RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 ALS2Q96Q42 1657 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 ATP10DQ9P241 1426 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 MAP3K5Q99683 1374 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
RNF41-204ENST00000548120 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
RNF41-204ENST00000548120 EVX2Q03828 476 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 SLC15A2Q16348 729 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
RNF41-204ENST00000548120 PPLO60437 1756 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
RNF41-204ENST00000548120 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
RNF41-204ENST00000548120 PROM2Q8N271 834 aa9.9□□□□□ -0.82
RNF41-204ENST00000548120 RGPD8O14715 1765 aaPredicted RBP9.9□□□□□ -0.82
RNF41-204ENST00000548120 CRYBG1Q9Y4K1 1723 aa9.9□□□□□ -0.83
RNF41-204ENST00000548120 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
RNF41-204ENST00000548120 GOLGB1Q14789 3259 aaKnown RBP9.88□□□□□ -0.83
RNF41-204ENST00000548120 C11orf95C9JLR9 678 aaPredicted RBP9.88□□□□□ -0.83
RNF41-204ENST00000548120 TXNRD1Q16881 649 aa9.88□□□□□ -0.83
RNF41-204ENST00000548120 NUTM2GQ5VZR2 741 aa9.88□□□□□ -0.83
RNF41-204ENST00000548120 ZNF526Q8TF50 670 aaPredicted RBP9.88□□□□□ -0.83
RNF41-204ENST00000548120 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
RNF41-204ENST00000548120 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
RNF41-204ENST00000548120 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
RNF41-204ENST00000548120 PIK3C2GO75747 1445 aa9.87□□□□□ -0.83
RNF41-204ENST00000548120 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
RNF41-204ENST00000548120 PHRF1Q9P1Y6 1649 aaKnown RBP9.86□□□□□ -0.83
RNF41-204ENST00000548120 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
RNF41-204ENST00000548120 COL13A1Q5TAT6 717 aaPredicted RBP9.86□□□□□ -0.83
RNF41-204ENST00000548120 NLGN2Q8NFZ4 835 aa9.86□□□□□ -0.83
RNF41-204ENST00000548120 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
RNF41-204ENST00000548120 THRAP3Q9Y2W1 955 aaKnown RBP9.86□□□□□ -0.83
RNF41-204ENST00000548120 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
RNF41-204ENST00000548120 ATP7BP35670 1465 aa9.85□□□□□ -0.83
RNF41-204ENST00000548120 PRR36Q9H6K5 1346 aa9.85□□□□□ -0.83
RNF41-204ENST00000548120 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
RNF41-204ENST00000548120 DDB1Q16531 1140 aa9.85□□□□□ -0.83
RNF41-204ENST00000548120 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
RNF41-204ENST00000548120 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.834e-8■■■□□ 18.4
RNF41-204ENST00000548120 SIRT1Q96EB6 747 aa9.84□□□□□ -0.83
RNF41-204ENST00000548120 POGKQ9P215 609 aa9.84□□□□□ -0.83
RNF41-204ENST00000548120 ANKRD30BQ9BXX2 1392 aa9.84□□□□□ -0.83
RNF41-204ENST00000548120 TULP4Q9NRJ4 1543 aa9.83□□□□□ -0.84
RNF41-204ENST00000548120 GRIN3BO60391 1043 aa9.83□□□□□ -0.84
RNF41-204ENST00000548120 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
RNF41-204ENST00000548120 COL5A2P05997 1499 aaPredicted RBP9.83□□□□□ -0.84
RNF41-204ENST00000548120 CRB1P82279 1406 aa9.82□□□□□ -0.84
RNF41-204ENST00000548120 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
RNF41-204ENST00000548120 POLD1P28340 1107 aa9.82□□□□□ -0.84
RNF41-204ENST00000548120 PRELPP51888 382 aa9.82□□□□□ -0.84
RNF41-204ENST00000548120 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
RNF41-204ENST00000548120 EIF3AQ14152 1382 aaKnown RBP9.82□□□□□ -0.84
RNF41-204ENST00000548120 LMO7Q8WWI1 1683 aa9.82□□□□□ -0.84
RNF41-204ENST00000548120 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
RNF41-204ENST00000548120 SLC34A2O95436 690 aa9.81□□□□□ -0.84
RNF41-204ENST00000548120 APLP1P51693 650 aa9.81□□□□□ -0.84
RNF41-204ENST00000548120 ZNF827Q17R98 1081 aa9.81□□□□□ -0.84
RNF41-204ENST00000548120 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
RNF41-204ENST00000548120 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
RNF41-204ENST00000548120 ADCY9O60503 1353 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 CPDO75976 1380 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 AATKQ6ZMQ8 1374 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 RAB3GAP2Q9H2M9 1393 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 CFAP70Q5T0N1 1121 aa9.8□□□□□ -0.84
RNF41-204ENST00000548120 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
RNF41-204ENST00000548120 SPATA31E1Q6ZUB1 1445 aa9.79□□□□□ -0.84
RNF41-204ENST00000548120 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
RNF41-204ENST00000548120 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
RNF41-204ENST00000548120 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
RNF41-204ENST00000548120 C14orf93Q9H972 538 aaKnown RBP9.78□□□□□ -0.84
RNF41-204ENST00000548120 BCL9O00512 1426 aa9.78□□□□□ -0.84
RNF41-204ENST00000548120 SBF2Q86WG5 1849 aa9.77□□□□□ -0.84
RNF41-204ENST00000548120 WASLO00401 505 aaPredicted RBP9.77□□□□□ -0.85
RNF41-204ENST00000548120 DNAJC5GQ8N7S2 189 aa9.77□□□□□ -0.85
RNF41-204ENST00000548120 KIF3CO14782 793 aa9.76□□□□□ -0.85
RNF41-204ENST00000548120 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
RNF41-204ENST00000548120 ACSBG1Q96GR2 724 aa9.76□□□□□ -0.85
RNF41-204ENST00000548120 TRAK1Q9UPV9 953 aa9.76□□□□□ -0.85
RNF41-204ENST00000548120 USP19O94966 1318 aa9.76□□□□□ -0.85
RNF41-204ENST00000548120 SLC16A10Q8TF71 515 aa9.75□□□□□ -0.85
RNF41-204ENST00000548120 PNPLA7Q6ZV29 1317 aa9.75□□□□□ -0.85
RNF41-204ENST00000548120 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
RNF41-204ENST00000548120 GCP02774 474 aa9.74□□□□□ -0.85
RNF41-204ENST00000548120 HTRA3P83110 453 aa9.74□□□□□ -0.85
RNF41-204ENST00000548120 GABBR2O75899 941 aa9.73□□□□□ -0.85
RNF41-204ENST00000548120 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
RNF41-204ENST00000548120 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
RNF41-204ENST00000548120 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
RNF41-204ENST00000548120 CDCA7Q9BWT1 371 aaPredicted RBP9.73□□□□□ -0.85
RNF41-204ENST00000548120 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
RNF41-204ENST00000548120 WWC3Q9ULE0 1092 aa9.73□□□□□ -0.85
RNF41-204ENST00000548120 KLRG1Q96E93 195 aa9.72□□□□□ -0.85
RNF41-204ENST00000548120 TFCP2L1Q9NZI6 479 aa9.72□□□□□ -0.85
RNF41-204ENST00000548120 ACEP12821 1306 aa9.72□□□□□ -0.85
RNF41-204ENST00000548120 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
RNF41-204ENST00000548120 TNS2Q63HR2 1409 aa9.72□□□□□ -0.85
RNF41-204ENST00000548120 NHSQ6T4R5 1651 aa9.71□□□□□ -0.85
RNF41-204ENST00000548120 AKAP12Q02952 1782 aa9.71□□□□□ -0.85
RNF41-204ENST00000548120 EXOC5O00471 708 aa9.71□□□□□ -0.86
RNF41-204ENST00000548120 NLRP13Q86W25 1043 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms