RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FAM98CQ17RN3 349 aaKnown RBP25.93■■□□□ 1.74
PRPF40B-206ENST00000547764 GGNBP2Q9H3C7 697 aa25.93■■□□□ 1.74
PRPF40B-206ENST00000547764 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
PRPF40B-206ENST00000547764 USP35Q9P2H5 1018 aa25.9■■□□□ 1.74
PRPF40B-206ENST00000547764 A0A0G2JS52 829 aa25.88■■□□□ 1.73
PRPF40B-206ENST00000547764 MYT1Q01538 1121 aa25.88■■□□□ 1.73
PRPF40B-206ENST00000547764 KIF7Q2M1P5 1343 aa25.88■■□□□ 1.73
PRPF40B-206ENST00000547764 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.73
PRPF40B-206ENST00000547764 PANK3Q9H999 370 aa25.87■■□□□ 1.73
PRPF40B-206ENST00000547764 FBLN1P23142 703 aa25.86■■□□□ 1.73
PRPF40B-206ENST00000547764 ABCC6O95255 1503 aa25.86■■□□□ 1.73
PRPF40B-206ENST00000547764 RGPD5Q99666 1765 aa25.86■■□□□ 1.73
PRPF40B-206ENST00000547764 LTN1O94822 1766 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 TCP11L2Q8N4U5 519 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 BRWD3Q6RI45 1802 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 CRB1P82279 1406 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 WDR17Q8IZU2 1322 aa25.85■■□□□ 1.73
PRPF40B-206ENST00000547764 BARGINQ6ZT62 677 aa25.84■■□□□ 1.73
PRPF40B-206ENST00000547764 TOM1L2Q6ZVM7 507 aa25.84■■□□□ 1.73
PRPF40B-206ENST00000547764 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
PRPF40B-206ENST00000547764 CSB-PGBD3P0DP91 1061 aa25.82■■□□□ 1.72
PRPF40B-206ENST00000547764 KRT27Q7Z3Y8 459 aa25.82■■□□□ 1.72
PRPF40B-206ENST00000547764 THRAP3Q9Y2W1 955 aaKnown RBP25.82■■□□□ 1.72
PRPF40B-206ENST00000547764 THSD7AQ9UPZ6 1657 aa25.82■■□□□ 1.72
PRPF40B-206ENST00000547764 MAP3K19Q56UN5 1328 aa25.82■■□□□ 1.72
PRPF40B-206ENST00000547764 IP6K1Q92551 441 aa25.8■■□□□ 1.72
PRPF40B-206ENST00000547764 RRS1Q15050 365 aaKnown RBP25.78■■□□□ 1.72
PRPF40B-206ENST00000547764 ERBB3P21860 1342 aa25.78■■□□□ 1.72
PRPF40B-206ENST00000547764 AMPHP49418 695 aa25.77■■□□□ 1.72
PRPF40B-206ENST00000547764 ANKRD24Q8TF21 1146 aa25.77■■□□□ 1.72
PRPF40B-206ENST00000547764 CARD10Q9BWT7 1032 aa25.77■■□□□ 1.72
PRPF40B-206ENST00000547764 BLMP54132 1417 aaPredicted RBP25.77■■□□□ 1.72
PRPF40B-206ENST00000547764 HOXC9P31274 260 aa25.76■■□□□ 1.71
PRPF40B-206ENST00000547764 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
PRPF40B-206ENST00000547764 CCDC7Q96M83 1385 aa25.76■■□□□ 1.71
PRPF40B-206ENST00000547764 EP400Q96L91 3159 aa25.76■■□□□ 1.71
PRPF40B-206ENST00000547764 NLRP2Q9NX02 1062 aa25.73■■□□□ 1.71
PRPF40B-206ENST00000547764 FAM182BQ5T319 152 aa25.72■■□□□ 1.71
PRPF40B-206ENST00000547764 LTV1Q96GA3 475 aaPredicted RBP25.72■■□□□ 1.71
PRPF40B-206ENST00000547764 KNSTRNQ9Y448 316 aa25.72■■□□□ 1.71
PRPF40B-206ENST00000547764 RTL1A6NKG5 1358 aa25.71■■□□□ 1.71
PRPF40B-206ENST00000547764 PDE3BQ13370 1112 aa25.69■■□□□ 1.7
PRPF40B-206ENST00000547764 NSD2O96028 1365 aa25.69■■□□□ 1.7
PRPF40B-206ENST00000547764 CCDC125Q86Z20 511 aa25.68■■□□□ 1.7
PRPF40B-206ENST00000547764 CDCA7Q9BWT1 371 aaPredicted RBP25.68■■□□□ 1.7
PRPF40B-206ENST00000547764 EMILIN1Q9Y6C2 1016 aa25.68■■□□□ 1.7
PRPF40B-206ENST00000547764 PARP4Q9UKK3 1724 aaKnown RBP25.68■■□□□ 1.7
PRPF40B-206ENST00000547764 ANKRD26Q9UPS8 1709 aa25.68■■□□□ 1.7
PRPF40B-206ENST00000547764 TNNT2P45379 298 aaPredicted RBP25.67■■□□□ 1.7
PRPF40B-206ENST00000547764 KIF24Q5T7B8 1368 aa25.67■■□□□ 1.7
PRPF40B-206ENST00000547764 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
PRPF40B-206ENST00000547764 DISP2A7MBM2 1401 aa25.66■■□□□ 1.7
PRPF40B-206ENST00000547764 PER1O15534 1290 aaPredicted RBP25.66■■□□□ 1.7
PRPF40B-206ENST00000547764 HSP90AB2PQ58FF8 381 aa25.66■■□□□ 1.7
PRPF40B-206ENST00000547764 FLT4P35916 1363 aa25.66■■□□□ 1.7
PRPF40B-206ENST00000547764 WNK3Q9BYP7 1800 aa25.65■■□□□ 1.7
PRPF40B-206ENST00000547764 DDB1Q16531 1140 aa25.65■■□□□ 1.7
PRPF40B-206ENST00000547764 AMER1Q5JTC6 1135 aaPredicted RBP25.65■■□□□ 1.7
PRPF40B-206ENST00000547764 PPM1GO15355 546 aaPredicted RBP25.64■■□□□ 1.7
PRPF40B-206ENST00000547764 POLKQ9UBT6 870 aa25.64■■□□□ 1.7
PRPF40B-206ENST00000547764 INSRP06213 1382 aa25.64■■□□□ 1.69
PRPF40B-206ENST00000547764 FAM196AQ6ZSG2 479 aa25.63■■□□□ 1.69
PRPF40B-206ENST00000547764 MORC1Q86VD1 984 aa25.63■■□□□ 1.69
PRPF40B-206ENST00000547764 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
PRPF40B-206ENST00000547764 MAP2P11137 1827 aaKnown RBP25.62■■□□□ 1.69
PRPF40B-206ENST00000547764 FAM208AQ9UK61 1670 aaKnown RBP25.61■■□□□ 1.69
PRPF40B-206ENST00000547764 IL2RBP14784 551 aa25.61■■□□□ 1.69
PRPF40B-206ENST00000547764 EXOC5O00471 708 aa25.6■■□□□ 1.69
PRPF40B-206ENST00000547764 SMG6Q86US8 1419 aaKnown RBP25.6■■□□□ 1.69
PRPF40B-206ENST00000547764 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
PRPF40B-206ENST00000547764 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
PRPF40B-206ENST00000547764 SF3B2Q13435 895 aaKnown RBP25.58■■□□□ 1.69
PRPF40B-206ENST00000547764 RGPD2P0DJD1 1756 aa25.58■■□□□ 1.69
PRPF40B-206ENST00000547764 MARCH10Q8NA82 808 aaPredicted RBP25.57■■□□□ 1.68
PRPF40B-206ENST00000547764 TRIM37O94972 964 aa25.55■■□□□ 1.68
PRPF40B-206ENST00000547764 CC2D1BQ5T0F9 858 aaKnown RBP25.55■■□□□ 1.68
PRPF40B-206ENST00000547764 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
PRPF40B-206ENST00000547764 OVOS2A0A0G2JMS6 1433 aa25.54■■□□□ 1.68
PRPF40B-206ENST00000547764 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
PRPF40B-206ENST00000547764 ZEB1P37275 1124 aaPredicted RBP25.54■■□□□ 1.68
PRPF40B-206ENST00000547764 DEFB132Q7Z7B7 95 aa25.54■■□□□ 1.68
PRPF40B-206ENST00000547764 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
PRPF40B-206ENST00000547764 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.67
PRPF40B-206ENST00000547764 BAG6P46379 1132 aa25.49■■□□□ 1.67
PRPF40B-206ENST00000547764 CNGB1Q14028 1251 aaPredicted RBP25.49■■□□□ 1.67
PRPF40B-206ENST00000547764 EIF4A2Q14240 407 aaKnown RBP25.49■■□□□ 1.67
PRPF40B-206ENST00000547764 MEGF6O75095 1541 aa25.48■■□□□ 1.67
PRPF40B-206ENST00000547764 BCL9O00512 1426 aa25.47■■□□□ 1.67
PRPF40B-206ENST00000547764 TNS1Q9HBL0 1735 aaKnown RBP25.47■■□□□ 1.67
PRPF40B-206ENST00000547764 RAPGEF4Q8WZA2 1011 aa25.47■■□□□ 1.67
PRPF40B-206ENST00000547764 EYA1Q99502 592 aa25.47■■□□□ 1.67
PRPF40B-206ENST00000547764 APBA3O96018 575 aa25.45■■□□□ 1.66
PRPF40B-206ENST00000547764 EN1Q05925 392 aaPredicted RBP25.45■■□□□ 1.66
PRPF40B-206ENST00000547764 NCAPD2Q15021 1401 aa25.45■■□□□ 1.66
PRPF40B-206ENST00000547764 TATP17735 454 aaPredicted RBP25.44■■□□□ 1.66
PRPF40B-206ENST00000547764 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
PRPF40B-206ENST00000547764 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
PRPF40B-206ENST00000547764 SBF2Q86WG5 1849 aa25.43■■□□□ 1.66
PRPF40B-206ENST00000547764 MTHFSP49914 203 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms