RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 KIF14Q15058 1648 aa13.88□□□□□ -0.19
CIT-217ENST00000545913 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
CIT-217ENST00000545913 FIBPO43427 364 aa13.88□□□□□ -0.19
CIT-217ENST00000545913 PDIA4P13667 645 aaKnown RBP13.88□□□□□ -0.19
CIT-217ENST00000545913 CDKL5O76039 1030 aa13.88□□□□□ -0.19
CIT-217ENST00000545913 PRPF40AO75400 957 aaKnown RBP13.87□□□□□ -0.19
CIT-217ENST00000545913 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
CIT-217ENST00000545913 ZRSR2Q15696 482 aaKnown RBP13.87□□□□□ -0.19
CIT-217ENST00000545913 GOLGA6L10A6NI86 522 aa13.87□□□□□ -0.19
CIT-217ENST00000545913 EXOSC9Q06265 439 aaKnown RBP13.87□□□□□ -0.19
CIT-217ENST00000545913 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
CIT-217ENST00000545913 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
CIT-217ENST00000545913 BRPF1P55201 1214 aaPredicted RBP13.87□□□□□ -0.19
CIT-217ENST00000545913 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
CIT-217ENST00000545913 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 CABP4P57796 275 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 KRT85P78386 507 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 SERPINC1P01008 464 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 CCDC66A2RUB6 948 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 CALRP27797 417 aaKnown RBP13.86□□□□□ -0.19
CIT-217ENST00000545913 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
CIT-217ENST00000545913 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
CIT-217ENST00000545913 ME1P48163 572 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 PPFIBP1Q86W92 1011 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
CIT-217ENST00000545913 CDK19Q9BWU1 502 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 THEMISQ8N1K5 641 aaPredicted RBP13.85□□□□□ -0.19
CIT-217ENST00000545913 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
CIT-217ENST00000545913 CEBPZQ03701 1054 aaKnown RBP13.85□□□□□ -0.19
CIT-217ENST00000545913 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
CIT-217ENST00000545913 EPRSP07814 1512 aaKnown RBP13.85□□□□□ -0.19
CIT-217ENST00000545913 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 LEKR1Q6ZMV7 388 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 K7ELQ4 463 aaPredicted RBP13.84□□□□□ -0.19
CIT-217ENST00000545913 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 KDM4AO75164 1064 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 RTEL1-TNFRSF6BF6WH68 1400 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 FAM177BA6PVY3 158 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
CIT-217ENST00000545913 DEF6Q9H4E7 631 aa13.83□□□□□ -0.19
CIT-217ENST00000545913 WDR97A6NE52 1622 aa13.83□□□□□ -0.19
CIT-217ENST00000545913 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 CBFA2T2O43439 604 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 NOL7Q9UMY1 257 aaKnown RBP13.83□□□□□ -0.2
CIT-217ENST00000545913 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
CIT-217ENST00000545913 IQCEQ6IPM2 695 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 AFAP1Q8N556 730 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 KRT32Q14532 448 aa13.83□□□□□ -0.2
CIT-217ENST00000545913 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
CIT-217ENST00000545913 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
CIT-217ENST00000545913 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 ANKRD18AQ8IVF6 992 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 DAPK1P53355 1430 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
CIT-217ENST00000545913 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
CIT-217ENST00000545913 IQGAP2Q13576 1575 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
CIT-217ENST00000545913 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 SEPT7Q16181 437 aaKnown RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 PAF1Q8N7H5 531 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 TOM1L2Q6ZVM7 507 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 SIL1Q9H173 461 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 SOGA3Q5TF21 947 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
CIT-217ENST00000545913 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 ANKRD30BQ9BXX2 1392 aa13.81□□□□□ -0.2
CIT-217ENST00000545913 MYL6BP14649 208 aa13.8□□□□□ -0.2
CIT-217ENST00000545913 BTBD11A6QL63 1104 aa13.8□□□□□ -0.2
CIT-217ENST00000545913 NEFHP12036 1026 aa13.8□□□□□ -0.2
CIT-217ENST00000545913 FKBP4Q02790 459 aaKnown RBP eCLIP13.8□□□□□ -0.2
CIT-217ENST00000545913 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
CIT-217ENST00000545913 STK3Q13188 491 aa13.79□□□□□ -0.2
CIT-217ENST00000545913 AACSQ86V21 672 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms