RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
CELF1-221ENST00000543178 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
CELF1-221ENST00000543178 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
CELF1-221ENST00000543178 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
CELF1-221ENST00000543178 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
CELF1-221ENST00000543178 EVA1CP58658 441 aa13.05□□□□□ -0.32
CELF1-221ENST00000543178 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
CELF1-221ENST00000543178 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
CELF1-221ENST00000543178 RGS12O14924 1447 aa13.05□□□□□ -0.32
CELF1-221ENST00000543178 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
CELF1-221ENST00000543178 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
CELF1-221ENST00000543178 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
CELF1-221ENST00000543178 CRB1P82279 1406 aa13.04□□□□□ -0.32
CELF1-221ENST00000543178 SOCS7O14512 581 aa13.03□□□□□ -0.32
CELF1-221ENST00000543178 SOX12O15370 315 aa13.03□□□□□ -0.32
CELF1-221ENST00000543178 IP6K1Q92551 441 aa13.03□□□□□ -0.32
CELF1-221ENST00000543178 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
CELF1-221ENST00000543178 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
CELF1-221ENST00000543178 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
CELF1-221ENST00000543178 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
CELF1-221ENST00000543178 THSD7AQ9UPZ6 1657 aa13.02□□□□□ -0.32
CELF1-221ENST00000543178 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
CELF1-221ENST00000543178 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
CELF1-221ENST00000543178 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
CELF1-221ENST00000543178 STRN4Q9NRL3 753 aa13.02□□□□□ -0.33
CELF1-221ENST00000543178 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
CELF1-221ENST00000543178 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
CELF1-221ENST00000543178 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
CELF1-221ENST00000543178 BRWD3Q6RI45 1802 aa13.02□□□□□ -0.33
CELF1-221ENST00000543178 ERBB3P21860 1342 aa13.01□□□□□ -0.33
CELF1-221ENST00000543178 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
CELF1-221ENST00000543178 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
CELF1-221ENST00000543178 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
CELF1-221ENST00000543178 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
CELF1-221ENST00000543178 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
CELF1-221ENST00000543178 FBLN1P23142 703 aa12.99□□□□□ -0.33
CELF1-221ENST00000543178 HOXC9P31274 260 aa12.99□□□□□ -0.33
CELF1-221ENST00000543178 PARP4Q9UKK3 1724 aaKnown RBP12.99□□□□□ -0.33
CELF1-221ENST00000543178 INSRP06213 1382 aa12.98□□□□□ -0.33
CELF1-221ENST00000543178 FLT4P35916 1363 aa12.98□□□□□ -0.33
CELF1-221ENST00000543178 AMPHP49418 695 aa12.98□□□□□ -0.33
CELF1-221ENST00000543178 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
CELF1-221ENST00000543178 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
CELF1-221ENST00000543178 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
CELF1-221ENST00000543178 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
CELF1-221ENST00000543178 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
CELF1-221ENST00000543178 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
CELF1-221ENST00000543178 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
CELF1-221ENST00000543178 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
CELF1-221ENST00000543178 CSB-PGBD3P0DP91 1061 aa12.96□□□□□ -0.33
CELF1-221ENST00000543178 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
CELF1-221ENST00000543178 DISP2A7MBM2 1401 aa12.96□□□□□ -0.34
CELF1-221ENST00000543178 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
CELF1-221ENST00000543178 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
CELF1-221ENST00000543178 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
CELF1-221ENST00000543178 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
CELF1-221ENST00000543178 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
CELF1-221ENST00000543178 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
CELF1-221ENST00000543178 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
CELF1-221ENST00000543178 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
CELF1-221ENST00000543178 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
CELF1-221ENST00000543178 EP400Q96L91 3159 aa12.91□□□□□ -0.34
CELF1-221ENST00000543178 A0A0G2JS52 829 aa12.9□□□□□ -0.34
CELF1-221ENST00000543178 IL2RBP14784 551 aa12.9□□□□□ -0.34
CELF1-221ENST00000543178 TNNT2P45379 298 aaPredicted RBP12.9□□□□□ -0.34
CELF1-221ENST00000543178 MYT1Q01538 1121 aa12.9□□□□□ -0.34
CELF1-221ENST00000543178 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
CELF1-221ENST00000543178 CCDC125Q86Z20 511 aa12.9□□□□□ -0.34
CELF1-221ENST00000543178 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
CELF1-221ENST00000543178 BCL9O00512 1426 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 DDB1Q16531 1140 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
CELF1-221ENST00000543178 EXOC5O00471 708 aa12.88□□□□□ -0.35
CELF1-221ENST00000543178 PPM1GO15355 546 aaPredicted RBP12.88□□□□□ -0.35
CELF1-221ENST00000543178 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
CELF1-221ENST00000543178 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
CELF1-221ENST00000543178 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
CELF1-221ENST00000543178 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
CELF1-221ENST00000543178 RGPD1P0DJD0 1748 aa12.87□□□□□ -0.35
CELF1-221ENST00000543178 MTHFSP49914 203 aa12.86□□□□□ -0.35
CELF1-221ENST00000543178 EYA1Q99502 592 aa12.86□□□□□ -0.35
CELF1-221ENST00000543178 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
CELF1-221ENST00000543178 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
CELF1-221ENST00000543178 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
CELF1-221ENST00000543178 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
CELF1-221ENST00000543178 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
CELF1-221ENST00000543178 MEGF6O75095 1541 aa12.84□□□□□ -0.35
CELF1-221ENST00000543178 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
CELF1-221ENST00000543178 IL13P35225 146 aa12.84□□□□□ -0.35
CELF1-221ENST00000543178 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
CELF1-221ENST00000543178 PKD1L3Q7Z443 1732 aa12.84□□□□□ -0.35
CELF1-221ENST00000543178 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
CELF1-221ENST00000543178 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
CELF1-221ENST00000543178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■□□□□ 8.6
CELF1-221ENST00000543178 COL3A1P02461 1466 aaPredicted RBP12.83□□□□□ -0.36
CELF1-221ENST00000543178 KDRP35968 1356 aa12.82□□□□□ -0.36
CELF1-221ENST00000543178 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms