RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 LTN1O94822 1766 aa26.26■■□□□ 1.79
GPN3-204ENST00000546592 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
GPN3-204ENST00000546592 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
GPN3-204ENST00000546592 CAMTA1Q9Y6Y1 1673 aa26.25■■□□□ 1.79
GPN3-204ENST00000546592 IP6K1Q92551 441 aa26.25■■□□□ 1.79
GPN3-204ENST00000546592 STRN4Q9NRL3 753 aa26.25■■□□□ 1.79
GPN3-204ENST00000546592 RTL1A6NKG5 1358 aa26.24■■□□□ 1.79
GPN3-204ENST00000546592 KIF24Q5T7B8 1368 aa26.24■■□□□ 1.79
GPN3-204ENST00000546592 VPS72Q15906 364 aa26.24■■□□□ 1.79
GPN3-204ENST00000546592 AXIN2Q9Y2T1 843 aa26.24■■□□□ 1.79
GPN3-204ENST00000546592 CCDC9Q9Y3X0 531 aaKnown RBP26.24■■□□□ 1.79
GPN3-204ENST00000546592 ATRNO75882 1429 aa26.23■■□□□ 1.79
GPN3-204ENST00000546592 COL18A1P39060 1754 aa26.23■■□□□ 1.79
GPN3-204ENST00000546592 NRAPQ86VF7 1730 aa26.22■■□□□ 1.79
GPN3-204ENST00000546592 POTEAQ6S8J7 498 aa26.22■■□□□ 1.79
GPN3-204ENST00000546592 COL5A2P05997 1499 aaPredicted RBP26.22■■□□□ 1.79
GPN3-204ENST00000546592 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
GPN3-204ENST00000546592 PPM1GO15355 546 aaPredicted RBP26.21■■□□□ 1.79
GPN3-204ENST00000546592 HOXC9P31274 260 aa26.21■■□□□ 1.79
GPN3-204ENST00000546592 POLKQ9UBT6 870 aa26.21■■□□□ 1.79
GPN3-204ENST00000546592 CSB-PGBD3P0DP91 1061 aa26.2■■□□□ 1.78
GPN3-204ENST00000546592 EMILIN1Q9Y6C2 1016 aa26.2■■□□□ 1.78
GPN3-204ENST00000546592 FLT4P35916 1363 aa26.2■■□□□ 1.78
GPN3-204ENST00000546592 RXRBP28702 533 aa26.19■■□□□ 1.78
GPN3-204ENST00000546592 RBM6P78332 1123 aaKnown RBP26.19■■□□□ 1.78
GPN3-204ENST00000546592 GJD4Q96KN9 370 aaPredicted RBP26.19■■□□□ 1.78
GPN3-204ENST00000546592 WDR17Q8IZU2 1322 aa26.17■■□□□ 1.78
GPN3-204ENST00000546592 LARP1Q6PKG0 1096 aaKnown RBP26.17■■□□□ 1.78
GPN3-204ENST00000546592 ANKRD24Q8TF21 1146 aa26.17■■□□□ 1.78
GPN3-204ENST00000546592 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
GPN3-204ENST00000546592 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
GPN3-204ENST00000546592 ERBB3P21860 1342 aa26.15■■□□□ 1.78
GPN3-204ENST00000546592 SPATA31A5Q5VU36 1347 aa26.15■■□□□ 1.78
GPN3-204ENST00000546592 SPATA31A7Q8IWB4 1347 aa26.15■■□□□ 1.78
GPN3-204ENST00000546592 RGPD5Q99666 1765 aa26.15■■□□□ 1.78
GPN3-204ENST00000546592 INSRP06213 1382 aa26.15■■□□□ 1.78
GPN3-204ENST00000546592 CRB1P82279 1406 aa26.14■■□□□ 1.78
GPN3-204ENST00000546592 LTV1Q96GA3 475 aaPredicted RBP26.14■■□□□ 1.78
GPN3-204ENST00000546592 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
GPN3-204ENST00000546592 HSP90AB2PQ58FF8 381 aa26.13■■□□□ 1.77
GPN3-204ENST00000546592 SPATA31A1Q5TZJ5 1347 aa26.13■■□□□ 1.77
GPN3-204ENST00000546592 PEAK1Q9H792 1746 aa26.12■■□□□ 1.77
GPN3-204ENST00000546592 USP35Q9P2H5 1018 aa26.11■■□□□ 1.77
GPN3-204ENST00000546592 MTHFSP49914 203 aa26.1■■□□□ 1.77
GPN3-204ENST00000546592 TCP11L2Q8N4U5 519 aa26.1■■□□□ 1.77
GPN3-204ENST00000546592 CARD10Q9BWT7 1032 aa26.1■■□□□ 1.77
GPN3-204ENST00000546592 NLRP2Q9NX02 1062 aa26.1■■□□□ 1.77
GPN3-204ENST00000546592 THRAP3Q9Y2W1 955 aaKnown RBP26.1■■□□□ 1.77
GPN3-204ENST00000546592 RALBP1Q15311 655 aa26.09■■□□□ 1.77
GPN3-204ENST00000546592 CDK12Q9NYV4 1490 aaPredicted RBP26.09■■□□□ 1.77
GPN3-204ENST00000546592 PARD3Q8TEW0 1356 aa26.08■■□□□ 1.77
GPN3-204ENST00000546592 GLI3P10071 1580 aa26.08■■□□□ 1.77
GPN3-204ENST00000546592 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
GPN3-204ENST00000546592 PPP2R1AP30153 589 aa26.06■■□□□ 1.76
GPN3-204ENST00000546592 FAM98CQ17RN3 349 aaKnown RBP26.06■■□□□ 1.76
GPN3-204ENST00000546592 BARGINQ6ZT62 677 aa26.05■■□□□ 1.76
GPN3-204ENST00000546592 A0A0G2JS52 829 aa26.04■■□□□ 1.76
GPN3-204ENST00000546592 MYT1Q01538 1121 aa26.04■■□□□ 1.76
GPN3-204ENST00000546592 ONECUT3O60422 494 aaPredicted RBP26.03■■□□□ 1.76
GPN3-204ENST00000546592 CFAP53Q96M91 514 aa26.03■■□□□ 1.76
GPN3-204ENST00000546592 EIF4A2Q14240 407 aaKnown RBP26.02■■□□□ 1.76
GPN3-204ENST00000546592 CDCA7Q9BWT1 371 aaPredicted RBP26.01■■□□□ 1.75
GPN3-204ENST00000546592 NBPF6Q5VWK0 638 aa26■■□□□ 1.75
GPN3-204ENST00000546592 SEPT12Q8IYM1 358 aa26■■□□□ 1.75
GPN3-204ENST00000546592 NBPF4Q96M43 638 aa26■■□□□ 1.75
GPN3-204ENST00000546592 RGS12O14924 1447 aa25.99■■□□□ 1.75
GPN3-204ENST00000546592 PRKRIP1Q9H875 184 aaPredicted RBP25.99■■□□□ 1.75
GPN3-204ENST00000546592 MYBBP1AQ9BQG0 1328 aaKnown RBP25.97■■□□□ 1.75
GPN3-204ENST00000546592 DIAPH1O60610 1272 aaKnown RBP25.97■■□□□ 1.75
GPN3-204ENST00000546592 ANP32CO43423 234 aa25.96■■□□□ 1.75
GPN3-204ENST00000546592 IL2RBP14784 551 aa25.96■■□□□ 1.75
GPN3-204ENST00000546592 EYA1Q99502 592 aa25.96■■□□□ 1.75
GPN3-204ENST00000546592 IL13P35225 146 aa25.95■■□□□ 1.74
GPN3-204ENST00000546592 ILDR2Q71H61 639 aa25.94■■□□□ 1.74
GPN3-204ENST00000546592 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
GPN3-204ENST00000546592 THSD7AQ9UPZ6 1657 aa25.93■■□□□ 1.74
GPN3-204ENST00000546592 RGPD2P0DJD1 1756 aa25.93■■□□□ 1.74
GPN3-204ENST00000546592 RAPGEF4Q8WZA2 1011 aa25.93■■□□□ 1.74
GPN3-204ENST00000546592 DISP2A7MBM2 1401 aa25.92■■□□□ 1.74
GPN3-204ENST00000546592 IGSF1Q8N6C5 1336 aa25.91■■□□□ 1.74
GPN3-204ENST00000546592 DDB1Q16531 1140 aa25.91■■□□□ 1.74
GPN3-204ENST00000546592 NUDCQ9Y266 331 aa25.91■■□□□ 1.74
GPN3-204ENST00000546592 PDE3BQ13370 1112 aa25.9■■□□□ 1.74
GPN3-204ENST00000546592 WNK3Q9BYP7 1800 aa25.9■■□□□ 1.74
GPN3-204ENST00000546592 COL3A1P02461 1466 aaPredicted RBP25.9■■□□□ 1.74
GPN3-204ENST00000546592 NCAPD2Q15021 1401 aa25.89■■□□□ 1.74
GPN3-204ENST00000546592 EXOC5O00471 708 aa25.89■■□□□ 1.74
GPN3-204ENST00000546592 TATP17735 454 aaPredicted RBP25.89■■□□□ 1.74
GPN3-204ENST00000546592 KRT27Q7Z3Y8 459 aa25.89■■□□□ 1.74
GPN3-204ENST00000546592 PARP4Q9UKK3 1724 aaKnown RBP25.88■■□□□ 1.73
GPN3-204ENST00000546592 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
GPN3-204ENST00000546592 SULT6B1Q6IMI4 303 aa25.86■■□□□ 1.73
GPN3-204ENST00000546592 LRRC37A3O60309 1634 aa25.84■■□□□ 1.73
GPN3-204ENST00000546592 BRWD3Q6RI45 1802 aa25.84■■□□□ 1.73
GPN3-204ENST00000546592 MEGF6O75095 1541 aa25.83■■□□□ 1.73
GPN3-204ENST00000546592 RGPD1P0DJD0 1748 aa25.83■■□□□ 1.73
GPN3-204ENST00000546592 OVOS2A0A0G2JMS6 1433 aa25.83■■□□□ 1.73
GPN3-204ENST00000546592 TNS2Q63HR2 1409 aa25.83■■□□□ 1.73
GPN3-204ENST00000546592 ZCRB1Q8TBF4 217 aaKnown RBP25.83■■□□□ 1.73
GPN3-204ENST00000546592 KDRP35968 1356 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms