RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 SPECC1LQ69YQ0 1117 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 TAF4BQ92750 862 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 SWAP70Q9UH65 585 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 AKNAQ7Z591 1439 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-216ENST00000545170 GCOM1H8Y6P7 765 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-216ENST00000545170 MYZAPP0CAP1 466 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 CEP83Q9Y592 693 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 ERC2O15083 957 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 STAMBPO95630 424 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 LIG1P18858 919 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 KRBA2Q6ZNG9 492 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 SPATA32Q96LK8 384 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
ATXN3-216ENST00000545170 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 FHAD1B1AJZ9 1412 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 CFAP100Q494V2 611 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 CNTROBQ8N137 903 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 CCDC6Q16204 474 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 CCDC183Q5T5S1 534 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
ATXN3-216ENST00000545170 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
ATXN3-216ENST00000545170 XBP1P17861 261 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 FAM114A1Q8IWE2 563 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
ATXN3-216ENST00000545170 CAPN2P17655 700 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 NAP1L3Q99457 506 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-216ENST00000545170 NEBLO76041 1014 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 ADCY5O95622 1261 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 SNW1Q13573 536 aaKnown RBP10.12□□□□□ -0.79
ATXN3-216ENST00000545170 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 KANK1Q14678 1352 aa10.12□□□□□ -0.79
ATXN3-216ENST00000545170 GOLIM4O00461 696 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 STK3Q13188 491 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 OGFRQ9NZT2 677 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 AMOTL1Q8IY63 956 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 KIF5BP33176 963 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 C6orf163Q5TEZ5 329 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 C9orf78Q9NZ63 289 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-216ENST00000545170 KIF20AO95235 890 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 A0A1B0GUA9 196 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 MAATS1Q7Z4T9 603 aa10.11□□□□□ -0.79
ATXN3-216ENST00000545170 CLNS1AP54105 237 aaKnown RBP10.1□□□□□ -0.79
ATXN3-216ENST00000545170 MRVI1Q9Y6F6 885 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 HSF2BPO75031 334 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 CCDC178Q5BJE1 867 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 G3V3G9 751 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 STIM1Q13586 685 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
ATXN3-216ENST00000545170 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATXN3-216ENST00000545170 MIPOL1Q8TD10 442 aa10.1□□□□□ -0.79
ATXN3-216ENST00000545170 SEPT11Q9NVA2 429 aaKnown RBP10.1□□□□□ -0.79
ATXN3-216ENST00000545170 LARP1BQ659C4 914 aaKnown RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 CCDC121Q6ZUS5 278 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 JMYQ8N9B5 988 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 FBF1Q8TES7 1133 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 KIF4AO95239 1232 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 ZNF830Q96NB3 372 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 TMX4Q9H1E5 349 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 VPS18Q9P253 973 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 MYCBPQ99417 103 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 IMMTQ16891 758 aaKnown RBP10.09□□□□□ -0.79
ATXN3-216ENST00000545170 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
ATXN3-216ENST00000545170 NEMFO60524 1076 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 NOLC1Q14978 699 aaKnown RBP eCLIP10.08□□□□□ -0.8
ATXN3-216ENST00000545170 KIF3CO14782 793 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 KIF3BO15066 747 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
ATXN3-216ENST00000545170 SPECC1Q5M775 1068 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 CEP112Q8N8E3 955 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 TCHPQ9BT92 498 aa10.08□□□□□ -0.8
ATXN3-216ENST00000545170 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-216ENST00000545170 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-216ENST00000545170 EIF5P55010 431 aaKnown RBP10.07□□□□□ -0.8
ATXN3-216ENST00000545170 SPA17Q15506 151 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 TERF2IPQ9NYB0 399 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 CERS3Q8IU89 383 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 RNF168Q8IYW5 571 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-216ENST00000545170 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
ATXN3-216ENST00000545170 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-216ENST00000545170 EBAG9O00559 213 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 MCM6Q14566 821 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 NBPF11Q86T75 865 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 TNPO1Q92973 898 aaKnown RBP10.07□□□□□ -0.8
ATXN3-216ENST00000545170 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms