RNA–Protein interactions for RNA: ENST00000546850.1

CCT2-204, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-204ENST00000546850 AEBP2Q6ZN18 517 aaPredicted RBP30.33■■■□□ 2.45
CCT2-204ENST00000546850 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
CCT2-204ENST00000546850 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
CCT2-204ENST00000546850 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
CCT2-204ENST00000546850 FOXD1Q16676 465 aa24.15■■□□□ 1.46
CCT2-204ENST00000546850 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
CCT2-204ENST00000546850 MSH5O43196 834 aa22.68■■□□□ 1.22
CCT2-204ENST00000546850 PIAS4Q8N2W9 510 aaPredicted RBP22.62■■□□□ 1.21
CCT2-204ENST00000546850 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
CCT2-204ENST00000546850 ADRA2BP18089 450 aa22.53■■□□□ 1.2
CCT2-204ENST00000546850 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
CCT2-204ENST00000546850 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
CCT2-204ENST00000546850 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
CCT2-204ENST00000546850 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
CCT2-204ENST00000546850 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
CCT2-204ENST00000546850 CNKSR2Q8WXI2 1034 aa19.91■□□□□ 0.78
CCT2-204ENST00000546850 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
CCT2-204ENST00000546850 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
CCT2-204ENST00000546850 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
CCT2-204ENST00000546850 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.72
CCT2-204ENST00000546850 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
CCT2-204ENST00000546850 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
CCT2-204ENST00000546850 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
CCT2-204ENST00000546850 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
CCT2-204ENST00000546850 C1QBPQ07021 282 aaKnown RBP19.07■□□□□ 0.64
CCT2-204ENST00000546850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCT2-204ENST00000546850 KCNA4P22459 653 aa18.84■□□□□ 0.61
CCT2-204ENST00000546850 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
CCT2-204ENST00000546850 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
CCT2-204ENST00000546850 CAPN15O75808 1086 aa18.23■□□□□ 0.51
CCT2-204ENST00000546850 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
CCT2-204ENST00000546850 APLP2Q06481 763 aa18.12■□□□□ 0.49
CCT2-204ENST00000546850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
CCT2-204ENST00000546850 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
CCT2-204ENST00000546850 DSG3P32926 999 aa18.07■□□□□ 0.48
CCT2-204ENST00000546850 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
CCT2-204ENST00000546850 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
CCT2-204ENST00000546850 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
CCT2-204ENST00000546850 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
CCT2-204ENST00000546850 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
CCT2-204ENST00000546850 ABCB7O75027 752 aa17.77■□□□□ 0.44
CCT2-204ENST00000546850 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
CCT2-204ENST00000546850 POLA2Q14181 598 aa17.46■□□□□ 0.39
CCT2-204ENST00000546850 RBM42Q9BTD8 480 aaKnown RBP17.33■□□□□ 0.36
CCT2-204ENST00000546850 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
CCT2-204ENST00000546850 POTEHQ6S545 545 aa17.29■□□□□ 0.36
CCT2-204ENST00000546850 ZBTB22O15209 634 aa17.27■□□□□ 0.36
CCT2-204ENST00000546850 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
CCT2-204ENST00000546850 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
CCT2-204ENST00000546850 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
CCT2-204ENST00000546850 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
CCT2-204ENST00000546850 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
CCT2-204ENST00000546850 FBLN2P98095 1184 aa16.76■□□□□ 0.27
CCT2-204ENST00000546850 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
CCT2-204ENST00000546850 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
CCT2-204ENST00000546850 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
CCT2-204ENST00000546850 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
CCT2-204ENST00000546850 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
CCT2-204ENST00000546850 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
CCT2-204ENST00000546850 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
CCT2-204ENST00000546850 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
CCT2-204ENST00000546850 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
CCT2-204ENST00000546850 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCT2-204ENST00000546850 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
CCT2-204ENST00000546850 SSUH2Q9Y2M2 353 aa16.34■□□□□ 0.21
CCT2-204ENST00000546850 SPDYE1Q8NFV5 336 aaPredicted RBP16.33■□□□□ 0.2
CCT2-204ENST00000546850 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
CCT2-204ENST00000546850 SP7Q8TDD2 431 aaPredicted RBP16.22■□□□□ 0.19
CCT2-204ENST00000546850 HAX1O00165 279 aa16.21■□□□□ 0.19
CCT2-204ENST00000546850 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCT2-204ENST00000546850 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
CCT2-204ENST00000546850 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
CCT2-204ENST00000546850 EVX2Q03828 476 aa15.91■□□□□ 0.14
CCT2-204ENST00000546850 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
CCT2-204ENST00000546850 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
CCT2-204ENST00000546850 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
CCT2-204ENST00000546850 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
CCT2-204ENST00000546850 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
CCT2-204ENST00000546850 GABBR2O75899 941 aa15.62■□□□□ 0.09
CCT2-204ENST00000546850 CD44P16070 742 aaKnown RBP15.61■□□□□ 0.09
CCT2-204ENST00000546850 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
CCT2-204ENST00000546850 CLCN6P51797 869 aa15.49■□□□□ 0.07
CCT2-204ENST00000546850 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
CCT2-204ENST00000546850 PROM2Q8N271 834 aa15.39■□□□□ 0.05
CCT2-204ENST00000546850 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCT2-204ENST00000546850 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
CCT2-204ENST00000546850 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
CCT2-204ENST00000546850 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
CCT2-204ENST00000546850 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
CCT2-204ENST00000546850 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
CCT2-204ENST00000546850 LHX8Q68G74 356 aa15.23■□□□□ 0.03
CCT2-204ENST00000546850 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
CCT2-204ENST00000546850 GALR2O43603 387 aaPredicted RBP15.15■□□□□ 0.02
CCT2-204ENST00000546850 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
CCT2-204ENST00000546850 MIER1Q8N108 512 aa15.13■□□□□ 0.01
CCT2-204ENST00000546850 FKBP8Q14318 412 aa15.04■□□□□ -0
CCT2-204ENST00000546850 TSPYL2Q9H2G4 693 aaPredicted RBP15.04■□□□□ -0
CCT2-204ENST00000546850 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
CCT2-204ENST00000546850 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
CCT2-204ENST00000546850 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms