RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
TRDN-205ENST00000546248 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRDN-205ENST00000546248 BMP2P12643 396 aa9.64□□□□□ -0.87
TRDN-205ENST00000546248 CCDC116Q8IYX3 515 aa9.64□□□□□ -0.87
TRDN-205ENST00000546248 MAN1A2O60476 641 aa9.63□□□□□ -0.87
TRDN-205ENST00000546248 NR6A1Q15406 480 aa9.63□□□□□ -0.87
TRDN-205ENST00000546248 FKBPLQ9UIM3 349 aa9.63□□□□□ -0.87
TRDN-205ENST00000546248 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
TRDN-205ENST00000546248 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
TRDN-205ENST00000546248 ARHGAP9Q9BRR9 750 aa9.62□□□□□ -0.87
TRDN-205ENST00000546248 EMILIN1Q9Y6C2 1016 aa9.62□□□□□ -0.87
TRDN-205ENST00000546248 SOS2Q07890 1332 aaPredicted RBP9.61□□□□□ -0.87
TRDN-205ENST00000546248 UPP2O95045 317 aa9.61□□□□□ -0.87
TRDN-205ENST00000546248 ZSCAN1Q8NBB4 408 aa9.61□□□□□ -0.87
TRDN-205ENST00000546248 OCSTAMPQ9BR26 566 aa9.61□□□□□ -0.87
TRDN-205ENST00000546248 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
TRDN-205ENST00000546248 VSIG8P0DPA2 414 aa9.6□□□□□ -0.87
TRDN-205ENST00000546248 PPP1R26Q5T8A7 1209 aaPredicted RBP9.6□□□□□ -0.87
TRDN-205ENST00000546248 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
TRDN-205ENST00000546248 CBLBQ13191 982 aa9.59□□□□□ -0.87
TRDN-205ENST00000546248 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
TRDN-205ENST00000546248 AP1G2O75843 785 aa9.58□□□□□ -0.88
TRDN-205ENST00000546248 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
TRDN-205ENST00000546248 TSEN34Q9BSV6 310 aaKnown RBP9.58□□□□□ -0.88
TRDN-205ENST00000546248 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
TRDN-205ENST00000546248 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
TRDN-205ENST00000546248 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
TRDN-205ENST00000546248 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
TRDN-205ENST00000546248 Q6ZVU0 165 aa9.56□□□□□ -0.88
TRDN-205ENST00000546248 ZBTB33Q86T24 672 aa9.56□□□□□ -0.88
TRDN-205ENST00000546248 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
TRDN-205ENST00000546248 INTS6LQ5JSJ4 861 aaKnown RBP9.55□□□□□ -0.88
TRDN-205ENST00000546248 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
TRDN-205ENST00000546248 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
TRDN-205ENST00000546248 TTLL8A6PVC2 850 aa9.54□□□□□ -0.88
TRDN-205ENST00000546248 ADAM32Q8TC27 787 aa9.54□□□□□ -0.88
TRDN-205ENST00000546248 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
TRDN-205ENST00000546248 ABCC9O60706 1549 aa9.53□□□□□ -0.88
TRDN-205ENST00000546248 FIGNL2A6NMB9 653 aa9.53□□□□□ -0.88
TRDN-205ENST00000546248 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
TRDN-205ENST00000546248 PTK2Q05397 1052 aa9.53□□□□□ -0.88
TRDN-205ENST00000546248 MYO15BQ96JP2 1530 aa9.52□□□□□ -0.88
TRDN-205ENST00000546248 SPINT1O43278 529 aa9.52□□□□□ -0.89
TRDN-205ENST00000546248 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
TRDN-205ENST00000546248 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
TRDN-205ENST00000546248 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
TRDN-205ENST00000546248 RFC5P40937 340 aa9.51□□□□□ -0.89
TRDN-205ENST00000546248 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
TRDN-205ENST00000546248 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
TRDN-205ENST00000546248 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
TRDN-205ENST00000546248 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
TRDN-205ENST00000546248 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
TRDN-205ENST00000546248 PTSQ03393 145 aa9.5□□□□□ -0.89
TRDN-205ENST00000546248 TMPRSS4Q9NRS4 437 aa9.5□□□□□ -0.89
TRDN-205ENST00000546248 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
TRDN-205ENST00000546248 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
TRDN-205ENST00000546248 RELBQ01201 579 aa9.48□□□□□ -0.89
TRDN-205ENST00000546248 RAB15P59190 212 aa9.47□□□□□ -0.89
TRDN-205ENST00000546248 KRT76Q01546 638 aa9.47□□□□□ -0.89
TRDN-205ENST00000546248 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
TRDN-205ENST00000546248 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
TRDN-205ENST00000546248 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
TRDN-205ENST00000546248 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
TRDN-205ENST00000546248 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
TRDN-205ENST00000546248 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
TRDN-205ENST00000546248 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
TRDN-205ENST00000546248 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
TRDN-205ENST00000546248 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
TRDN-205ENST00000546248 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
TRDN-205ENST00000546248 ERVH48-1M5A8F1 160 aa9.44□□□□□ -0.9
TRDN-205ENST00000546248 LILRA1O75019 489 aa9.44□□□□□ -0.9
TRDN-205ENST00000546248 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
TRDN-205ENST00000546248 ESPNB1AK53 854 aa9.43□□□□□ -0.9
TRDN-205ENST00000546248 KDF1Q8NAX2 398 aaPredicted RBP9.43□□□□□ -0.9
TRDN-205ENST00000546248 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
TRDN-205ENST00000546248 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
TRDN-205ENST00000546248 POLMQ9NP87 494 aaPredicted RBP9.43□□□□□ -0.9
TRDN-205ENST00000546248 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
TRDN-205ENST00000546248 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
TRDN-205ENST00000546248 CNTNAP3BQ96NU0 1288 aa9.42□□□□□ -0.9
TRDN-205ENST00000546248 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
TRDN-205ENST00000546248 ADH1AP07327 375 aa9.41□□□□□ -0.9
TRDN-205ENST00000546248 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
TRDN-205ENST00000546248 GJD4Q96KN9 370 aaPredicted RBP9.4□□□□□ -0.9
TRDN-205ENST00000546248 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
TRDN-205ENST00000546248 NACADO15069 1562 aa9.4□□□□□ -0.9
TRDN-205ENST00000546248 ITGA6P23229 1130 aa9.39□□□□□ -0.91
TRDN-205ENST00000546248 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
TRDN-205ENST00000546248 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
TRDN-205ENST00000546248 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
TRDN-205ENST00000546248 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
TRDN-205ENST00000546248 PTGIRP43119 386 aa9.38□□□□□ -0.91
TRDN-205ENST00000546248 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
TRDN-205ENST00000546248 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
TRDN-205ENST00000546248 VWA5B2Q8N398 1253 aa9.37□□□□□ -0.91
TRDN-205ENST00000546248 CDC14CA4D256 554 aa9.36□□□□□ -0.91
TRDN-205ENST00000546248 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
TRDN-205ENST00000546248 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
TRDN-205ENST00000546248 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
TRDN-205ENST00000546248 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms