RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 USP19O94966 1318 aa34.96■■■■□ 3.19
PRDM4-202ENST00000547188 WNK3Q9BYP7 1800 aa34.93■■■■□ 3.18
PRDM4-202ENST00000547188 POLR3AO14802 1390 aaPredicted RBP34.93■■■■□ 3.18
PRDM4-202ENST00000547188 GCP02774 474 aa34.93■■■■□ 3.18
PRDM4-202ENST00000547188 TOPAZ1Q8N9V7 1692 aa34.92■■■■□ 3.18
PRDM4-202ENST00000547188 ARHGEF28Q8N1W1 1705 aaKnown RBP34.89■■■■□ 3.18
PRDM4-202ENST00000547188 SHANK3Q9BYB0 1731 aa34.89■■■■□ 3.18
PRDM4-202ENST00000547188 CDK19Q9BWU1 502 aa34.89■■■■□ 3.18
PRDM4-202ENST00000547188 MAP3K5Q99683 1374 aa34.88■■■■□ 3.17
PRDM4-202ENST00000547188 TOM1L2Q6ZVM7 507 aa34.88■■■■□ 3.17
PRDM4-202ENST00000547188 PELP1Q8IZL8 1130 aaKnown RBP34.87■■■■□ 3.17
PRDM4-202ENST00000547188 NLRP13Q86W25 1043 aa34.86■■■■□ 3.17
PRDM4-202ENST00000547188 KLHL34Q8N239 644 aa34.84■■■■□ 3.17
PRDM4-202ENST00000547188 KDM2AQ9Y2K7 1162 aa34.84■■■■□ 3.17
PRDM4-202ENST00000547188 BCL9O00512 1426 aa34.83■■■■□ 3.17
PRDM4-202ENST00000547188 CCDC61Q9Y6R9 512 aa34.81■■■■□ 3.16
PRDM4-202ENST00000547188 PLEKHG3A1L390 1219 aa34.8■■■■□ 3.16
PRDM4-202ENST00000547188 GOLGB1Q14789 3259 aaKnown RBP34.77■■■■□ 3.16
PRDM4-202ENST00000547188 COL18A1P39060 1754 aa34.77■■■■□ 3.16
PRDM4-202ENST00000547188 AATKQ6ZMQ8 1374 aa34.77■■■■□ 3.16
PRDM4-202ENST00000547188 PAPPAQ13219 1627 aa34.75■■■■□ 3.15
PRDM4-202ENST00000547188 RGPD5Q99666 1765 aa34.74■■■■□ 3.15
PRDM4-202ENST00000547188 AXIN2Q9Y2T1 843 aa34.74■■■■□ 3.15
PRDM4-202ENST00000547188 DCAF11Q8TEB1 546 aa34.72■■■■□ 3.15
PRDM4-202ENST00000547188 CDCA7Q9BWT1 371 aaPredicted RBP34.72■■■■□ 3.15
PRDM4-202ENST00000547188 WDR17Q8IZU2 1322 aa34.72■■■■□ 3.15
PRDM4-202ENST00000547188 ZNF827Q17R98 1081 aa34.71■■■■□ 3.15
PRDM4-202ENST00000547188 KAT6BQ8WYB5 2073 aa34.7■■■■□ 3.15
PRDM4-202ENST00000547188 NHSQ6T4R5 1651 aa34.7■■■■□ 3.14
PRDM4-202ENST00000547188 ACSBG1Q96GR2 724 aa34.69■■■■□ 3.14
PRDM4-202ENST00000547188 NLRP6P59044 892 aa34.68■■■■□ 3.14
PRDM4-202ENST00000547188 NLGN2Q8NFZ4 835 aa34.68■■■■□ 3.14
PRDM4-202ENST00000547188 EXOC5O00471 708 aa34.67■■■■□ 3.14
PRDM4-202ENST00000547188 SLIT3O75094 1523 aa34.66■■■■□ 3.14
PRDM4-202ENST00000547188 PPIP5K1Q6PFW1 1433 aa34.64■■■■□ 3.14
PRDM4-202ENST00000547188 BTAF1O14981 1849 aa34.63■■■■□ 3.13
PRDM4-202ENST00000547188 CSB-PGBD3P0DP91 1061 aa34.62■■■■□ 3.13
PRDM4-202ENST00000547188 YBX3P16989 372 aaKnown RBP eCLIP34.61■■■■□ 3.13
PRDM4-202ENST00000547188 POLD1P28340 1107 aa34.61■■■■□ 3.13
PRDM4-202ENST00000547188 CARD10Q9BWT7 1032 aa34.61■■■■□ 3.13
PRDM4-202ENST00000547188 ATP10DQ9P241 1426 aa34.61■■■■□ 3.13
PRDM4-202ENST00000547188 COL24A1Q17RW2 1714 aa34.61■■■■□ 3.13
PRDM4-202ENST00000547188 LRRC4BQ9NT99 713 aa34.6■■■■□ 3.13
PRDM4-202ENST00000547188 HSPA6P17066 643 aa34.59■■■■□ 3.13
PRDM4-202ENST00000547188 CPSF1Q10570 1443 aaKnown RBP34.56■■■■□ 3.12
PRDM4-202ENST00000547188 TNS2Q63HR2 1409 aa34.56■■■■□ 3.12
PRDM4-202ENST00000547188 SRPK2P78362 688 aaKnown RBP34.56■■■■□ 3.12
PRDM4-202ENST00000547188 QSER1Q2KHR3 1735 aa34.55■■■■□ 3.12
PRDM4-202ENST00000547188 PIK3C2AO00443 1686 aa34.55■■■■□ 3.12
PRDM4-202ENST00000547188 TUBGCP6Q96RT7 1819 aa34.54■■■■□ 3.12
PRDM4-202ENST00000547188 SLC16A10Q8TF71 515 aa34.54■■■■□ 3.12
PRDM4-202ENST00000547188 CABP2Q9NPB3 220 aa34.54■■■■□ 3.12
PRDM4-202ENST00000547188 USP6P35125 1406 aa34.54■■■■□ 3.12
PRDM4-202ENST00000547188 SOX12O15370 315 aa34.53■■■■□ 3.12
PRDM4-202ENST00000547188 GRIN3BO60391 1043 aa34.53■■■■□ 3.12
PRDM4-202ENST00000547188 AKT1S1Q96B36 256 aa34.53■■■■□ 3.12
PRDM4-202ENST00000547188 BRD4O60885 1362 aaPredicted RBP34.52■■■■□ 3.12
PRDM4-202ENST00000547188 GPBP1L1Q9HC44 474 aaPredicted RBP34.52■■■■□ 3.12
PRDM4-202ENST00000547188 ARHGEF25Q86VW2 580 aa34.51■■■■□ 3.12
PRDM4-202ENST00000547188 PNPLA7Q6ZV29 1317 aa34.51■■■■□ 3.11
PRDM4-202ENST00000547188 TRPM1Q7Z4N2 1603 aa34.5■■■■□ 3.11
PRDM4-202ENST00000547188 ZNF526Q8TF50 670 aaPredicted RBP34.49■■■■□ 3.11
PRDM4-202ENST00000547188 CABP1Q9NZU7 370 aa34.47■■■■□ 3.11
PRDM4-202ENST00000547188 CCDC7Q96M83 1385 aa34.47■■■■□ 3.11
PRDM4-202ENST00000547188 ABCC6O95255 1503 aa34.46■■■■□ 3.11
PRDM4-202ENST00000547188 STAC3Q96MF2 364 aa34.43■■■■□ 3.1
PRDM4-202ENST00000547188 KCNQ4P56696 695 aa34.42■■■■□ 3.1
PRDM4-202ENST00000547188 TFCP2L1Q9NZI6 479 aa34.42■■■■□ 3.1
PRDM4-202ENST00000547188 QRICH2Q9H0J4 1663 aa34.41■■■■□ 3.1
PRDM4-202ENST00000547188 KCNH5Q8NCM2 988 aa34.38■■■■□ 3.09
PRDM4-202ENST00000547188 ADCY9O60503 1353 aa34.36■■■■□ 3.09
PRDM4-202ENST00000547188 SLC27A3Q5K4L6 730 aa34.35■■■■□ 3.09
PRDM4-202ENST00000547188 NBPF1Q3BBV0 1214 aa34.33■■■■□ 3.09
PRDM4-202ENST00000547188 NLRP2Q9NX02 1062 aa34.33■■■■□ 3.09
PRDM4-202ENST00000547188 NFAT5O94916 1531 aa34.33■■■■□ 3.09
PRDM4-202ENST00000547188 IL2RBP14784 551 aa34.32■■■■□ 3.08
PRDM4-202ENST00000547188 CENPJQ9HC77 1338 aaPredicted RBP34.3■■■■□ 3.08
PRDM4-202ENST00000547188 KIAA1210Q9ULL0 1709 aa34.3■■■■□ 3.08
PRDM4-202ENST00000547188 MSH5O43196 834 aa34.3■■■■□ 3.08
PRDM4-202ENST00000547188 TTC21BQ7Z4L5 1316 aa34.3■■■■□ 3.08
PRDM4-202ENST00000547188 MSL1Q68DK7 614 aa34.28■■■■□ 3.08
PRDM4-202ENST00000547188 ERBB3P21860 1342 aa34.24■■■■□ 3.07
PRDM4-202ENST00000547188 KIF3CO14782 793 aa34.23■■■■□ 3.07
PRDM4-202ENST00000547188 COL23A1Q86Y22 540 aaPredicted RBP34.23■■■■□ 3.07
PRDM4-202ENST00000547188 LY75O60449 1722 aa34.23■■■■□ 3.07
PRDM4-202ENST00000547188 CAPN15O75808 1086 aa34.22■■■■□ 3.07
PRDM4-202ENST00000547188 RAB3GAP2Q9H2M9 1393 aa34.22■■■■□ 3.07
PRDM4-202ENST00000547188 DDX54Q8TDD1 881 aaKnown RBP34.21■■■■□ 3.07
PRDM4-202ENST00000547188 SYTL4Q96C24 671 aaPredicted RBP34.21■■■■□ 3.07
PRDM4-202ENST00000547188 WWC3Q9ULE0 1092 aa34.2■■■■□ 3.07
PRDM4-202ENST00000547188 LTN1O94822 1766 aa34.19■■■■□ 3.06
PRDM4-202ENST00000547188 APLP1P51693 650 aa34.19■■■■□ 3.06
PRDM4-202ENST00000547188 DNAJC5GQ8N7S2 189 aa34.19■■■■□ 3.06
PRDM4-202ENST00000547188 DOT1LQ8TEK3 1739 aa34.16■■■■□ 3.06
PRDM4-202ENST00000547188 TTC21AQ8NDW8 1320 aa34.16■■■■□ 3.06
PRDM4-202ENST00000547188 CD2APQ9Y5K6 639 aa34.16■■■■□ 3.06
PRDM4-202ENST00000547188 PRIM1P49642 420 aaKnown RBP34.15■■■■□ 3.06
PRDM4-202ENST00000547188 ZNF692Q9BU19 519 aaPredicted RBP34.15■■■■□ 3.06
PRDM4-202ENST00000547188 COL13A1Q5TAT6 717 aaPredicted RBP34.14■■■■□ 3.06
PRDM4-202ENST00000547188 ANKRD24Q8TF21 1146 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms