGEF3-217ENST00000548434 EXOC5O00471 708 aa22.58■■□□□ 1.21
RAPGEF3-217ENST00000548434 ANKRD24Q8TF21 1146 aa22.58■■□□□ 1.21
RAPGEF3-217ENST00000548434 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
RAPGEF3-217ENST00000548434 FYB1O15117 783 aa22.57■■□□□ 1.2
RAPGEF3-217ENST00000548434 RGPD2P0DJD1 1756 aa22.57■■□□□ 1.2
RAPGEF3-217ENST00000548434 MYOM1P52179 1685 aa22.56■■□□□ 1.2
RAPGEF3-217ENST00000548434 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
RAPGEF3-217ENST00000548434 FAM208AQ9UK61 1670 aaKnown RBP22.55■■□□□ 1.2
RAPGEF3-217ENST00000548434 TMF1P82094 1093 aa22.55■■□□□ 1.2
RAPGEF3-217ENST00000548434 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
RAPGEF3-217ENST00000548434 KCNQ2O43526 872 aa22.54■■□□□ 1.2
RAPGEF3-217ENST00000548434 NLRP2Q9NX02 1062 aa22.54■■□□□ 1.2
RAPGEF3-217ENST00000548434 IL2RBP14784 551 aa22.53■■□□□ 1.2
RAPGEF3-217ENST00000548434 CARD14Q9BXL6 1004 aa22.53■■□□□ 1.2
RAPGEF3-217ENST00000548434 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
RAPGEF3-217ENST00000548434 CASZ1Q86V15 1759 aa22.53■■□□□ 1.2
RAPGEF3-217ENST00000548434 HOXC9P31274 260 aa22.52■■□□□ 1.2
RAPGEF3-217ENST00000548434 COG3Q96JB2 828 aa22.52■■□□□ 1.2
RAPGEF3-217ENST00000548434 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
RAPGEF3-217ENST00000548434 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
RAPGEF3-217ENST00000548434 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
RAPGEF3-217ENST00000548434 BTAF1O14981 1849 aa22.48■■□□□ 1.19
RAPGEF3-217ENST00000548434 KIF20BQ96Q89 1820 aa22.48■■□□□ 1.19
RAPGEF3-217ENST00000548434 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
RAPGEF3-217ENST00000548434 TXNRD1Q16881 649 aa22.46■■□□□ 1.19
RAPGEF3-217ENST00000548434 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
RAPGEF3-217ENST00000548434 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
RAPGEF3-217ENST00000548434 RTL1A6NKG5 1358 aa22.45■■□□□ 1.18
RAPGEF3-217ENST00000548434 RRS1Q15050 365 aaKnown RBP22.44■■□□□ 1.18
RAPGEF3-217ENST00000548434 CDCA8Q53HL2 280 aa22.44■■□□□ 1.18
RAPGEF3-217ENST00000548434 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
RAPGEF3-217ENST00000548434 ACSBG1Q96GR2 724 aa22.43■■□□□ 1.18
RAPGEF3-217ENST00000548434 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
RAPGEF3-217ENST00000548434 MEGF6O75095 1541 aa22.42■■□□□ 1.18
RAPGEF3-217ENST00000548434 NBPF6Q5VWK0 638 aa22.42■■□□□ 1.18
RAPGEF3-217ENST00000548434 NBPF4Q96M43 638 aa22.42■■□□□ 1.18
RAPGEF3-217ENST00000548434 AMPHP49418 695 aa22.41■■□□□ 1.18
RAPGEF3-217ENST00000548434 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
RAPGEF3-217ENST00000548434 INSRP06213 1382 aa22.39■■□□□ 1.18
RAPGEF3-217ENST00000548434 NSD2O96028 1365 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 SLC15A2Q16348 729 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 LRRC4BQ9NT99 713 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 NSD3Q9BZ95 1437 aa22.38■■□□□ 1.17
RAPGEF3-217ENST00000548434 MAP2P11137 1827 aaKnown RBP22.37■■□□□ 1.17
RAPGEF3-217ENST00000548434 SPON1Q9HCB6 807 aa22.37■■□□□ 1.17
RAPGEF3-217ENST00000548434 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms