RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
SSPN-208ENST00000544231 PPP2R1AP30153 589 aa19.74■□□□□ 0.75
SSPN-208ENST00000544231 HOXC9P31274 260 aa19.73■□□□□ 0.75
SSPN-208ENST00000544231 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
SSPN-208ENST00000544231 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
SSPN-208ENST00000544231 MTHFSP49914 203 aa19.72■□□□□ 0.75
SSPN-208ENST00000544231 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
SSPN-208ENST00000544231 CFAP53Q96M91 514 aa19.72■□□□□ 0.75
SSPN-208ENST00000544231 BTG4Q9NY30 223 aa19.72■□□□□ 0.75
SSPN-208ENST00000544231 SLIT2O94813 1529 aa19.71■□□□□ 0.75
SSPN-208ENST00000544231 INSRP06213 1382 aa19.7■□□□□ 0.74
SSPN-208ENST00000544231 EVA1CP58658 441 aa19.7■□□□□ 0.74
SSPN-208ENST00000544231 LMO7Q8WWI1 1683 aa19.7■□□□□ 0.74
SSPN-208ENST00000544231 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
SSPN-208ENST00000544231 PLCH1Q4KWH8 1693 aa19.69■□□□□ 0.74
SSPN-208ENST00000544231 COL18A1P39060 1754 aa19.69■□□□□ 0.74
SSPN-208ENST00000544231 AFF2P51816 1311 aa19.69■□□□□ 0.74
SSPN-208ENST00000544231 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
SSPN-208ENST00000544231 USP21Q9UK80 565 aa19.68■□□□□ 0.74
SSPN-208ENST00000544231 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
SSPN-208ENST00000544231 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
SSPN-208ENST00000544231 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
SSPN-208ENST00000544231 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
SSPN-208ENST00000544231 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
SSPN-208ENST00000544231 HSP90AB2PQ58FF8 381 aa19.67■□□□□ 0.74
SSPN-208ENST00000544231 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
SSPN-208ENST00000544231 ANKRD24Q8TF21 1146 aa19.67■□□□□ 0.74
SSPN-208ENST00000544231 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
SSPN-208ENST00000544231 ERBB3P21860 1342 aa19.67■□□□□ 0.74
SSPN-208ENST00000544231 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
SSPN-208ENST00000544231 WDR17Q8IZU2 1322 aa19.65■□□□□ 0.74
SSPN-208ENST00000544231 LTV1Q96GA3 475 aaPredicted RBP19.64■□□□□ 0.73
SSPN-208ENST00000544231 BCL9LQ86UU0 1499 aa19.64■□□□□ 0.73
SSPN-208ENST00000544231 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.63■□□□□ 0.73
SSPN-208ENST00000544231 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
SSPN-208ENST00000544231 TOM1L2Q6ZVM7 507 aa19.63■□□□□ 0.73
SSPN-208ENST00000544231 TRPC5Q9UL62 973 aaPredicted RBP19.63■□□□□ 0.73
SSPN-208ENST00000544231 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
SSPN-208ENST00000544231 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
SSPN-208ENST00000544231 VPS72Q15906 364 aa19.62■□□□□ 0.73
SSPN-208ENST00000544231 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
SSPN-208ENST00000544231 CRB1P82279 1406 aa19.61■□□□□ 0.73
SSPN-208ENST00000544231 NLRP2Q9NX02 1062 aa19.61■□□□□ 0.73
SSPN-208ENST00000544231 CCDC9Q9Y3X0 531 aaKnown RBP19.61■□□□□ 0.73
SSPN-208ENST00000544231 RGPD5Q99666 1765 aa19.61■□□□□ 0.73
SSPN-208ENST00000544231 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
SSPN-208ENST00000544231 LARP1Q6PKG0 1096 aaKnown RBP19.6■□□□□ 0.73
SSPN-208ENST00000544231 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
SSPN-208ENST00000544231 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
SSPN-208ENST00000544231 ATRNO75882 1429 aa19.59■□□□□ 0.73
SSPN-208ENST00000544231 IL13P35225 146 aa19.58■□□□□ 0.72
SSPN-208ENST00000544231 QTRT2Q9H974 415 aaKnown RBP19.58■□□□□ 0.72
SSPN-208ENST00000544231 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
SSPN-208ENST00000544231 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
SSPN-208ENST00000544231 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
SSPN-208ENST00000544231 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
SSPN-208ENST00000544231 CCER2I3L3R5 266 aa19.55■□□□□ 0.72
SSPN-208ENST00000544231 U2SURPO15042 1029 aaKnown RBP19.55■□□□□ 0.72
SSPN-208ENST00000544231 TCP11L2Q8N4U5 519 aa19.55■□□□□ 0.72
SSPN-208ENST00000544231 GJD4Q96KN9 370 aaPredicted RBP19.55■□□□□ 0.72
SSPN-208ENST00000544231 EYA1Q99502 592 aa19.55■□□□□ 0.72
SSPN-208ENST00000544231 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
SSPN-208ENST00000544231 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
SSPN-208ENST00000544231 NBPF6Q5VWK0 638 aa19.54■□□□□ 0.72
SSPN-208ENST00000544231 NBPF4Q96M43 638 aa19.54■□□□□ 0.72
SSPN-208ENST00000544231 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
SSPN-208ENST00000544231 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSPN-208ENST00000544231 CDCA7Q9BWT1 371 aaPredicted RBP19.53■□□□□ 0.72
SSPN-208ENST00000544231 RBM6P78332 1123 aaKnown RBP19.52■□□□□ 0.72
SSPN-208ENST00000544231 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
SSPN-208ENST00000544231 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
SSPN-208ENST00000544231 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSPN-208ENST00000544231 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
SSPN-208ENST00000544231 MIER1Q8N108 512 aa19.51■□□□□ 0.71
SSPN-208ENST00000544231 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
SSPN-208ENST00000544231 RGS17Q9UGC6 210 aaPredicted RBP19.51■□□□□ 0.71
SSPN-208ENST00000544231 RXRBP28702 533 aa19.5■□□□□ 0.71
SSPN-208ENST00000544231 SULT6B1Q6IMI4 303 aa19.5■□□□□ 0.71
SSPN-208ENST00000544231 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
SSPN-208ENST00000544231 KDRP35968 1356 aa19.49■□□□□ 0.71
SSPN-208ENST00000544231 RGPD1P0DJD0 1748 aa19.49■□□□□ 0.71
SSPN-208ENST00000544231 IL2RBP14784 551 aa19.49■□□□□ 0.71
SSPN-208ENST00000544231 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
SSPN-208ENST00000544231 PLEKHG2Q9H7P9 1386 aa19.48■□□□□ 0.71
SSPN-208ENST00000544231 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
SSPN-208ENST00000544231 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
SSPN-208ENST00000544231 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
SSPN-208ENST00000544231 GLI3P10071 1580 aa19.47■□□□□ 0.71
SSPN-208ENST00000544231 A0A0G2JS52 829 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 FCHSD2O94868 740 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 NEFMP07197 916 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 HMOX1P09601 288 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 MYT1Q01538 1121 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
SSPN-208ENST00000544231 DISP2A7MBM2 1401 aa19.45■□□□□ 0.7
SSPN-208ENST00000544231 AEBP1Q8IUX7 1158 aa19.45■□□□□ 0.7
SSPN-208ENST00000544231 ONECUT3O60422 494 aaPredicted RBP19.44■□□□□ 0.7
SSPN-208ENST00000544231 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
SSPN-208ENST00000544231 RSPH6AQ9H0K4 717 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms