RNA–Protein interactions for RNA: ENST00000546850.1

CCT2-204, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-204ENST00000546850 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
CCT2-204ENST00000546850 ITPKCQ96DU7 683 aa10.55□□□□□ -0.72
CCT2-204ENST00000546850 UPP2O95045 317 aa10.54□□□□□ -0.72
CCT2-204ENST00000546850 GRM5P41594 1212 aa10.54□□□□□ -0.72
CCT2-204ENST00000546850 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
CCT2-204ENST00000546850 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CCT2-204ENST00000546850 MAN1A2O60476 641 aa10.52□□□□□ -0.73
CCT2-204ENST00000546850 NR3C2P08235 984 aa10.52□□□□□ -0.73
CCT2-204ENST00000546850 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
CCT2-204ENST00000546850 ERBB4Q15303 1308 aa10.52□□□□□ -0.73
CCT2-204ENST00000546850 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
CCT2-204ENST00000546850 WIZO95785 1651 aa10.5□□□□□ -0.73
CCT2-204ENST00000546850 CFTRP13569 1480 aa10.5□□□□□ -0.73
CCT2-204ENST00000546850 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
CCT2-204ENST00000546850 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
CCT2-204ENST00000546850 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
CCT2-204ENST00000546850 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
CCT2-204ENST00000546850 BMP2P12643 396 aa10.49□□□□□ -0.73
CCT2-204ENST00000546850 VASH1Q7L8A9 365 aaPredicted RBP10.49□□□□□ -0.73
CCT2-204ENST00000546850 C1QTNF2Q9BXJ5 285 aa10.49□□□□□ -0.73
CCT2-204ENST00000546850 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
CCT2-204ENST00000546850 MAP4K5Q9Y4K4 846 aa10.49□□□□□ -0.73
CCT2-204ENST00000546850 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
CCT2-204ENST00000546850 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
CCT2-204ENST00000546850 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
CCT2-204ENST00000546850 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
CCT2-204ENST00000546850 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
CCT2-204ENST00000546850 FSHRP23945 695 aa10.47□□□□□ -0.73
CCT2-204ENST00000546850 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
CCT2-204ENST00000546850 EMILIN1Q9Y6C2 1016 aa10.47□□□□□ -0.73
CCT2-204ENST00000546850 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
CCT2-204ENST00000546850 LORP23490 312 aaPredicted RBP10.46□□□□□ -0.73
CCT2-204ENST00000546850 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
CCT2-204ENST00000546850 POLR3EQ9NVU0 708 aa10.45□□□□□ -0.74
CCT2-204ENST00000546850 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
CCT2-204ENST00000546850 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
CCT2-204ENST00000546850 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
CCT2-204ENST00000546850 CARD14Q9BXL6 1004 aa10.43□□□□□ -0.74
CCT2-204ENST00000546850 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
CCT2-204ENST00000546850 PPFIA3O75145 1194 aa10.41□□□□□ -0.74
CCT2-204ENST00000546850 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
CCT2-204ENST00000546850 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
CCT2-204ENST00000546850 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
CCT2-204ENST00000546850 PGPEP1Q9NXJ5 209 aa10.4□□□□□ -0.74
CCT2-204ENST00000546850 CHD1O14646 1710 aa10.39□□□□□ -0.75
CCT2-204ENST00000546850 AQRO60306 1485 aaKnown RBP eCLIP10.39□□□□□ -0.753e-11■■■□□ 18.3
CCT2-204ENST00000546850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.75
CCT2-204ENST00000546850 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
CCT2-204ENST00000546850 DNMT3LQ9UJW3 386 aa10.39□□□□□ -0.75
CCT2-204ENST00000546850 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
CCT2-204ENST00000546850 TTLL8A6PVC2 850 aa10.37□□□□□ -0.75
CCT2-204ENST00000546850 EIF4G3O43432 1585 aaKnown RBP10.37□□□□□ -0.75
CCT2-204ENST00000546850 PPP1R26Q5T8A7 1209 aaPredicted RBP10.37□□□□□ -0.75
CCT2-204ENST00000546850 ZBTB33Q86T24 672 aa10.37□□□□□ -0.75
CCT2-204ENST00000546850 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
CCT2-204ENST00000546850 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
CCT2-204ENST00000546850 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
CCT2-204ENST00000546850 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
CCT2-204ENST00000546850 SLC10A4Q96EP9 437 aa10.36□□□□□ -0.75
CCT2-204ENST00000546850 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
CCT2-204ENST00000546850 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
CCT2-204ENST00000546850 TOPBP1Q92547 1522 aa10.35□□□□□ -0.75
CCT2-204ENST00000546850 Q6ZVU0 165 aa10.34□□□□□ -0.75
CCT2-204ENST00000546850 LRRN4Q8WUT4 740 aa10.34□□□□□ -0.75
CCT2-204ENST00000546850 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
CCT2-204ENST00000546850 PTK2Q05397 1052 aa10.33□□□□□ -0.76
CCT2-204ENST00000546850 CBLBQ13191 982 aa10.32□□□□□ -0.76
CCT2-204ENST00000546850 SH3D19Q5HYK7 790 aa10.32□□□□□ -0.76
CCT2-204ENST00000546850 FIGNL2A6NMB9 653 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 SPINT1O43278 529 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 PTSQ03393 145 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 NR6A1Q15406 480 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 GPSM3Q9Y4H4 160 aa10.31□□□□□ -0.76
CCT2-204ENST00000546850 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
CCT2-204ENST00000546850 PNMA1Q8ND90 353 aa10.3□□□□□ -0.76
CCT2-204ENST00000546850 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
CCT2-204ENST00000546850 TOP2AP11388 1531 aaKnown RBP10.28□□□□□ -0.76
CCT2-204ENST00000546850 PRDM2Q13029 1718 aa10.28□□□□□ -0.76
CCT2-204ENST00000546850 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
CCT2-204ENST00000546850 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCT2-204ENST00000546850 AP1G2O75843 785 aa10.27□□□□□ -0.77
CCT2-204ENST00000546850 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
CCT2-204ENST00000546850 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
CCT2-204ENST00000546850 CCDC155Q8N6L0 562 aa10.27□□□□□ -0.77
CCT2-204ENST00000546850 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
CCT2-204ENST00000546850 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
CCT2-204ENST00000546850 ADAM32Q8TC27 787 aa10.26□□□□□ -0.77
CCT2-204ENST00000546850 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
CCT2-204ENST00000546850 NANOS1Q8WY41 292 aaKnown RBP10.26□□□□□ -0.77
CCT2-204ENST00000546850 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
CCT2-204ENST00000546850 CLASP1Q7Z460 1538 aa10.25□□□□□ -0.77
CCT2-204ENST00000546850 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
CCT2-204ENST00000546850 CNTNAP3BQ96NU0 1288 aa10.25□□□□□ -0.77
CCT2-204ENST00000546850 CNTNAP3Q9BZ76 1288 aa10.25□□□□□ -0.77
CCT2-204ENST00000546850 CCDC88BA6NC98 1476 aa10.24□□□□□ -0.77
CCT2-204ENST00000546850 DNMBPQ6XZF7 1577 aa10.24□□□□□ -0.77
CCT2-204ENST00000546850 RELBQ01201 579 aa10.24□□□□□ -0.77
CCT2-204ENST00000546850 FBXO31Q5XUX0 539 aaPredicted RBP10.24□□□□□ -0.77
CCT2-204ENST00000546850 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms