RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 SOX12O15370 315 aa14.22□□□□□ -0.13
LINC02409-201ENST00000547515 ONECUT3O60422 494 aaPredicted RBP14.22□□□□□ -0.13
LINC02409-201ENST00000547515 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
LINC02409-201ENST00000547515 NSD3Q9BZ95 1437 aa14.22□□□□□ -0.13
LINC02409-201ENST00000547515 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
LINC02409-201ENST00000547515 FYB1O15117 783 aa14.21□□□□□ -0.13
LINC02409-201ENST00000547515 EVA1CP58658 441 aa14.21□□□□□ -0.13
LINC02409-201ENST00000547515 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
LINC02409-201ENST00000547515 STRN4Q9NRL3 753 aa14.21□□□□□ -0.13
LINC02409-201ENST00000547515 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
LINC02409-201ENST00000547515 COG3Q96JB2 828 aa14.2□□□□□ -0.14
LINC02409-201ENST00000547515 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
LINC02409-201ENST00000547515 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
LINC02409-201ENST00000547515 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
LINC02409-201ENST00000547515 FAM208AQ9UK61 1670 aaKnown RBP14.19□□□□□ -0.14
LINC02409-201ENST00000547515 PARP4Q9UKK3 1724 aaKnown RBP14.18□□□□□ -0.14
LINC02409-201ENST00000547515 CRB1P82279 1406 aa14.18□□□□□ -0.14
LINC02409-201ENST00000547515 SEPT12Q8IYM1 358 aa14.18□□□□□ -0.14
LINC02409-201ENST00000547515 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
LINC02409-201ENST00000547515 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
LINC02409-201ENST00000547515 FAM98CQ17RN3 349 aaKnown RBP14.17□□□□□ -0.14
LINC02409-201ENST00000547515 PANK3Q9H999 370 aa14.17□□□□□ -0.14
LINC02409-201ENST00000547515 CGNL1Q0VF96 1302 aa14.16□□□□□ -0.14
LINC02409-201ENST00000547515 WDR17Q8IZU2 1322 aa14.16□□□□□ -0.14
LINC02409-201ENST00000547515 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
LINC02409-201ENST00000547515 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
LINC02409-201ENST00000547515 CCDC7Q96M83 1385 aa14.15□□□□□ -0.14
LINC02409-201ENST00000547515 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
LINC02409-201ENST00000547515 THRAP3Q9Y2W1 955 aaKnown RBP14.15□□□□□ -0.14
LINC02409-201ENST00000547515 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
LINC02409-201ENST00000547515 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
LINC02409-201ENST00000547515 UPF1Q92900 1129 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC02409-201ENST00000547515 ERBB3P21860 1342 aa14.14□□□□□ -0.15
LINC02409-201ENST00000547515 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 LRRC37A3O60309 1634 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 FBLN1P23142 703 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 IP6K1Q92551 441 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
LINC02409-201ENST00000547515 EP400Q96L91 3159 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 NSD2O96028 1365 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 A0A0G2JS52 829 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 MYT1Q01538 1121 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 KRT27Q7Z3Y8 459 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
LINC02409-201ENST00000547515 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
LINC02409-201ENST00000547515 CSB-PGBD3P0DP91 1061 aa14.11□□□□□ -0.15
LINC02409-201ENST00000547515 KAT6BQ8WYB5 2073 aa14.11□□□□□ -0.15
LINC02409-201ENST00000547515 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
LINC02409-201ENST00000547515 DISP2A7MBM2 1401 aa14.1□□□□□ -0.15
LINC02409-201ENST00000547515 HOXC9P31274 260 aa14.1□□□□□ -0.15
LINC02409-201ENST00000547515 AMPHP49418 695 aa14.1□□□□□ -0.15
LINC02409-201ENST00000547515 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
LINC02409-201ENST00000547515 ANKRD24Q8TF21 1146 aa14.1□□□□□ -0.15
LINC02409-201ENST00000547515 RGPD1P0DJD0 1748 aa14.1□□□□□ -0.15
LINC02409-201ENST00000547515 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
LINC02409-201ENST00000547515 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
LINC02409-201ENST00000547515 INSRP06213 1382 aa14.08□□□□□ -0.16
LINC02409-201ENST00000547515 FLT4P35916 1363 aa14.08□□□□□ -0.16
LINC02409-201ENST00000547515 TNS1Q9HBL0 1735 aaKnown RBP14.07□□□□□ -0.16
LINC02409-201ENST00000547515 PER1O15534 1290 aaPredicted RBP14.07□□□□□ -0.16
LINC02409-201ENST00000547515 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
LINC02409-201ENST00000547515 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
LINC02409-201ENST00000547515 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
LINC02409-201ENST00000547515 EMILIN1Q9Y6C2 1016 aa14.06□□□□□ -0.16
LINC02409-201ENST00000547515 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
LINC02409-201ENST00000547515 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
LINC02409-201ENST00000547515 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
LINC02409-201ENST00000547515 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
LINC02409-201ENST00000547515 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
LINC02409-201ENST00000547515 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
LINC02409-201ENST00000547515 DDB1Q16531 1140 aa14.04□□□□□ -0.16
LINC02409-201ENST00000547515 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
LINC02409-201ENST00000547515 NPC1L1Q9UHC9 1359 aa14.04□□□□□ -0.16
LINC02409-201ENST00000547515 FAM182BQ5T319 152 aa14.03□□□□□ -0.16
LINC02409-201ENST00000547515 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
LINC02409-201ENST00000547515 TNS2Q63HR2 1409 aa14.03□□□□□ -0.16
LINC02409-201ENST00000547515 IL2RBP14784 551 aa14.02□□□□□ -0.17
LINC02409-201ENST00000547515 TNNT2P45379 298 aaPredicted RBP14.02□□□□□ -0.17
LINC02409-201ENST00000547515 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
LINC02409-201ENST00000547515 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
LINC02409-201ENST00000547515 BCL9O00512 1426 aa14□□□□□ -0.17
LINC02409-201ENST00000547515 NCAPD2Q15021 1401 aa14□□□□□ -0.17
LINC02409-201ENST00000547515 EXOC5O00471 708 aa14□□□□□ -0.17
LINC02409-201ENST00000547515 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
LINC02409-201ENST00000547515 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
LINC02409-201ENST00000547515 NBPF4Q96M43 638 aa14□□□□□ -0.17
LINC02409-201ENST00000547515 PKD1L3Q7Z443 1732 aa13.99□□□□□ -0.17
LINC02409-201ENST00000547515 MARCH10Q8NA82 808 aaPredicted RBP13.99□□□□□ -0.17
LINC02409-201ENST00000547515 MEGF6O75095 1541 aa13.99□□□□□ -0.17
LINC02409-201ENST00000547515 SF3B2Q13435 895 aaKnown RBP13.98□□□□□ -0.17
LINC02409-201ENST00000547515 RGPD3A6NKT7 1758 aaPredicted RBP13.98□□□□□ -0.17
LINC02409-201ENST00000547515 RGPD4Q7Z3J3 1758 aa13.98□□□□□ -0.17
LINC02409-201ENST00000547515 NHSQ6T4R5 1651 aa13.98□□□□□ -0.17
LINC02409-201ENST00000547515 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
LINC02409-201ENST00000547515 TRIM37O94972 964 aa13.96□□□□□ -0.17
LINC02409-201ENST00000547515 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
LINC02409-201ENST00000547515 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
LINC02409-201ENST00000547515 RREB1Q92766 1687 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms